KEGG   PATHWAY: pbry01100
Entry
pbry01100                   Pathway                                
Name
Metabolic pathways - Paraburkholderia bryophila
Class
Pathway map
pbry01100  Metabolic pathways
pbry01100

Module
pbry_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pbry01100]
pbry_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pbry01100]
pbry_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pbry01100]
pbry_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pbry01100]
pbry_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pbry01100]
pbry_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pbry01100]
pbry_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pbry01100]
pbry_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pbry01100]
pbry_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pbry01100]
pbry_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pbry01100]
pbry_M00012  Glyoxylate cycle [PATH:pbry01100]
pbry_M00015  Proline biosynthesis, glutamate => proline [PATH:pbry01100]
pbry_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pbry01100]
pbry_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pbry01100]
pbry_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pbry01100]
pbry_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pbry01100]
pbry_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pbry01100]
pbry_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pbry01100]
pbry_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pbry01100]
pbry_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pbry01100]
pbry_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pbry01100]
pbry_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pbry01100]
pbry_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pbry01100]
pbry_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pbry01100]
pbry_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pbry01100]
pbry_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pbry01100]
pbry_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pbry01100]
pbry_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pbry01100]
pbry_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pbry01100]
pbry_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pbry01100]
pbry_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pbry01100]
pbry_M00063  CMP-KDO biosynthesis [PATH:pbry01100]
pbry_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pbry01100]
pbry_M00082  Fatty acid biosynthesis, initiation [PATH:pbry01100]
pbry_M00083  Fatty acid biosynthesis, elongation [PATH:pbry01100]
pbry_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pbry01100]
pbry_M00087  beta-Oxidation [PATH:pbry01100]
pbry_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pbry01100]
pbry_M00098  Acylglycerol degradation [PATH:pbry01100]
pbry_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pbry01100]
pbry_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pbry01100]
pbry_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pbry01100]
pbry_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pbry01100]
pbry_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pbry01100]
pbry_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pbry01100]
pbry_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pbry01100]
pbry_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pbry01100]
pbry_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pbry01100]
pbry_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pbry01100]
pbry_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:pbry01100]
pbry_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pbry01100]
pbry_M00149  Succinate dehydrogenase, prokaryotes [PATH:pbry01100]
pbry_M00151  Cytochrome bc1 complex respiratory unit [PATH:pbry01100]
pbry_M00155  Cytochrome c oxidase, prokaryotes [PATH:pbry01100]
pbry_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pbry01100]
pbry_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pbry01100]
pbry_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pbry01100]
pbry_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbry01100]
pbry_M00417  Cytochrome o ubiquinol oxidase [PATH:pbry01100]
pbry_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pbry01100]
pbry_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pbry01100]
pbry_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pbry01100]
pbry_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pbry01100]
pbry_M00555  Betaine biosynthesis, choline => betaine [PATH:pbry01100]
pbry_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pbry01100]
pbry_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pbry01100]
pbry_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pbry01100]
pbry_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pbry01100]
pbry_M00621  Glycine cleavage system [PATH:pbry01100]
pbry_M00793  dTDP-L-rhamnose biosynthesis [PATH:pbry01100]
