KEGG   PATHWAY: pba01100
Entry
pba01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas brassicacearum subsp. brassicacearum NFM421
Class
Pathway map
pba01100  Metabolic pathways
pba01100

Module
pba_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pba01100]
pba_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pba01100]
pba_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pba01100]
pba_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pba01100]
pba_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pba01100]
pba_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pba01100]
pba_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pba01100]
pba_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pba01100]
pba_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pba01100]
pba_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pba01100]
pba_M00015  Proline biosynthesis, glutamate => proline [PATH:pba01100]
pba_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pba01100]
pba_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pba01100]
pba_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pba01100]
pba_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pba01100]
pba_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pba01100]
pba_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pba01100]
pba_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pba01100]
pba_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pba01100]
pba_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pba01100]
pba_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pba01100]
pba_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pba01100]
pba_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pba01100]
pba_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pba01100]
pba_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pba01100]
pba_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pba01100]
pba_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pba01100]
pba_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pba01100]
pba_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pba01100]
pba_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pba01100]
pba_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pba01100]
pba_M00063  CMP-KDO biosynthesis [PATH:pba01100]
pba_M00082  Fatty acid biosynthesis, initiation [PATH:pba01100]
pba_M00083  Fatty acid biosynthesis, elongation [PATH:pba01100]
pba_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pba01100]
pba_M00087  beta-Oxidation [PATH:pba01100]
pba_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pba01100]
pba_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pba01100]
pba_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pba01100]
pba_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pba01100]
pba_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pba01100]
pba_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pba01100]
pba_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pba01100]
pba_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pba01100]
pba_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pba01100]
pba_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pba01100]
pba_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pba01100]
pba_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pba01100]
pba_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pba01100]
pba_M00149  Succinate dehydrogenase, prokaryotes [PATH:pba01100]
pba_M00151  Cytochrome bc1 complex respiratory unit [PATH:pba01100]
pba_M00155  Cytochrome c oxidase, prokaryotes [PATH:pba01100]
pba_M00156  Cytochrome c oxidase, cbb3-type [PATH:pba01100]
pba_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pba01100]
pba_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pba01100]
pba_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pba01100]
pba_M00417  Cytochrome o ubiquinol oxidase [PATH:pba01100]
pba_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pba01100]
pba_M00529  Denitrification, nitrate => nitrogen [PATH:pba01100]
pba_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pba01100]
pba_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pba01100]
pba_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pba01100]
pba_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pba01100]
pba_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pba01100]
pba_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pba01100]
pba_M00555  Betaine biosynthesis, choline => betaine [PATH:pba01100]
pba_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pba01100]
pba_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pba01100]
pba_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pba01100]
pba_M00621  Glycine cleavage system [PATH:pba01100]
pba_M00793  dTDP-L-rhamnose biosynthesis [PATH:pba01100]
