KEGG   PATHWAY: pbb01100
Entry
pbb01100                    Pathway                                
Name
Metabolic pathways - Thiopseudomonas alkaliphila
Class
Pathway map
pbb01100  Metabolic pathways
pbb01100

Module
pbb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pbb01100]
pbb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pbb01100]
pbb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pbb01100]
pbb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pbb01100]
pbb_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pbb01100]
pbb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pbb01100]
pbb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pbb01100]
pbb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pbb01100]
pbb_M00015  Proline biosynthesis, glutamate => proline [PATH:pbb01100]
pbb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pbb01100]
pbb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pbb01100]
pbb_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pbb01100]
pbb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pbb01100]
pbb_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pbb01100]
pbb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pbb01100]
pbb_M00034  Methionine salvage pathway [PATH:pbb01100]
pbb_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pbb01100]
pbb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pbb01100]
pbb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pbb01100]
pbb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pbb01100]
pbb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pbb01100]
pbb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pbb01100]
pbb_M00063  CMP-KDO biosynthesis [PATH:pbb01100]
pbb_M00082  Fatty acid biosynthesis, initiation [PATH:pbb01100]
pbb_M00083  Fatty acid biosynthesis, elongation [PATH:pbb01100]
pbb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pbb01100]
pbb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pbb01100]
pbb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pbb01100]
pbb_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pbb01100]
pbb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pbb01100]
pbb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pbb01100]
pbb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pbb01100]
pbb_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pbb01100]
pbb_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pbb01100]
pbb_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pbb01100]
pbb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pbb01100]
pbb_M00149  Succinate dehydrogenase, prokaryotes [PATH:pbb01100]
pbb_M00151  Cytochrome bc1 complex respiratory unit [PATH:pbb01100]
pbb_M00156  Cytochrome c oxidase, cbb3-type [PATH:pbb01100]
pbb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pbb01100]
pbb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbb01100]
pbb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pbb01100]
pbb_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:pbb01100]
pbb_M00555  Betaine biosynthesis, choline => betaine [PATH:pbb01100]
pbb_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pbb01100]
pbb_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pbb01100]
pbb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pbb01100]
pbb_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pbb01100]
pbb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pbb01100]
pbb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pbb01100]
pbb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pbb01100]
pbb_M00970  Proline degradation, proline => glutamate [PATH:pbb01100]
Organism
Thiopseudomonas alkaliphila [GN:pbb]
Related
pathway
pbb00010  Glycolysis / Gluconeogenesis
pbb00020  Citrate cycle (TCA cycle)
pbb00030  Pentose phosphate pathway
pbb00040  Pentose and glucuronate interconversions
pbb00051  Fructose and mannose metabolism
pbb00052  Galactose metabolism
pbb00053  Ascorbate and aldarate metabolism
pbb00061  Fatty acid biosynthesis
pbb00071  Fatty acid degradation
pbb00130  Ubiquinone and other terpenoid-quinone biosynthesis
pbb00190  Oxidative phosphorylation
pbb00220  Arginine biosynthesis
pbb00230  Purine metabolism
pbb00240  Pyrimidine metabolism
pbb00250  Alanine, aspartate and glutamate metabolism
pbb00260  Glycine, serine and threonine metabolism
pbb00261  Monobactam biosynthesis
pbb00270  Cysteine and methionine metabolism
pbb00280  Valine, leucine and isoleucine degradation
pbb00290  Valine, leucine and isoleucine biosynthesis
pbb00300  Lysine biosynthesis
pbb00310  Lysine degradation
pbb00330  Arginine and proline metabolism
pbb00332  Carbapenem biosynthesis
pbb00340  Histidine metabolism
pbb00350  Tyrosine metabolism
pbb00360  Phenylalanine metabolism
pbb00362  Benzoate degradation
pbb00380  Tryptophan metabolism
pbb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pbb00401  Novobiocin biosynthesis
pbb00410  beta-Alanine metabolism
pbb00430  Taurine and hypotaurine metabolism
pbb00450  Selenocompound metabolism
pbb00460  Cyanoamino acid metabolism
pbb00470  D-Amino acid metabolism
pbb00480  Glutathione metabolism
pbb00500  Starch and sucrose metabolism
pbb00520  Amino sugar and nucleotide sugar metabolism
pbb00521  Streptomycin biosynthesis
pbb00540  Lipopolysaccharide biosynthesis
pbb00541  O-Antigen nucleotide sugar biosynthesis
pbb00550  Peptidoglycan biosynthesis
pbb00552  Teichoic acid biosynthesis
pbb00561  Glycerolipid metabolism
pbb00562  Inositol phosphate metabolism
pbb00564  Glycerophospholipid metabolism
pbb00592  alpha-Linolenic acid metabolism
pbb00620  Pyruvate metabolism
pbb00625  Chloroalkane and chloroalkene degradation
pbb00626  Naphthalene degradation
pbb00630  Glyoxylate and dicarboxylate metabolism
pbb00633  Nitrotoluene degradation
pbb00640  Propanoate metabolism
pbb00650  Butanoate metabolism
pbb00660  C5-Branched dibasic acid metabolism
pbb00670  One carbon pool by folate
pbb00680  Methane metabolism
pbb00710  Carbon fixation by Calvin cycle
pbb00720  Other carbon fixation pathways
pbb00730  Thiamine metabolism
pbb00740  Riboflavin metabolism
pbb00750  Vitamin B6 metabolism
pbb00760  Nicotinate and nicotinamide metabolism
pbb00770  Pantothenate and CoA biosynthesis
pbb00780  Biotin metabolism
pbb00785  Lipoic acid metabolism
pbb00790  Folate biosynthesis
pbb00860  Porphyrin metabolism
pbb00900  Terpenoid backbone biosynthesis
pbb00907  Pinene, camphor and geraniol degradation
pbb00910  Nitrogen metabolism
pbb00920  Sulfur metabolism
pbb00930  Caprolactam degradation
pbb00999  Biosynthesis of various plant secondary metabolites
pbb01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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