PATHWAY: ope01100 Help Entry ope01100                    Pathway                                 Name Metabolic pathways - Oceanimonas pelagia Class BRITE hierarchy Pathway map ope01100   Metabolic pathways Module ope_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ope01100] ope_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ope01100] ope_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ope01100] ope_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ope01100] ope_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ope01100] ope_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ope01100] ope_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ope01100] ope_M00012   Glyoxylate cycle [PATH:ope01100] ope_M00015   Proline biosynthesis, glutamate => proline [PATH:ope01100] ope_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ope01100] ope_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ope01100] ope_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ope01100] ope_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ope01100] ope_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ope01100] ope_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ope01100] ope_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ope01100] ope_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ope01100] ope_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ope01100] ope_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ope01100] ope_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ope01100] ope_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:ope01100] ope_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ope01100] ope_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:ope01100] ope_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ope01100] ope_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ope01100] ope_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ope01100] ope_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ope01100] ope_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ope01100] ope_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ope01100] ope_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ope01100] ope_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ope01100] ope_M00063   CMP-KDO biosynthesis [PATH:ope01100] ope_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ope01100] ope_M00082   Fatty acid biosynthesis, initiation [PATH:ope01100] ope_M00083   Fatty acid biosynthesis, elongation [PATH:ope01100] ope_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ope01100] ope_M00087   beta-Oxidation [PATH:ope01100] ope_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ope01100] ope_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ope01100] ope_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ope01100] ope_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ope01100] ope_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ope01100] ope_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ope01100] ope_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ope01100] ope_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ope01100] ope_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ope01100] ope_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ope01100] ope_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ope01100] ope_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ope01100] ope_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ope01100] ope_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:ope01100] ope_M00149   Succinate dehydrogenase, prokaryotes [PATH:ope01100] ope_M00151   Cytochrome bc1 complex respiratory unit [PATH:ope01100] ope_M00155   Cytochrome c oxidase, prokaryotes [PATH:ope01100] ope_M00156   Cytochrome c oxidase, cbb3-type [PATH:ope01100] ope_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ope01100] ope_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ope01100] ope_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ope01100] ope_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ope01100] ope_M00417   Cytochrome o ubiquinol oxidase [PATH:ope01100] ope_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ope01100] ope_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:ope01100] ope_M00555   Betaine biosynthesis, choline => betaine [PATH:ope01100] ope_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ope01100] ope_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ope01100] ope_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ope01100] ope_M00621   Glycine cleavage system [PATH:ope01100] ope_M00793   dTDP-L-rhamnose biosynthesis [PATH:ope01100] ope_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ope01100] ope_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ope01100] ope_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ope01100] ope_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ope01100] ope_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:ope01100] ope_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ope01100] ope_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ope01100] ope_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ope01100] ope_M00970   Proline degradation, proline => glutamate [PATH:ope01100] ope_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:ope01100] Organism Oceanimonas pelagia [GN:ope] Related pathway ope00010   Glycolysis / Gluconeogenesis ope00020   Citrate cycle (TCA cycle) ope00030   Pentose phosphate pathway ope00040   Pentose and glucuronate interconversions ope00051   Fructose and mannose metabolism ope00052   Galactose metabolism ope00061   Fatty acid biosynthesis ope00071   Fatty acid degradation ope00121   Secondary bile acid biosynthesis ope00130   Ubiquinone and other terpenoid-quinone biosynthesis ope00190   Oxidative phosphorylation ope00220   Arginine biosynthesis ope00230   Purine metabolism ope00240   Pyrimidine metabolism ope00250   Alanine, aspartate and glutamate metabolism ope00260   Glycine, serine and threonine metabolism ope00261   Monobactam biosynthesis ope00270   Cysteine and methionine metabolism ope00280   Valine, leucine and isoleucine degradation ope00290   Valine, leucine and isoleucine biosynthesis ope00300   Lysine biosynthesis ope00310   Lysine degradation ope00330   Arginine and proline metabolism ope00332   Carbapenem biosynthesis ope00340   Histidine metabolism ope00350   Tyrosine metabolism ope00360   Phenylalanine metabolism ope00361   Chlorocyclohexane and chlorobenzene degradation ope00362   Benzoate degradation ope00364   Fluorobenzoate degradation ope00380   Tryptophan metabolism ope00400   Phenylalanine, tyrosine and tryptophan biosynthesis ope00401   Novobiocin biosynthesis ope00410   beta-Alanine metabolism ope00430   Taurine and hypotaurine metabolism ope00440   Phosphonate and phosphinate metabolism ope00450   Selenocompound metabolism ope00460   Cyanoamino acid metabolism ope00470   D-Amino acid metabolism ope00480   Glutathione metabolism ope00500   Starch and sucrose metabolism ope00520   Amino sugar and nucleotide sugar metabolism ope00521   Streptomycin biosynthesis ope00523   Polyketide sugar unit biosynthesis ope00525   Acarbose and validamycin biosynthesis ope00540   Lipopolysaccharide biosynthesis ope00541   O-Antigen nucleotide sugar biosynthesis ope00543   Exopolysaccharide biosynthesis ope00550   Peptidoglycan biosynthesis ope00552   Teichoic acid biosynthesis ope00561   Glycerolipid metabolism ope00562   Inositol phosphate metabolism ope00564   Glycerophospholipid metabolism ope00592   alpha-Linolenic acid metabolism ope00620   Pyruvate metabolism ope00621   Dioxin degradation ope00622   Xylene degradation ope00623   Toluene degradation ope00625   Chloroalkane and chloroalkene degradation ope00626   Naphthalene degradation ope00627   Aminobenzoate degradation ope00630   Glyoxylate and dicarboxylate metabolism ope00633   Nitrotoluene degradation ope00640   Propanoate metabolism ope00643   Styrene degradation ope00650   Butanoate metabolism ope00660   C5-Branched dibasic acid metabolism ope00670   One carbon pool by folate ope00680   Methane metabolism ope00710   Carbon fixation by Calvin cycle ope00720   Other carbon fixation pathways ope00730   Thiamine metabolism ope00740   Riboflavin metabolism ope00750   Vitamin B6 metabolism ope00760   Nicotinate and nicotinamide metabolism ope00770   Pantothenate and CoA biosynthesis ope00780   Biotin metabolism ope00785   Lipoic acid metabolism ope00790   Folate biosynthesis ope00860   Porphyrin metabolism ope00900   Terpenoid backbone biosynthesis ope00907   Pinene, camphor and geraniol degradation ope00910   Nitrogen metabolism ope00920   Sulfur metabolism ope00930   Caprolactam degradation ope00999   Biosynthesis of various plant secondary metabolites ope01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system