pba_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pba01100]
pba_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pba01100]
pba_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pba01100]
pba_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pba01100]
pba_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pba01100]
pba_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pba01100]
pba_M00919  Ectoine degradation, ectoine => aspartate [PATH:pba01100]
pba_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pba01100]
pba_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pba01100]
pba_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pba01100]
pba_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pba01100]
pba_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pba01100]
pba_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pba01100]
pba_M00970  Proline degradation, proline => glutamate [PATH:pba01100]
pba_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pba01100]
Organism
Pseudomonas brassicacearum subsp. brassicacearum NFM421 [GN:pba]
Related
pathway
pba00010  Glycolysis / Gluconeogenesis
pba00020  Citrate cycle (TCA cycle)
pba00030  Pentose phosphate pathway
pba00040  Pentose and glucuronate interconversions
pba00051  Fructose and mannose metabolism
pba00052  Galactose metabolism
pba00053  Ascorbate and aldarate metabolism
pba00061  Fatty acid biosynthesis
pba00071  Fatty acid degradation
pba00074  Mycolic acid biosynthesis
pba00130  Ubiquinone and other terpenoid-quinone biosynthesis
pba00190  Oxidative phosphorylation
pba00220  Arginine biosynthesis
pba00230  Purine metabolism
pba00240  Pyrimidine metabolism
pba00250  Alanine, aspartate and glutamate metabolism
pba00260  Glycine, serine and threonine metabolism
pba00261  Monobactam biosynthesis
pba00270  Cysteine and methionine metabolism
pba00280  Valine, leucine and isoleucine degradation
pba00290  Valine, leucine and isoleucine biosynthesis
pba00300  Lysine biosynthesis
pba00310  Lysine degradation
pba00330  Arginine and proline metabolism
pba00332  Carbapenem biosynthesis
pba00340  Histidine metabolism
pba00350  Tyrosine metabolism
pba00360  Phenylalanine metabolism
pba00361  Chlorocyclohexane and chlorobenzene degradation
pba00362  Benzoate degradation
pba00364  Fluorobenzoate degradation
pba00380  Tryptophan metabolism
pba00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pba00401  Novobiocin biosynthesis
pba00410  beta-Alanine metabolism
pba00430  Taurine and hypotaurine metabolism
pba00440  Phosphonate and phosphinate metabolism
pba00450  Selenocompound metabolism
pba00460  Cyanoamino acid metabolism
pba00470  D-Amino acid metabolism
pba00480  Glutathione metabolism
pba00500  Starch and sucrose metabolism
pba00520  Amino sugar and nucleotide sugar metabolism
pba00521  Streptomycin biosynthesis
pba00523  Polyketide sugar unit biosynthesis
pba00525  Acarbose and validamycin biosynthesis
pba00540  Lipopolysaccharide biosynthesis
pba00541  O-Antigen nucleotide sugar biosynthesis
pba00543  Exopolysaccharide biosynthesis
pba00550  Peptidoglycan biosynthesis
pba00552  Teichoic acid biosynthesis
pba00561  Glycerolipid metabolism
pba00562  Inositol phosphate metabolism
pba00564  Glycerophospholipid metabolism
pba00565  Ether lipid metabolism
pba00592  alpha-Linolenic acid metabolism
pba00620  Pyruvate metabolism
pba00621  Dioxin degradation
pba00622  Xylene degradation
pba00623  Toluene degradation
pba00625  Chloroalkane and chloroalkene degradation
pba00626  Naphthalene degradation
pba00627  Aminobenzoate degradation
pba00630  Glyoxylate and dicarboxylate metabolism
pba00633  Nitrotoluene degradation
pba00640  Propanoate metabolism
pba00643  Styrene degradation
pba00650  Butanoate metabolism
pba00660  C5-Branched dibasic acid metabolism
pba00670  One carbon pool by folate
pba00680  Methane metabolism
pba00710  Carbon fixation by Calvin cycle
pba00720  Other carbon fixation pathways
pba00730  Thiamine metabolism
pba00740  Riboflavin metabolism
pba00750  Vitamin B6 metabolism
pba00760  Nicotinate and nicotinamide metabolism
pba00770  Pantothenate and CoA biosynthesis
pba00780  Biotin metabolism
pba00785  Lipoic acid metabolism
pba00790  Folate biosynthesis
pba00791  Atrazine degradation
pba00860  Porphyrin metabolism
pba00900  Terpenoid backbone biosynthesis
pba00907  Pinene, camphor and geraniol degradation
pba00910  Nitrogen metabolism
pba00920  Sulfur metabolism
pba00930  Caprolactam degradation
pba00946  Degradation of flavonoids
pba00984  Steroid degradation
pba00996  Biosynthesis of various alkaloids
pba00999  Biosynthesis of various plant secondary metabolites
pba01040  Biosynthesis of unsaturated fatty acids
pba01053  Biosynthesis of siderophore group nonribosomal peptides
pba01055  Biosynthesis of vancomycin group antibiotics
KO pathway
ko01100   
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