PATHWAY: otk01100 Help Entry otk01100                    Pathway                                 Name Metabolic pathways - Ottowia oryzae Class BRITE hierarchy Pathway map otk01100   Metabolic pathways Module otk_M00002   Glycolysis, core module involving three-carbon compounds [PATH:otk01100] otk_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:otk01100] otk_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:otk01100] otk_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:otk01100] otk_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:otk01100] otk_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:otk01100] otk_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:otk01100] otk_M00012   Glyoxylate cycle [PATH:otk01100] otk_M00015   Proline biosynthesis, glutamate => proline [PATH:otk01100] otk_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:otk01100] otk_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:otk01100] otk_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:otk01100] otk_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:otk01100] otk_M00021   Cysteine biosynthesis, serine => cysteine [PATH:otk01100] otk_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:otk01100] otk_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:otk01100] otk_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:otk01100] otk_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:otk01100] otk_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:otk01100] otk_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:otk01100] otk_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:otk01100] otk_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:otk01100] otk_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:otk01100] otk_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:otk01100] otk_M00063   CMP-KDO biosynthesis [PATH:otk01100] otk_M00082   Fatty acid biosynthesis, initiation [PATH:otk01100] otk_M00083   Fatty acid biosynthesis, elongation [PATH:otk01100] otk_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:otk01100] otk_M00087   beta-Oxidation [PATH:otk01100] otk_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:otk01100] otk_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:otk01100] otk_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:otk01100] otk_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:otk01100] otk_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:otk01100] otk_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:otk01100] otk_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:otk01100] otk_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:otk01100] otk_M00149   Succinate dehydrogenase, prokaryotes [PATH:otk01100] otk_M00151   Cytochrome bc1 complex respiratory unit [PATH:otk01100] otk_M00155   Cytochrome c oxidase, prokaryotes [PATH:otk01100] otk_M00156   Cytochrome c oxidase, cbb3-type [PATH:otk01100] otk_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:otk01100] otk_M00168   CAM (Crassulacean acid metabolism), dark [PATH:otk01100] otk_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:otk01100] otk_M00417   Cytochrome o ubiquinol oxidase [PATH:otk01100] otk_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:otk01100] otk_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:otk01100] otk_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:otk01100] otk_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:otk01100] otk_M00621   Glycine cleavage system [PATH:otk01100] otk_M00623   Phthalate degradation, phthalate => protocatechuate [PATH:otk01100] otk_M00793   dTDP-L-rhamnose biosynthesis [PATH:otk01100] otk_M00844   Arginine biosynthesis, ornithine => arginine [PATH:otk01100] otk_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:otk01100] otk_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:otk01100] otk_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:otk01100] otk_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:otk01100] otk_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:otk01100] otk_M00970   Proline degradation, proline => glutamate [PATH:otk01100] Organism Ottowia oryzae [GN:otk] Related pathway otk00010   Glycolysis / Gluconeogenesis otk00020   Citrate cycle (TCA cycle) otk00030   Pentose phosphate pathway otk00040   Pentose and glucuronate interconversions otk00051   Fructose and mannose metabolism otk00052   Galactose metabolism otk00053   Ascorbate and aldarate metabolism otk00061   Fatty acid biosynthesis otk00071   Fatty acid degradation otk00130   Ubiquinone and other terpenoid-quinone biosynthesis otk00190   Oxidative phosphorylation otk00220   Arginine biosynthesis otk00230   Purine metabolism otk00240   Pyrimidine metabolism otk00250   Alanine, aspartate and glutamate metabolism otk00260   Glycine, serine and threonine metabolism otk00261   Monobactam biosynthesis otk00270   Cysteine and methionine metabolism otk00280   Valine, leucine and isoleucine degradation otk00290   Valine, leucine and isoleucine biosynthesis otk00300   Lysine biosynthesis otk00310   Lysine degradation otk00330   Arginine and proline metabolism otk00332   Carbapenem biosynthesis otk00340   Histidine metabolism otk00350   Tyrosine metabolism otk00360   Phenylalanine metabolism otk00361   Chlorocyclohexane and chlorobenzene degradation otk00362   Benzoate degradation otk00364   Fluorobenzoate degradation otk00380   Tryptophan metabolism otk00400   Phenylalanine, tyrosine and tryptophan biosynthesis otk00401   Novobiocin biosynthesis otk00410   beta-Alanine metabolism otk00450   Selenocompound metabolism otk00460   Cyanoamino acid metabolism otk00470   D-Amino acid metabolism otk00480   Glutathione metabolism otk00500   Starch and sucrose metabolism otk00520   Amino sugar and nucleotide sugar metabolism otk00521   Streptomycin biosynthesis otk00523   Polyketide sugar unit biosynthesis otk00525   Acarbose and validamycin biosynthesis otk00540   Lipopolysaccharide biosynthesis otk00541   O-Antigen nucleotide sugar biosynthesis otk00543   Exopolysaccharide biosynthesis otk00550   Peptidoglycan biosynthesis otk00552   Teichoic acid biosynthesis otk00561   Glycerolipid metabolism otk00562   Inositol phosphate metabolism otk00564   Glycerophospholipid metabolism otk00565   Ether lipid metabolism otk00592   alpha-Linolenic acid metabolism otk00620   Pyruvate metabolism otk00623   Toluene degradation otk00624   Polycyclic aromatic hydrocarbon degradation otk00625   Chloroalkane and chloroalkene degradation otk00626   Naphthalene degradation otk00627   Aminobenzoate degradation otk00630   Glyoxylate and dicarboxylate metabolism otk00633   Nitrotoluene degradation otk00640   Propanoate metabolism otk00643   Styrene degradation otk00650   Butanoate metabolism otk00660   C5-Branched dibasic acid metabolism otk00670   One carbon pool by folate otk00680   Methane metabolism otk00730   Thiamine metabolism otk00740   Riboflavin metabolism otk00750   Vitamin B6 metabolism otk00760   Nicotinate and nicotinamide metabolism otk00770   Pantothenate and CoA biosynthesis otk00780   Biotin metabolism otk00785   Lipoic acid metabolism otk00790   Folate biosynthesis otk00860   Porphyrin metabolism otk00900   Terpenoid backbone biosynthesis otk00906   Carotenoid biosynthesis otk00907   Pinene, camphor and geraniol degradation otk00910   Nitrogen metabolism otk00920   Sulfur metabolism otk00930   Caprolactam degradation otk00999   Biosynthesis of various plant secondary metabolites otk01040   Biosynthesis of unsaturated fatty acids otk01053   Biosynthesis of siderophore group nonribosomal peptides otk01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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