PATHWAY: pbh01100 Help Entry pbh01100                    Pathway                                 Name Metabolic pathways - Caldimonas brevitalea Class BRITE hierarchy Pathway map pbh01100   Metabolic pathways Module pbh_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pbh01100] pbh_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pbh01100] pbh_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pbh01100] pbh_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pbh01100] pbh_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pbh01100] pbh_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pbh01100] pbh_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pbh01100] pbh_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pbh01100] pbh_M00012   Glyoxylate cycle [PATH:pbh01100] pbh_M00015   Proline biosynthesis, glutamate => proline [PATH:pbh01100] pbh_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pbh01100] pbh_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pbh01100] pbh_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pbh01100] pbh_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pbh01100] pbh_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pbh01100] pbh_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pbh01100] pbh_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pbh01100] pbh_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pbh01100] pbh_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pbh01100] pbh_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pbh01100] pbh_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:pbh01100] pbh_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pbh01100] pbh_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pbh01100] pbh_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pbh01100] pbh_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pbh01100] pbh_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pbh01100] pbh_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pbh01100] pbh_M00063   CMP-KDO biosynthesis [PATH:pbh01100] pbh_M00082   Fatty acid biosynthesis, initiation [PATH:pbh01100] pbh_M00083   Fatty acid biosynthesis, elongation [PATH:pbh01100] pbh_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pbh01100] pbh_M00087   beta-Oxidation [PATH:pbh01100] pbh_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pbh01100] pbh_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pbh01100] pbh_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pbh01100] pbh_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pbh01100] pbh_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pbh01100] pbh_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pbh01100] pbh_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pbh01100] pbh_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pbh01100] pbh_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pbh01100] pbh_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pbh01100] pbh_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pbh01100] pbh_M00149   Succinate dehydrogenase, prokaryotes [PATH:pbh01100] pbh_M00151   Cytochrome bc1 complex respiratory unit [PATH:pbh01100] pbh_M00155   Cytochrome c oxidase, prokaryotes [PATH:pbh01100] pbh_M00156   Cytochrome c oxidase, cbb3-type [PATH:pbh01100] pbh_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pbh01100] pbh_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pbh01100] pbh_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbh01100] pbh_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pbh01100] pbh_M00417   Cytochrome o ubiquinol oxidase [PATH:pbh01100] pbh_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pbh01100] pbh_M00529   Denitrification, nitrate => nitrogen [PATH:pbh01100] pbh_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pbh01100] pbh_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pbh01100] pbh_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pbh01100] pbh_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pbh01100] pbh_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pbh01100] pbh_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:pbh01100] pbh_M00621   Glycine cleavage system [PATH:pbh01100] pbh_M00793   dTDP-L-rhamnose biosynthesis [PATH:pbh01100] pbh_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pbh01100] pbh_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pbh01100] pbh_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pbh01100] pbh_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pbh01100] pbh_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pbh01100] pbh_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pbh01100] pbh_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pbh01100] pbh_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pbh01100] pbh_M00970   Proline degradation, proline => glutamate [PATH:pbh01100] Organism Caldimonas brevitalea [GN:pbh] Related pathway pbh00010   Glycolysis / Gluconeogenesis pbh00020   Citrate cycle (TCA cycle) pbh00030   Pentose phosphate pathway pbh00040   Pentose and glucuronate interconversions pbh00051   Fructose and mannose metabolism pbh00052   Galactose metabolism pbh00053   Ascorbate and aldarate metabolism pbh00061   Fatty acid biosynthesis pbh00071   Fatty acid degradation pbh00130   Ubiquinone and other terpenoid-quinone biosynthesis pbh00190   Oxidative phosphorylation pbh00220   Arginine biosynthesis pbh00230   Purine metabolism pbh00240   Pyrimidine metabolism pbh00250   Alanine, aspartate and glutamate metabolism pbh00260   Glycine, serine and threonine metabolism pbh00261   Monobactam biosynthesis pbh00270   Cysteine and methionine metabolism pbh00280   Valine, leucine and isoleucine degradation pbh00290   Valine, leucine and isoleucine biosynthesis pbh00300   Lysine biosynthesis pbh00310   Lysine degradation pbh00311   Penicillin and cephalosporin biosynthesis pbh00330   Arginine and proline metabolism pbh00332   Carbapenem biosynthesis pbh00340   Histidine metabolism pbh00350   Tyrosine metabolism pbh00360   Phenylalanine metabolism pbh00361   Chlorocyclohexane and chlorobenzene degradation pbh00362   Benzoate degradation pbh00364   Fluorobenzoate degradation pbh00380   Tryptophan metabolism pbh00400   Phenylalanine, tyrosine and tryptophan biosynthesis pbh00401   Novobiocin biosynthesis pbh00410   beta-Alanine metabolism pbh00430   Taurine and hypotaurine metabolism pbh00440   Phosphonate and phosphinate metabolism pbh00450   Selenocompound metabolism pbh00460   Cyanoamino acid metabolism pbh00470   D-Amino acid metabolism pbh00480   Glutathione metabolism pbh00500   Starch and sucrose metabolism pbh00520   Amino sugar and nucleotide sugar metabolism pbh00521   Streptomycin biosynthesis pbh00523   Polyketide sugar unit biosynthesis pbh00525   Acarbose and validamycin biosynthesis pbh00540   Lipopolysaccharide biosynthesis pbh00541   O-Antigen nucleotide sugar biosynthesis pbh00543   Exopolysaccharide biosynthesis pbh00550   Peptidoglycan biosynthesis pbh00552   Teichoic acid biosynthesis pbh00561   Glycerolipid metabolism pbh00562   Inositol phosphate metabolism pbh00564   Glycerophospholipid metabolism pbh00565   Ether lipid metabolism pbh00592   alpha-Linolenic acid metabolism pbh00620   Pyruvate metabolism pbh00621   Dioxin degradation pbh00622   Xylene degradation pbh00623   Toluene degradation pbh00625   Chloroalkane and chloroalkene degradation pbh00626   Naphthalene degradation pbh00627   Aminobenzoate degradation pbh00630   Glyoxylate and dicarboxylate metabolism pbh00633   Nitrotoluene degradation pbh00640   Propanoate metabolism pbh00643   Styrene degradation pbh00650   Butanoate metabolism pbh00660   C5-Branched dibasic acid metabolism pbh00670   One carbon pool by folate pbh00680   Methane metabolism pbh00710   Carbon fixation by Calvin cycle pbh00720   Other carbon fixation pathways pbh00730   Thiamine metabolism pbh00740   Riboflavin metabolism pbh00750   Vitamin B6 metabolism pbh00760   Nicotinate and nicotinamide metabolism pbh00770   Pantothenate and CoA biosynthesis pbh00780   Biotin metabolism pbh00785   Lipoic acid metabolism pbh00790   Folate biosynthesis pbh00791   Atrazine degradation pbh00860   Porphyrin metabolism pbh00900   Terpenoid backbone biosynthesis pbh00906   Carotenoid biosynthesis pbh00907   Pinene, camphor and geraniol degradation pbh00910   Nitrogen metabolism pbh00920   Sulfur metabolism pbh00930   Caprolactam degradation pbh00946   Degradation of flavonoids pbh00999   Biosynthesis of various plant secondary metabolites pbh01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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