KEGG   PATHWAY: oca01100
Entry
oca01100                    Pathway                                
Name
Metabolic pathways - Afipia carboxidovorans OM5 (Mississippi)
Class
Pathway map
oca01100  Metabolic pathways
oca01100

Module
oca_M00002  Glycolysis, core module involving three-carbon compounds [PATH:oca01100]
oca_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:oca01100]
oca_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:oca01100]
oca_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:oca01100]
oca_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:oca01100]
oca_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:oca01100]
oca_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:oca01100]
oca_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:oca01100]
oca_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:oca01100]
oca_M00012  Glyoxylate cycle [PATH:oca01100]
oca_M00015  Proline biosynthesis, glutamate => proline [PATH:oca01100]
oca_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:oca01100]
oca_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:oca01100]
oca_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:oca01100]
oca_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:oca01100]
oca_M00021  Cysteine biosynthesis, serine => cysteine [PATH:oca01100]
oca_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:oca01100]
oca_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:oca01100]
oca_M00026  Histidine biosynthesis, PRPP => histidine [PATH:oca01100]
oca_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:oca01100]
oca_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:oca01100]
oca_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:oca01100]
oca_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:oca01100]
oca_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:oca01100]
oca_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:oca01100]
oca_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:oca01100]
oca_M00082  Fatty acid biosynthesis, initiation [PATH:oca01100]
oca_M00083  Fatty acid biosynthesis, elongation [PATH:oca01100]
oca_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:oca01100]
oca_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:oca01100]
oca_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:oca01100]
oca_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:oca01100]
oca_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:oca01100]
oca_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:oca01100]
oca_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:oca01100]
oca_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:oca01100]
oca_M00149  Succinate dehydrogenase, prokaryotes [PATH:oca01100]
oca_M00151  Cytochrome bc1 complex respiratory unit [PATH:oca01100]
oca_M00155  Cytochrome c oxidase, prokaryotes [PATH:oca01100]
oca_M00156  Cytochrome c oxidase, cbb3-type [PATH:oca01100]
oca_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:oca01100]
oca_M00168  CAM (Crassulacean acid metabolism), dark [PATH:oca01100]
oca_M00169  CAM (Crassulacean acid metabolism), light [PATH:oca01100]
oca_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:oca01100]
oca_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:oca01100]
oca_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:oca01100]
oca_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:oca01100]
oca_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:oca01100]
oca_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:oca01100]
oca_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:oca01100]
oca_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:oca01100]
oca_M00621  Glycine cleavage system [PATH:oca01100]
oca_M00793  dTDP-L-rhamnose biosynthesis [PATH:oca01100]
oca_M00844  Arginine biosynthesis, ornithine => arginine [PATH:oca01100]
oca_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:oca01100]
oca_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:oca01100]
oca_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:oca01100]
oca_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:oca01100]
oca_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:oca01100]
oca_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:oca01100]
oca_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:oca01100]
oca_M00970  Proline degradation, proline => glutamate [PATH:oca01100]
Organism
Afipia carboxidovorans OM5 (Mississippi) [GN:oca]
Related
pathway
oca00010  Glycolysis / Gluconeogenesis
oca00020  Citrate cycle (TCA cycle)
oca00030  Pentose phosphate pathway
oca00040  Pentose and glucuronate interconversions
oca00051  Fructose and mannose metabolism
oca00052  Galactose metabolism
oca00053  Ascorbate and aldarate metabolism
oca00061  Fatty acid biosynthesis
oca00071  Fatty acid degradation
oca00074  Mycolic acid biosynthesis
oca00130  Ubiquinone and other terpenoid-quinone biosynthesis
oca00190  Oxidative phosphorylation
oca00220  Arginine biosynthesis
oca00230  Purine metabolism
oca00240  Pyrimidine metabolism
oca00250  Alanine, aspartate and glutamate metabolism
oca00260  Glycine, serine and threonine metabolism
oca00261  Monobactam biosynthesis
oca00270  Cysteine and methionine metabolism
oca00280  Valine, leucine and isoleucine degradation
oca00290  Valine, leucine and isoleucine biosynthesis
oca00300  Lysine biosynthesis
oca00310  Lysine degradation
oca00330  Arginine and proline metabolism
oca00332  Carbapenem biosynthesis
oca00340  Histidine metabolism
oca00350  Tyrosine metabolism
oca00360  Phenylalanine metabolism
oca00361  Chlorocyclohexane and chlorobenzene degradation
oca00362  Benzoate degradation
oca00364  Fluorobenzoate degradation
oca00380  Tryptophan metabolism
oca00400  Phenylalanine, tyrosine and tryptophan biosynthesis
oca00401  Novobiocin biosynthesis
oca00410  beta-Alanine metabolism
oca00430  Taurine and hypotaurine metabolism
oca00440  Phosphonate and phosphinate metabolism
oca00450  Selenocompound metabolism
oca00460  Cyanoamino acid metabolism
oca00470  D-Amino acid metabolism
oca00480  Glutathione metabolism
oca00500  Starch and sucrose metabolism
oca00520  Amino sugar and nucleotide sugar metabolism
oca00521  Streptomycin biosynthesis
oca00523  Polyketide sugar unit biosynthesis
oca00525  Acarbose and validamycin biosynthesis
oca00540  Lipopolysaccharide biosynthesis
oca00541  O-Antigen nucleotide sugar biosynthesis
oca00543  Exopolysaccharide biosynthesis
oca00550  Peptidoglycan biosynthesis
oca00552  Teichoic acid biosynthesis
oca00561  Glycerolipid metabolism
oca00562  Inositol phosphate metabolism
oca00564  Glycerophospholipid metabolism
oca00620  Pyruvate metabolism
oca00621  Dioxin degradation
oca00622  Xylene degradation
oca00623  Toluene degradation
oca00625  Chloroalkane and chloroalkene degradation
oca00626  Naphthalene degradation
oca00627  Aminobenzoate degradation
oca00630  Glyoxylate and dicarboxylate metabolism
oca00640  Propanoate metabolism
oca00643  Styrene degradation
oca00650  Butanoate metabolism
oca00660  C5-Branched dibasic acid metabolism
oca00670  One carbon pool by folate
oca00680  Methane metabolism
oca00710  Carbon fixation by Calvin cycle
oca00720  Other carbon fixation pathways
oca00730  Thiamine metabolism
oca00740  Riboflavin metabolism
oca00750  Vitamin B6 metabolism
oca00760  Nicotinate and nicotinamide metabolism
oca00770  Pantothenate and CoA biosynthesis
oca00780  Biotin metabolism
oca00785  Lipoic acid metabolism
oca00790  Folate biosynthesis
oca00860  Porphyrin metabolism
oca00900  Terpenoid backbone biosynthesis
oca00906  Carotenoid biosynthesis
oca00907  Pinene, camphor and geraniol degradation
oca00909  Sesquiterpenoid and triterpenoid biosynthesis
oca00910  Nitrogen metabolism
oca00920  Sulfur metabolism
oca00930  Caprolactam degradation
oca00999  Biosynthesis of various plant secondary metabolites
oca01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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