PATHWAY: ocm01100 Help Entry ocm01100                    Pathway                                 Name Metabolic pathways - Oceanisphaera avium Class BRITE hierarchy Pathway map ocm01100   Metabolic pathways Module ocm_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ocm01100] ocm_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ocm01100] ocm_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ocm01100] ocm_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ocm01100] ocm_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ocm01100] ocm_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ocm01100] ocm_M00012   Glyoxylate cycle [PATH:ocm01100] ocm_M00015   Proline biosynthesis, glutamate => proline [PATH:ocm01100] ocm_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ocm01100] ocm_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ocm01100] ocm_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ocm01100] ocm_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ocm01100] ocm_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ocm01100] ocm_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ocm01100] ocm_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ocm01100] ocm_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ocm01100] ocm_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ocm01100] ocm_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ocm01100] ocm_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ocm01100] ocm_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:ocm01100] ocm_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ocm01100] ocm_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ocm01100] ocm_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ocm01100] ocm_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ocm01100] ocm_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ocm01100] ocm_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ocm01100] ocm_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ocm01100] ocm_M00063   CMP-KDO biosynthesis [PATH:ocm01100] ocm_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ocm01100] ocm_M00082   Fatty acid biosynthesis, initiation [PATH:ocm01100] ocm_M00083   Fatty acid biosynthesis, elongation [PATH:ocm01100] ocm_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ocm01100] ocm_M00087   beta-Oxidation [PATH:ocm01100] ocm_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ocm01100] ocm_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ocm01100] ocm_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ocm01100] ocm_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ocm01100] ocm_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ocm01100] ocm_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ocm01100] ocm_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ocm01100] ocm_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ocm01100] ocm_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ocm01100] ocm_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ocm01100] ocm_M00149   Succinate dehydrogenase, prokaryotes [PATH:ocm01100] ocm_M00151   Cytochrome bc1 complex respiratory unit [PATH:ocm01100] ocm_M00156   Cytochrome c oxidase, cbb3-type [PATH:ocm01100] ocm_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ocm01100] ocm_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ocm01100] ocm_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ocm01100] ocm_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ocm01100] ocm_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ocm01100] ocm_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:ocm01100] ocm_M00529   Denitrification, nitrate => nitrogen [PATH:ocm01100] ocm_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ocm01100] ocm_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ocm01100] ocm_M00793   dTDP-L-rhamnose biosynthesis [PATH:ocm01100] ocm_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ocm01100] ocm_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ocm01100] ocm_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ocm01100] ocm_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ocm01100] ocm_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ocm01100] ocm_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ocm01100] ocm_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ocm01100] ocm_M00970   Proline degradation, proline => glutamate [PATH:ocm01100] Organism Oceanisphaera avium [GN:ocm] Related pathway ocm00010   Glycolysis / Gluconeogenesis ocm00020   Citrate cycle (TCA cycle) ocm00030   Pentose phosphate pathway ocm00040   Pentose and glucuronate interconversions ocm00051   Fructose and mannose metabolism ocm00052   Galactose metabolism ocm00061   Fatty acid biosynthesis ocm00071   Fatty acid degradation ocm00121   Secondary bile acid biosynthesis ocm00130   Ubiquinone and other terpenoid-quinone biosynthesis ocm00190   Oxidative phosphorylation ocm00220   Arginine biosynthesis ocm00230   Purine metabolism ocm00240   Pyrimidine metabolism ocm00250   Alanine, aspartate and glutamate metabolism ocm00260   Glycine, serine and threonine metabolism ocm00261   Monobactam biosynthesis ocm00270   Cysteine and methionine metabolism ocm00280   Valine, leucine and isoleucine degradation ocm00290   Valine, leucine and isoleucine biosynthesis ocm00300   Lysine biosynthesis ocm00310   Lysine degradation ocm00330   Arginine and proline metabolism ocm00332   Carbapenem biosynthesis ocm00340   Histidine metabolism ocm00350   Tyrosine metabolism ocm00360   Phenylalanine metabolism ocm00362   Benzoate degradation ocm00380   Tryptophan metabolism ocm00400   Phenylalanine, tyrosine and tryptophan biosynthesis ocm00401   Novobiocin biosynthesis ocm00410   beta-Alanine metabolism ocm00430   Taurine and hypotaurine metabolism ocm00450   Selenocompound metabolism ocm00460   Cyanoamino acid metabolism ocm00470   D-Amino acid metabolism ocm00480   Glutathione metabolism ocm00500   Starch and sucrose metabolism ocm00520   Amino sugar and nucleotide sugar metabolism ocm00521   Streptomycin biosynthesis ocm00523   Polyketide sugar unit biosynthesis ocm00525   Acarbose and validamycin biosynthesis ocm00540   Lipopolysaccharide biosynthesis ocm00541   O-Antigen nucleotide sugar biosynthesis ocm00543   Exopolysaccharide biosynthesis ocm00550   Peptidoglycan biosynthesis ocm00552   Teichoic acid biosynthesis ocm00561   Glycerolipid metabolism ocm00562   Inositol phosphate metabolism ocm00564   Glycerophospholipid metabolism ocm00592   alpha-Linolenic acid metabolism ocm00620   Pyruvate metabolism ocm00630   Glyoxylate and dicarboxylate metabolism ocm00640   Propanoate metabolism ocm00650   Butanoate metabolism ocm00660   C5-Branched dibasic acid metabolism ocm00670   One carbon pool by folate ocm00680   Methane metabolism ocm00710   Carbon fixation by Calvin cycle ocm00720   Other carbon fixation pathways ocm00730   Thiamine metabolism ocm00740   Riboflavin metabolism ocm00750   Vitamin B6 metabolism ocm00760   Nicotinate and nicotinamide metabolism ocm00770   Pantothenate and CoA biosynthesis ocm00780   Biotin metabolism ocm00785   Lipoic acid metabolism ocm00790   Folate biosynthesis ocm00860   Porphyrin metabolism ocm00900   Terpenoid backbone biosynthesis ocm00903   Limonene degradation ocm00907   Pinene, camphor and geraniol degradation ocm00910   Nitrogen metabolism ocm00920   Sulfur metabolism ocm00930   Caprolactam degradation ocm00999   Biosynthesis of various plant secondary metabolites ocm01040   Biosynthesis of unsaturated fatty acids ocm01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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