pbry_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pbry01100]
pbry_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pbry01100]
pbry_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pbry01100]
pbry_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pbry01100]
pbry_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pbry01100]
pbry_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pbry01100]
pbry_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pbry01100]
pbry_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pbry01100]
pbry_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pbry01100]
pbry_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pbry01100]
pbry_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pbry01100]
pbry_M00970  Proline degradation, proline => glutamate [PATH:pbry01100]
pbry_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pbry01100]
Organism
Paraburkholderia bryophila [GN:pbry]
Related
pathway
pbry00010  Glycolysis / Gluconeogenesis
pbry00020  Citrate cycle (TCA cycle)
pbry00030  Pentose phosphate pathway
pbry00040  Pentose and glucuronate interconversions
pbry00051  Fructose and mannose metabolism
pbry00052  Galactose metabolism
pbry00053  Ascorbate and aldarate metabolism
pbry00061  Fatty acid biosynthesis
pbry00071  Fatty acid degradation
pbry00100  Steroid biosynthesis
pbry00130  Ubiquinone and other terpenoid-quinone biosynthesis
pbry00190  Oxidative phosphorylation
pbry00220  Arginine biosynthesis
pbry00230  Purine metabolism
pbry00240  Pyrimidine metabolism
pbry00250  Alanine, aspartate and glutamate metabolism
pbry00260  Glycine, serine and threonine metabolism
pbry00261  Monobactam biosynthesis
pbry00270  Cysteine and methionine metabolism
pbry00280  Valine, leucine and isoleucine degradation
pbry00290  Valine, leucine and isoleucine biosynthesis
pbry00300  Lysine biosynthesis
pbry00310  Lysine degradation
pbry00330  Arginine and proline metabolism
pbry00332  Carbapenem biosynthesis
pbry00340  Histidine metabolism
pbry00350  Tyrosine metabolism
pbry00360  Phenylalanine metabolism
pbry00361  Chlorocyclohexane and chlorobenzene degradation
pbry00362  Benzoate degradation
pbry00364  Fluorobenzoate degradation
pbry00380  Tryptophan metabolism
pbry00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pbry00401  Novobiocin biosynthesis
pbry00405  Phenazine biosynthesis
pbry00410  beta-Alanine metabolism
pbry00430  Taurine and hypotaurine metabolism
pbry00440  Phosphonate and phosphinate metabolism
pbry00450  Selenocompound metabolism
pbry00460  Cyanoamino acid metabolism
pbry00470  D-Amino acid metabolism
pbry00480  Glutathione metabolism
pbry00500  Starch and sucrose metabolism
pbry00520  Amino sugar and nucleotide sugar metabolism
pbry00521  Streptomycin biosynthesis
pbry00523  Polyketide sugar unit biosynthesis
pbry00525  Acarbose and validamycin biosynthesis
pbry00540  Lipopolysaccharide biosynthesis
pbry00541  O-Antigen nucleotide sugar biosynthesis
pbry00543  Exopolysaccharide biosynthesis
pbry00550  Peptidoglycan biosynthesis
pbry00552  Teichoic acid biosynthesis
pbry00561  Glycerolipid metabolism
pbry00562  Inositol phosphate metabolism
pbry00564  Glycerophospholipid metabolism
pbry00592  alpha-Linolenic acid metabolism
pbry00620  Pyruvate metabolism
pbry00621  Dioxin degradation
pbry00622  Xylene degradation
pbry00623  Toluene degradation
pbry00625  Chloroalkane and chloroalkene degradation
pbry00626  Naphthalene degradation
pbry00627  Aminobenzoate degradation
pbry00630  Glyoxylate and dicarboxylate metabolism
pbry00633  Nitrotoluene degradation
pbry00640  Propanoate metabolism
pbry00643  Styrene degradation
pbry00650  Butanoate metabolism
pbry00660  C5-Branched dibasic acid metabolism
pbry00670  One carbon pool by folate
pbry00680  Methane metabolism
pbry00710  Carbon fixation in photosynthetic organisms
pbry00730  Thiamine metabolism
pbry00740  Riboflavin metabolism
pbry00750  Vitamin B6 metabolism
pbry00760  Nicotinate and nicotinamide metabolism
pbry00770  Pantothenate and CoA biosynthesis
pbry00780  Biotin metabolism
pbry00785  Lipoic acid metabolism
pbry00790  Folate biosynthesis
pbry00791  Atrazine degradation
pbry00860  Porphyrin metabolism
pbry00900  Terpenoid backbone biosynthesis
pbry00903  Limonene degradation
pbry00906  Carotenoid biosynthesis
pbry00907  Pinene, camphor and geraniol degradation
pbry00909  Sesquiterpenoid and triterpenoid biosynthesis
pbry00910  Nitrogen metabolism
pbry00920  Sulfur metabolism
pbry00930  Caprolactam degradation
pbry00946  Degradation of flavonoids
pbry00984  Steroid degradation
pbry00996  Biosynthesis of various alkaloids
pbry00997  Biosynthesis of various other secondary metabolites
pbry00998  Biosynthesis of various antibiotics
pbry00999  Biosynthesis of various plant secondary metabolites
pbry01040  Biosynthesis of unsaturated fatty acids
pbry01057  Biosynthesis of type II polyketide products
KO pathway
ko01100   
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