KEGG   PATHWAY: pakh01100
Entry
pakh01100                   Pathway                                
Name
Metabolic pathways - Photorhabdus akhurstii
Class
Pathway map
pakh01100  Metabolic pathways
pakh01100

Module
pakh_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pakh01100]
pakh_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pakh01100]
pakh_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pakh01100]
pakh_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pakh01100]
pakh_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pakh01100]
pakh_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pakh01100]
pakh_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pakh01100]
pakh_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pakh01100]
pakh_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pakh01100]
pakh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pakh01100]
pakh_M00012  Glyoxylate cycle [PATH:pakh01100]
pakh_M00015  Proline biosynthesis, glutamate => proline [PATH:pakh01100]
pakh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pakh01100]
pakh_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pakh01100]
pakh_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pakh01100]
pakh_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pakh01100]
pakh_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pakh01100]
pakh_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pakh01100]
pakh_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pakh01100]
pakh_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pakh01100]
pakh_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pakh01100]
pakh_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pakh01100]
pakh_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pakh01100]
pakh_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pakh01100]
pakh_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pakh01100]
pakh_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pakh01100]
pakh_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pakh01100]
pakh_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pakh01100]
pakh_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pakh01100]
pakh_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pakh01100]
pakh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pakh01100]
pakh_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pakh01100]
pakh_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pakh01100]
pakh_M00063  CMP-KDO biosynthesis [PATH:pakh01100]
pakh_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pakh01100]
pakh_M00082  Fatty acid biosynthesis, initiation [PATH:pakh01100]
pakh_M00083  Fatty acid biosynthesis, elongation [PATH:pakh01100]
pakh_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pakh01100]
pakh_M00087  beta-Oxidation [PATH:pakh01100]
pakh_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pakh01100]
pakh_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pakh01100]
pakh_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pakh01100]
pakh_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pakh01100]
pakh_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pakh01100]
pakh_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pakh01100]
pakh_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pakh01100]
pakh_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pakh01100]
pakh_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pakh01100]
pakh_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pakh01100]
pakh_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pakh01100]
pakh_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pakh01100]
pakh_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pakh01100]
pakh_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pakh01100]
pakh_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pakh01100]
pakh_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pakh01100]
pakh_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pakh01100]
pakh_M00149  Succinate dehydrogenase, prokaryotes [PATH:pakh01100]
pakh_M00150  Fumarate reductase, prokaryotes [PATH:pakh01100]
pakh_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pakh01100]
pakh_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pakh01100]
pakh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pakh01100]
pakh_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pakh01100]
pakh_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pakh01100]
pakh_M00417  Cytochrome o ubiquinol oxidase [PATH:pakh01100]
pakh_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pakh01100]
pakh_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pakh01100]
pakh_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pakh01100]
pakh_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pakh01100]
