KEGG   PATHWAY: oco01100
Entry
oco01100                    Pathway                                
Name
Metabolic pathways - Afipia carboxidovorans OM4
Class
Pathway map
oco01100  Metabolic pathways
oco01100

Module
oco_M00002  Glycolysis, core module involving three-carbon compounds [PATH:oco01100]
oco_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:oco01100]
oco_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:oco01100]
oco_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:oco01100]
oco_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:oco01100]
oco_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:oco01100]
oco_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:oco01100]
oco_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:oco01100]
oco_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:oco01100]
oco_M00012  Glyoxylate cycle [PATH:oco01100]
oco_M00015  Proline biosynthesis, glutamate => proline [PATH:oco01100]
oco_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:oco01100]
oco_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:oco01100]
oco_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:oco01100]
oco_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:oco01100]
oco_M00021  Cysteine biosynthesis, serine => cysteine [PATH:oco01100]
oco_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:oco01100]
oco_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:oco01100]
oco_M00026  Histidine biosynthesis, PRPP => histidine [PATH:oco01100]
oco_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:oco01100]
oco_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:oco01100]
oco_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:oco01100]
oco_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:oco01100]
oco_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:oco01100]
oco_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:oco01100]
oco_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:oco01100]
oco_M00082  Fatty acid biosynthesis, initiation [PATH:oco01100]
oco_M00083  Fatty acid biosynthesis, elongation [PATH:oco01100]
oco_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:oco01100]
oco_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:oco01100]
oco_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:oco01100]
oco_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:oco01100]
oco_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:oco01100]
oco_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:oco01100]
oco_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:oco01100]
oco_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:oco01100]
oco_M00149  Succinate dehydrogenase, prokaryotes [PATH:oco01100]
oco_M00151  Cytochrome bc1 complex respiratory unit [PATH:oco01100]
oco_M00155  Cytochrome c oxidase, prokaryotes [PATH:oco01100]
oco_M00156  Cytochrome c oxidase, cbb3-type [PATH:oco01100]
oco_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:oco01100]
oco_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:oco01100]
oco_M00168  CAM (Crassulacean acid metabolism), dark [PATH:oco01100]
oco_M00169  CAM (Crassulacean acid metabolism), light [PATH:oco01100]
oco_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:oco01100]
oco_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:oco01100]
oco_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:oco01100]
oco_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:oco01100]
oco_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:oco01100]
oco_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:oco01100]
oco_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:oco01100]
oco_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:oco01100]
oco_M00621  Glycine cleavage system [PATH:oco01100]
oco_M00793  dTDP-L-rhamnose biosynthesis [PATH:oco01100]
oco_M00844  Arginine biosynthesis, ornithine => arginine [PATH:oco01100]
oco_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:oco01100]
oco_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:oco01100]
oco_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:oco01100]
oco_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:oco01100]
oco_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:oco01100]
oco_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:oco01100]
oco_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:oco01100]
oco_M00970  Proline degradation, proline => glutamate [PATH:oco01100]
Organism
Afipia carboxidovorans OM4 [GN:oco]
Related
pathway
oco00010  Glycolysis / Gluconeogenesis
oco00020  Citrate cycle (TCA cycle)
oco00030  Pentose phosphate pathway
oco00040  Pentose and glucuronate interconversions
oco00051  Fructose and mannose metabolism
oco00052  Galactose metabolism
oco00053  Ascorbate and aldarate metabolism
oco00061  Fatty acid biosynthesis
oco00071  Fatty acid degradation
oco00074  Mycolic acid biosynthesis
oco00130  Ubiquinone and other terpenoid-quinone biosynthesis
oco00190  Oxidative phosphorylation
oco00220  Arginine biosynthesis
oco00230  Purine metabolism
oco00240  Pyrimidine metabolism
oco00250  Alanine, aspartate and glutamate metabolism
oco00260  Glycine, serine and threonine metabolism
oco00261  Monobactam biosynthesis
oco00270  Cysteine and methionine metabolism
oco00280  Valine, leucine and isoleucine degradation
oco00290  Valine, leucine and isoleucine biosynthesis
oco00300  Lysine biosynthesis
oco00310  Lysine degradation
oco00330  Arginine and proline metabolism
oco00332  Carbapenem biosynthesis
oco00340  Histidine metabolism
oco00350  Tyrosine metabolism
oco00360  Phenylalanine metabolism
oco00361  Chlorocyclohexane and chlorobenzene degradation
oco00362  Benzoate degradation
oco00364  Fluorobenzoate degradation
oco00380  Tryptophan metabolism
oco00400  Phenylalanine, tyrosine and tryptophan biosynthesis
oco00401  Novobiocin biosynthesis
oco00410  beta-Alanine metabolism
oco00430  Taurine and hypotaurine metabolism
oco00440  Phosphonate and phosphinate metabolism
oco00450  Selenocompound metabolism
oco00460  Cyanoamino acid metabolism
oco00470  D-Amino acid metabolism
oco00480  Glutathione metabolism
oco00500  Starch and sucrose metabolism
oco00520  Amino sugar and nucleotide sugar metabolism
oco00521  Streptomycin biosynthesis
oco00523  Polyketide sugar unit biosynthesis
oco00525  Acarbose and validamycin biosynthesis
oco00540  Lipopolysaccharide biosynthesis
oco00541  O-Antigen nucleotide sugar biosynthesis
oco00543  Exopolysaccharide biosynthesis
oco00550  Peptidoglycan biosynthesis
oco00552  Teichoic acid biosynthesis
oco00561  Glycerolipid metabolism
oco00562  Inositol phosphate metabolism
oco00564  Glycerophospholipid metabolism
oco00620  Pyruvate metabolism
oco00621  Dioxin degradation
oco00622  Xylene degradation
oco00623  Toluene degradation
oco00625  Chloroalkane and chloroalkene degradation
oco00626  Naphthalene degradation
oco00627  Aminobenzoate degradation
oco00630  Glyoxylate and dicarboxylate metabolism
oco00640  Propanoate metabolism
oco00643  Styrene degradation
oco00650  Butanoate metabolism
oco00660  C5-Branched dibasic acid metabolism
oco00670  One carbon pool by folate
oco00680  Methane metabolism
oco00710  Carbon fixation by Calvin cycle
oco00720  Other carbon fixation pathways
oco00730  Thiamine metabolism
oco00740  Riboflavin metabolism
oco00750  Vitamin B6 metabolism
oco00760  Nicotinate and nicotinamide metabolism
oco00770  Pantothenate and CoA biosynthesis
oco00780  Biotin metabolism
oco00785  Lipoic acid metabolism
oco00790  Folate biosynthesis
oco00860  Porphyrin metabolism
oco00900  Terpenoid backbone biosynthesis
oco00906  Carotenoid biosynthesis
oco00907  Pinene, camphor and geraniol degradation
oco00909  Sesquiterpenoid and triterpenoid biosynthesis
oco00910  Nitrogen metabolism
oco00920  Sulfur metabolism
oco00930  Caprolactam degradation
oco00999  Biosynthesis of various plant secondary metabolites
oco01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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