PATHWAY: oce01100 Help Entry oce01100                    Pathway                                 Name Metabolic pathways - Oceanimonas sp. GK1 Class BRITE hierarchy Pathway map oce01100   Metabolic pathways Module oce_M00002   Glycolysis, core module involving three-carbon compounds [PATH:oce01100] oce_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:oce01100] oce_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:oce01100] oce_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:oce01100] oce_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:oce01100] oce_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:oce01100] oce_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:oce01100] oce_M00012   Glyoxylate cycle [PATH:oce01100] oce_M00015   Proline biosynthesis, glutamate => proline [PATH:oce01100] oce_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:oce01100] oce_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:oce01100] oce_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:oce01100] oce_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:oce01100] oce_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:oce01100] oce_M00021   Cysteine biosynthesis, serine => cysteine [PATH:oce01100] oce_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:oce01100] oce_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:oce01100] oce_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:oce01100] oce_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:oce01100] oce_M00026   Histidine biosynthesis, PRPP => histidine [PATH:oce01100] oce_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:oce01100] oce_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:oce01100] oce_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:oce01100] oce_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:oce01100] oce_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:oce01100] oce_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:oce01100] oce_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:oce01100] oce_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:oce01100] oce_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:oce01100] oce_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:oce01100] oce_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:oce01100] oce_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:oce01100] oce_M00063   CMP-KDO biosynthesis [PATH:oce01100] oce_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:oce01100] oce_M00082   Fatty acid biosynthesis, initiation [PATH:oce01100] oce_M00083   Fatty acid biosynthesis, elongation [PATH:oce01100] oce_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:oce01100] oce_M00087   beta-Oxidation [PATH:oce01100] oce_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:oce01100] oce_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:oce01100] oce_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:oce01100] oce_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:oce01100] oce_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:oce01100] oce_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:oce01100] oce_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:oce01100] oce_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:oce01100] oce_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:oce01100] oce_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:oce01100] oce_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:oce01100] oce_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:oce01100] oce_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:oce01100] oce_M00149   Succinate dehydrogenase, prokaryotes [PATH:oce01100] oce_M00151   Cytochrome bc1 complex respiratory unit [PATH:oce01100] oce_M00155   Cytochrome c oxidase, prokaryotes [PATH:oce01100] oce_M00156   Cytochrome c oxidase, cbb3-type [PATH:oce01100] oce_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:oce01100] oce_M00168   CAM (Crassulacean acid metabolism), dark [PATH:oce01100] oce_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:oce01100] oce_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:oce01100] oce_M00417   Cytochrome o ubiquinol oxidase [PATH:oce01100] oce_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:oce01100] oce_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:oce01100] oce_M00555   Betaine biosynthesis, choline => betaine [PATH:oce01100] oce_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:oce01100] oce_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:oce01100] oce_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:oce01100] oce_M00621   Glycine cleavage system [PATH:oce01100] oce_M00793   dTDP-L-rhamnose biosynthesis [PATH:oce01100] oce_M00844   Arginine biosynthesis, ornithine => arginine [PATH:oce01100] oce_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:oce01100] oce_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:oce01100] oce_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:oce01100] oce_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:oce01100] oce_M00919   Ectoine degradation, ectoine => aspartate [PATH:oce01100] oce_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:oce01100] oce_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:oce01100] oce_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:oce01100] oce_M00970   Proline degradation, proline => glutamate [PATH:oce01100] oce_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:oce01100] Organism Oceanimonas sp. GK1 [GN:oce] Related pathway oce00010   Glycolysis / Gluconeogenesis oce00020   Citrate cycle (TCA cycle) oce00030   Pentose phosphate pathway oce00040   Pentose and glucuronate interconversions oce00051   Fructose and mannose metabolism oce00052   Galactose metabolism oce00061   Fatty acid biosynthesis oce00071   Fatty acid degradation oce00121   Secondary bile acid biosynthesis oce00130   Ubiquinone and other terpenoid-quinone biosynthesis oce00190   Oxidative phosphorylation oce00220   Arginine biosynthesis oce00230   Purine metabolism oce00240   Pyrimidine metabolism oce00250   Alanine, aspartate and glutamate metabolism oce00260   Glycine, serine and threonine metabolism oce00261   Monobactam biosynthesis oce00270   Cysteine and methionine metabolism oce00280   Valine, leucine and isoleucine degradation oce00290   Valine, leucine and isoleucine biosynthesis oce00300   Lysine biosynthesis oce00310   Lysine degradation oce00330   Arginine and proline metabolism oce00332   Carbapenem biosynthesis oce00340   Histidine metabolism oce00350   Tyrosine metabolism oce00360   Phenylalanine metabolism oce00361   Chlorocyclohexane and chlorobenzene degradation oce00362   Benzoate degradation oce00364   Fluorobenzoate degradation oce00380   Tryptophan metabolism oce00400   Phenylalanine, tyrosine and tryptophan biosynthesis oce00401   Novobiocin biosynthesis oce00410   beta-Alanine metabolism oce00430   Taurine and hypotaurine metabolism oce00440   Phosphonate and phosphinate metabolism oce00450   Selenocompound metabolism oce00460   Cyanoamino acid metabolism oce00470   D-Amino acid metabolism oce00480   Glutathione metabolism oce00500   Starch and sucrose metabolism oce00520   Amino sugar and nucleotide sugar metabolism oce00521   Streptomycin biosynthesis oce00523   Polyketide sugar unit biosynthesis oce00525   Acarbose and validamycin biosynthesis oce00540   Lipopolysaccharide biosynthesis oce00541   O-Antigen nucleotide sugar biosynthesis oce00543   Exopolysaccharide biosynthesis oce00550   Peptidoglycan biosynthesis oce00552   Teichoic acid biosynthesis oce00561   Glycerolipid metabolism oce00562   Inositol phosphate metabolism oce00564   Glycerophospholipid metabolism oce00592   alpha-Linolenic acid metabolism oce00620   Pyruvate metabolism oce00621   Dioxin degradation oce00622   Xylene degradation oce00623   Toluene degradation oce00625   Chloroalkane and chloroalkene degradation oce00626   Naphthalene degradation oce00627   Aminobenzoate degradation oce00630   Glyoxylate and dicarboxylate metabolism oce00633   Nitrotoluene degradation oce00640   Propanoate metabolism oce00643   Styrene degradation oce00650   Butanoate metabolism oce00660   C5-Branched dibasic acid metabolism oce00670   One carbon pool by folate oce00680   Methane metabolism oce00710   Carbon fixation by Calvin cycle oce00720   Other carbon fixation pathways oce00730   Thiamine metabolism oce00740   Riboflavin metabolism oce00750   Vitamin B6 metabolism oce00760   Nicotinate and nicotinamide metabolism oce00770   Pantothenate and CoA biosynthesis oce00780   Biotin metabolism oce00785   Lipoic acid metabolism oce00790   Folate biosynthesis oce00860   Porphyrin metabolism oce00900   Terpenoid backbone biosynthesis oce00907   Pinene, camphor and geraniol degradation oce00910   Nitrogen metabolism oce00920   Sulfur metabolism oce00930   Caprolactam degradation oce00946   Degradation of flavonoids oce00999   Biosynthesis of various plant secondary metabolites oce01040   Biosynthesis of unsaturated fatty acids oce01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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