PATHWAY: nmk01100 Help Entry nmk01100                    Pathway                                 Name Metabolic pathways - Neobacillus mesonae Class BRITE hierarchy Pathway map nmk01100   Metabolic pathways Module nmk_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nmk01100] nmk_M00002   Glycolysis, core module involving three-carbon compounds [PATH:nmk01100] nmk_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:nmk01100] nmk_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:nmk01100] nmk_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:nmk01100] nmk_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:nmk01100] nmk_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:nmk01100] nmk_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:nmk01100] nmk_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:nmk01100] nmk_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:nmk01100] nmk_M00012   Glyoxylate cycle [PATH:nmk01100] nmk_M00015   Proline biosynthesis, glutamate => proline [PATH:nmk01100] nmk_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:nmk01100] nmk_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:nmk01100] nmk_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:nmk01100] nmk_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:nmk01100] nmk_M00021   Cysteine biosynthesis, serine => cysteine [PATH:nmk01100] nmk_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:nmk01100] nmk_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:nmk01100] nmk_M00026   Histidine biosynthesis, PRPP => histidine [PATH:nmk01100] nmk_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:nmk01100] nmk_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:nmk01100] nmk_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:nmk01100] nmk_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:nmk01100] nmk_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nmk01100] nmk_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:nmk01100] nmk_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nmk01100] nmk_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nmk01100] nmk_M00082   Fatty acid biosynthesis, initiation [PATH:nmk01100] nmk_M00083   Fatty acid biosynthesis, elongation [PATH:nmk01100] nmk_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:nmk01100] nmk_M00087   beta-Oxidation [PATH:nmk01100] nmk_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:nmk01100] nmk_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:nmk01100] nmk_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:nmk01100] nmk_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:nmk01100] nmk_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:nmk01100] nmk_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:nmk01100] nmk_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:nmk01100] nmk_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:nmk01100] nmk_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:nmk01100] nmk_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:nmk01100] nmk_M00140   C1-unit interconversion, prokaryotes [PATH:nmk01100] nmk_M00151   Cytochrome bc1 complex respiratory unit [PATH:nmk01100] nmk_M00155   Cytochrome c oxidase, prokaryotes [PATH:nmk01100] nmk_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:nmk01100] nmk_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:nmk01100] nmk_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nmk01100] nmk_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:nmk01100] nmk_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:nmk01100] nmk_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:nmk01100] nmk_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:nmk01100] nmk_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:nmk01100] nmk_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:nmk01100] nmk_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:nmk01100] nmk_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:nmk01100] nmk_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:nmk01100] nmk_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:nmk01100] nmk_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:nmk01100] nmk_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:nmk01100] nmk_M00621   Glycine cleavage system [PATH:nmk01100] nmk_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:nmk01100] nmk_M00844   Arginine biosynthesis, ornithine => arginine [PATH:nmk01100] nmk_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:nmk01100] nmk_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:nmk01100] nmk_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:nmk01100] nmk_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:nmk01100] nmk_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:nmk01100] nmk_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:nmk01100] nmk_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:nmk01100] nmk_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:nmk01100] nmk_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nmk01100] nmk_M00970   Proline degradation, proline => glutamate [PATH:nmk01100] nmk_M00972   Proline metabolism [PATH:nmk01100] Organism Neobacillus mesonae [GN:nmk] Related pathway nmk00010   Glycolysis / Gluconeogenesis nmk00020   Citrate cycle (TCA cycle) nmk00030   Pentose phosphate pathway nmk00040   Pentose and glucuronate interconversions nmk00051   Fructose and mannose metabolism nmk00052   Galactose metabolism nmk00053   Ascorbate and aldarate metabolism nmk00061   Fatty acid biosynthesis nmk00071   Fatty acid degradation nmk00074   Mycolic acid biosynthesis nmk00130   Ubiquinone and other terpenoid-quinone biosynthesis nmk00190   Oxidative phosphorylation nmk00220   Arginine biosynthesis nmk00230   Purine metabolism nmk00240   Pyrimidine metabolism nmk00250   Alanine, aspartate and glutamate metabolism nmk00260   Glycine, serine and threonine metabolism nmk00261   Monobactam biosynthesis nmk00270   Cysteine and methionine metabolism nmk00280   Valine, leucine and isoleucine degradation nmk00290   Valine, leucine and isoleucine biosynthesis nmk00300   Lysine biosynthesis nmk00310   Lysine degradation nmk00311   Penicillin and cephalosporin biosynthesis nmk00330   Arginine and proline metabolism nmk00332   Carbapenem biosynthesis nmk00340   Histidine metabolism nmk00350   Tyrosine metabolism nmk00360   Phenylalanine metabolism nmk00361   Chlorocyclohexane and chlorobenzene degradation nmk00362   Benzoate degradation nmk00380   Tryptophan metabolism nmk00400   Phenylalanine, tyrosine and tryptophan biosynthesis nmk00401   Novobiocin biosynthesis nmk00410   beta-Alanine metabolism nmk00430   Taurine and hypotaurine metabolism nmk00440   Phosphonate and phosphinate metabolism nmk00450   Selenocompound metabolism nmk00460   Cyanoamino acid metabolism nmk00470   D-Amino acid metabolism nmk00480   Glutathione metabolism nmk00500   Starch and sucrose metabolism nmk00511   Other glycan degradation nmk00520   Amino sugar and nucleotide sugar metabolism nmk00521   Streptomycin biosynthesis nmk00541   O-Antigen nucleotide sugar biosynthesis nmk00542   O-Antigen repeat unit biosynthesis nmk00543   Exopolysaccharide biosynthesis nmk00550   Peptidoglycan biosynthesis nmk00552   Teichoic acid biosynthesis nmk00561   Glycerolipid metabolism nmk00562   Inositol phosphate metabolism nmk00564   Glycerophospholipid metabolism nmk00592   alpha-Linolenic acid metabolism nmk00600   Sphingolipid metabolism nmk00620   Pyruvate metabolism nmk00621   Dioxin degradation nmk00622   Xylene degradation nmk00625   Chloroalkane and chloroalkene degradation nmk00626   Naphthalene degradation nmk00627   Aminobenzoate degradation nmk00630   Glyoxylate and dicarboxylate metabolism nmk00640   Propanoate metabolism nmk00643   Styrene degradation nmk00650   Butanoate metabolism nmk00660   C5-Branched dibasic acid metabolism nmk00670   One carbon pool by folate nmk00680   Methane metabolism nmk00710   Carbon fixation by Calvin cycle nmk00720   Other carbon fixation pathways nmk00730   Thiamine metabolism nmk00740   Riboflavin metabolism nmk00750   Vitamin B6 metabolism nmk00760   Nicotinate and nicotinamide metabolism nmk00770   Pantothenate and CoA biosynthesis nmk00780   Biotin metabolism nmk00785   Lipoic acid metabolism nmk00790   Folate biosynthesis nmk00860   Porphyrin metabolism nmk00900   Terpenoid backbone biosynthesis nmk00907   Pinene, camphor and geraniol degradation nmk00910   Nitrogen metabolism nmk00920   Sulfur metabolism nmk00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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