KEGG   PATHWAY: pata01100
Entry
pata01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas atacamensis
Class
Pathway map
pata01100  Metabolic pathways
pata01100

Module
pata_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pata01100]
pata_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pata01100]
pata_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pata01100]
pata_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pata01100]
pata_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pata01100]
pata_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pata01100]
pata_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pata01100]
pata_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pata01100]
pata_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pata01100]
pata_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pata01100]
pata_M00015  Proline biosynthesis, glutamate => proline [PATH:pata01100]
pata_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pata01100]
pata_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pata01100]
pata_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pata01100]
pata_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pata01100]
pata_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pata01100]
pata_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pata01100]
pata_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pata01100]
pata_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pata01100]
pata_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pata01100]
pata_M00034  Methionine salvage pathway [PATH:pata01100]
pata_M00035  Methionine degradation [PATH:pata01100]
pata_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pata01100]
pata_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pata01100]
pata_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pata01100]
pata_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pata01100]
pata_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pata01100]
pata_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pata01100]
pata_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pata01100]
pata_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pata01100]
pata_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pata01100]
pata_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pata01100]
pata_M00063  CMP-KDO biosynthesis [PATH:pata01100]
pata_M00082  Fatty acid biosynthesis, initiation [PATH:pata01100]
pata_M00083  Fatty acid biosynthesis, elongation [PATH:pata01100]
pata_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pata01100]
pata_M00087  beta-Oxidation [PATH:pata01100]
pata_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pata01100]
pata_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pata01100]
pata_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pata01100]
pata_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pata01100]
pata_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pata01100]
pata_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pata01100]
pata_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pata01100]
pata_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pata01100]
pata_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pata01100]
pata_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pata01100]
pata_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pata01100]
pata_M00149  Succinate dehydrogenase, prokaryotes [PATH:pata01100]
pata_M00151  Cytochrome bc1 complex respiratory unit [PATH:pata01100]
pata_M00155  Cytochrome c oxidase, prokaryotes [PATH:pata01100]
pata_M00156  Cytochrome c oxidase, cbb3-type [PATH:pata01100]
pata_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pata01100]
pata_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pata01100]
pata_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pata01100]
pata_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pata01100]
pata_M00417  Cytochrome o ubiquinol oxidase [PATH:pata01100]
pata_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pata01100]
pata_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pata01100]
pata_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pata01100]
pata_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pata01100]
pata_M00555  Betaine biosynthesis, choline => betaine [PATH:pata01100]
pata_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pata01100]
pata_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pata01100]
pata_M00621  Glycine cleavage system [PATH:pata01100]
pata_M00793  dTDP-L-rhamnose biosynthesis [PATH:pata01100]
pata_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pata01100]
pata_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pata01100]
pata_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pata01100]
pata_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pata01100]
pata_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pata01100]
pata_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pata01100]
pata_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pata01100]
pata_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pata01100]
pata_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pata01100]
pata_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pata01100]
pata_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pata01100]
pata_M00970  Proline degradation, proline => glutamate [PATH:pata01100]
pata_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pata01100]
Organism
Pseudomonas atacamensis [GN:pata]
Related
pathway
pata00010  Glycolysis / Gluconeogenesis
pata00020  Citrate cycle (TCA cycle)
pata00030  Pentose phosphate pathway
pata00040  Pentose and glucuronate interconversions
pata00051  Fructose and mannose metabolism
pata00052  Galactose metabolism
pata00053  Ascorbate and aldarate metabolism
pata00061  Fatty acid biosynthesis
pata00071  Fatty acid degradation
pata00074  Mycolic acid biosynthesis
pata00130  Ubiquinone and other terpenoid-quinone biosynthesis
pata00190  Oxidative phosphorylation
pata00220  Arginine biosynthesis
pata00230  Purine metabolism
pata00240  Pyrimidine metabolism
pata00250  Alanine, aspartate and glutamate metabolism
pata00260  Glycine, serine and threonine metabolism
pata00261  Monobactam biosynthesis
pata00270  Cysteine and methionine metabolism
pata00280  Valine, leucine and isoleucine degradation
pata00290  Valine, leucine and isoleucine biosynthesis
pata00300  Lysine biosynthesis
pata00310  Lysine degradation
pata00330  Arginine and proline metabolism
pata00332  Carbapenem biosynthesis
pata00340  Histidine metabolism
pata00350  Tyrosine metabolism
pata00360  Phenylalanine metabolism
pata00362  Benzoate degradation
pata00380  Tryptophan metabolism
pata00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pata00401  Novobiocin biosynthesis
pata00410  beta-Alanine metabolism
pata00430  Taurine and hypotaurine metabolism
pata00440  Phosphonate and phosphinate metabolism
pata00450  Selenocompound metabolism
pata00460  Cyanoamino acid metabolism
pata00470  D-Amino acid metabolism
pata00480  Glutathione metabolism
pata00500  Starch and sucrose metabolism
pata00520  Amino sugar and nucleotide sugar metabolism
pata00521  Streptomycin biosynthesis
pata00523  Polyketide sugar unit biosynthesis
pata00525  Acarbose and validamycin biosynthesis
pata00540  Lipopolysaccharide biosynthesis
pata00541  O-Antigen nucleotide sugar biosynthesis
pata00543  Exopolysaccharide biosynthesis
pata00550  Peptidoglycan biosynthesis
pata00552  Teichoic acid biosynthesis
pata00561  Glycerolipid metabolism
pata00562  Inositol phosphate metabolism
pata00564  Glycerophospholipid metabolism
pata00592  alpha-Linolenic acid metabolism
pata00620  Pyruvate metabolism
pata00625  Chloroalkane and chloroalkene degradation
pata00626  Naphthalene degradation
pata00627  Aminobenzoate degradation
pata00630  Glyoxylate and dicarboxylate metabolism
pata00633  Nitrotoluene degradation
pata00640  Propanoate metabolism
pata00643  Styrene degradation
pata00650  Butanoate metabolism
pata00660  C5-Branched dibasic acid metabolism
pata00670  One carbon pool by folate
pata00680  Methane metabolism
pata00710  Carbon fixation by Calvin cycle
pata00720  Other carbon fixation pathways
pata00730  Thiamine metabolism
pata00740  Riboflavin metabolism
pata00750  Vitamin B6 metabolism
pata00760  Nicotinate and nicotinamide metabolism
pata00770  Pantothenate and CoA biosynthesis
pata00780  Biotin metabolism
pata00785  Lipoic acid metabolism
pata00790  Folate biosynthesis
pata00791  Atrazine degradation
pata00860  Porphyrin metabolism
pata00900  Terpenoid backbone biosynthesis
pata00903  Limonene degradation
pata00907  Pinene, camphor and geraniol degradation
pata00910  Nitrogen metabolism
pata00920  Sulfur metabolism
pata00930  Caprolactam degradation
pata00946  Degradation of flavonoids
pata00999  Biosynthesis of various plant secondary metabolites
pata01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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