pakh_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pakh01100]
pakh_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pakh01100]
pakh_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pakh01100]
pakh_M00621  Glycine cleavage system [PATH:pakh01100]
pakh_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pakh01100]
pakh_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pakh01100]
pakh_M00793  dTDP-L-rhamnose biosynthesis [PATH:pakh01100]
pakh_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pakh01100]
pakh_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:pakh01100]
pakh_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pakh01100]
pakh_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pakh01100]
pakh_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pakh01100]
pakh_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pakh01100]
pakh_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pakh01100]
pakh_M00970  Proline degradation, proline => glutamate [PATH:pakh01100]
Organism
Photorhabdus akhurstii [GN:pakh]
Related
pathway
pakh00010  Glycolysis / Gluconeogenesis
pakh00020  Citrate cycle (TCA cycle)
pakh00030  Pentose phosphate pathway
pakh00040  Pentose and glucuronate interconversions
pakh00051  Fructose and mannose metabolism
pakh00052  Galactose metabolism
pakh00053  Ascorbate and aldarate metabolism
pakh00061  Fatty acid biosynthesis
pakh00071  Fatty acid degradation
pakh00130  Ubiquinone and other terpenoid-quinone biosynthesis
pakh00190  Oxidative phosphorylation
pakh00220  Arginine biosynthesis
pakh00230  Purine metabolism
pakh00240  Pyrimidine metabolism
pakh00250  Alanine, aspartate and glutamate metabolism
pakh00260  Glycine, serine and threonine metabolism
pakh00261  Monobactam biosynthesis
pakh00270  Cysteine and methionine metabolism
pakh00280  Valine, leucine and isoleucine degradation
pakh00290  Valine, leucine and isoleucine biosynthesis
pakh00300  Lysine biosynthesis
pakh00310  Lysine degradation
pakh00330  Arginine and proline metabolism
pakh00332  Carbapenem biosynthesis
pakh00340  Histidine metabolism
pakh00350  Tyrosine metabolism
pakh00360  Phenylalanine metabolism
pakh00361  Chlorocyclohexane and chlorobenzene degradation
pakh00362  Benzoate degradation
pakh00380  Tryptophan metabolism
pakh00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pakh00401  Novobiocin biosynthesis
pakh00410  beta-Alanine metabolism
pakh00430  Taurine and hypotaurine metabolism
pakh00450  Selenocompound metabolism
pakh00460  Cyanoamino acid metabolism
pakh00470  D-Amino acid metabolism
pakh00480  Glutathione metabolism
pakh00500  Starch and sucrose metabolism
pakh00511  Other glycan degradation
pakh00520  Amino sugar and nucleotide sugar metabolism
pakh00521  Streptomycin biosynthesis
pakh00523  Polyketide sugar unit biosynthesis
pakh00525  Acarbose and validamycin biosynthesis
pakh00540  Lipopolysaccharide biosynthesis
pakh00541  O-Antigen nucleotide sugar biosynthesis
pakh00542  O-Antigen repeat unit biosynthesis
pakh00543  Exopolysaccharide biosynthesis
pakh00550  Peptidoglycan biosynthesis
pakh00552  Teichoic acid biosynthesis
pakh00561  Glycerolipid metabolism
pakh00562  Inositol phosphate metabolism
pakh00564  Glycerophospholipid metabolism
pakh00592  alpha-Linolenic acid metabolism
pakh00600  Sphingolipid metabolism
pakh00620  Pyruvate metabolism
pakh00621  Dioxin degradation
pakh00622  Xylene degradation
pakh00625  Chloroalkane and chloroalkene degradation
pakh00626  Naphthalene degradation
pakh00627  Aminobenzoate degradation
pakh00630  Glyoxylate and dicarboxylate metabolism
pakh00633  Nitrotoluene degradation
pakh00640  Propanoate metabolism
pakh00643  Styrene degradation
pakh00650  Butanoate metabolism
pakh00660  C5-Branched dibasic acid metabolism
pakh00670  One carbon pool by folate
pakh00680  Methane metabolism
pakh00710  Carbon fixation by Calvin cycle
pakh00720  Other carbon fixation pathways
pakh00730  Thiamine metabolism
pakh00740  Riboflavin metabolism
pakh00750  Vitamin B6 metabolism
pakh00760  Nicotinate and nicotinamide metabolism
pakh00770  Pantothenate and CoA biosynthesis
pakh00780  Biotin metabolism
pakh00785  Lipoic acid metabolism
pakh00790  Folate biosynthesis
pakh00860  Porphyrin metabolism
pakh00900  Terpenoid backbone biosynthesis
pakh00906  Carotenoid biosynthesis
pakh00907  Pinene, camphor and geraniol degradation
pakh00910  Nitrogen metabolism
pakh00920  Sulfur metabolism
pakh00930  Caprolactam degradation
pakh00997  Biosynthesis of various other secondary metabolites
pakh00999  Biosynthesis of various plant secondary metabolites
pakh01040  Biosynthesis of unsaturated fatty acids
pakh01053  Biosynthesis of siderophore group nonribosomal peptides
pakh01056  Biosynthesis of type II polyketide backbone
KO pathway
ko01100   
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