KEGG   PATHWAY: pcaf00364
Entry
pcaf00364                   Pathway                                
Name
Fluorobenzoate degradation - Paraburkholderia caffeinilytica
Class
Metabolism; Xenobiotics biodegradation and metabolism
Pathway map
pcaf00364  Fluorobenzoate degradation
pcaf00364

Other DBs
UMBBD: 3fb 4fb box dcb
Organism
Paraburkholderia caffeinilytica [GN:pcaf]
Gene
DSC91_002406  benzoate 1,2-dioxygenase subunit alpha [KO:K05549] [EC:1.14.12.10 1.14.12.-]
DSC91_002405  benzoate 1,2-dioxygenase small subunit [KO:K05550] [EC:1.14.12.10 1.14.12.-]
DSC91_002404  NADH oxidase [KO:K05784] [EC:1.18.1.-]
DSC91_002403  1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase [KO:K05783] [EC:1.3.1.25 1.3.1.-]
DSC91_002408  catechol 1,2-dioxygenase [KO:K03381] [EC:1.13.11.1]
DSC91_003387  catechol 1,2-dioxygenase [KO:K03381] [EC:1.13.11.1]
DSC91_002401  carboxymethylenebutenolidase [KO:K01061] [EC:3.1.1.45]
DSC91_002816  carboxymethylenebutenolidase [KO:K01061] [EC:3.1.1.45]
DSC91_005550  carboxymethylenebutenolidase [KO:K01061] [EC:3.1.1.45]
DSC91_000496  carboxymethylenebutenolidase [KO:K01061] [EC:3.1.1.45]
DSC91_001108  nitrile hydratase subunit alpha [KO:K01721] [EC:4.2.1.84]
DSC91_001109  nitrile hydratase [KO:K20807] [EC:4.2.1.84]
DSC91_003621  maleylacetate reductase [KO:K00217] [EC:1.3.1.32]
DSC91_007510  maleylacetate reductase [KO:K00217] [EC:1.3.1.32]
DSC91_001043  Maleylacetate reductase [KO:K00217] [EC:1.3.1.32]
Compound
C00090  Catechol
C02222  2-Maleylacetate
C02357  2-Chlorobenzoate
C02359  2-Fluorobenzoate
C02364  3-Fluorobenzoate
C02370  4-Chlorobenzoate
C02371  4-Fluorobenzoate
C02802  4-Fluorobenzoyl-CoA
C02949  4-Hydroxybenzoyl-CoA
C03925  3,5-Dibromo-4-hydroxybenzoate
C04178  Bromoxynil
C06387  4-Chlorobenzoyl-CoA
C06670  2,4-Dichlorobenzoate
C06671  2,4-Dichlorobenzoyl-CoA
C11272  Fluorobenzene
C16246  3,5-Dibromo-4-hydroxybenzamide
C16247  2,6-Dibromophenol
C16248  2,6-Dibromohydroquinone
C16249  2-Bromomaleylacetate
C16472  3-Fluorocatechol
C16473  4-Fluorocatechol
C16474  3-Fluoro-cis,cis-muconate
C16475  2-Fluoro-cis,cis-muconate
C16476  4-Fluoromuconolactone
C16477  5-Fluoromuconolactone
C16478  3-Fluorocyclohexadiene-cis,cis-1,2-diol-1-carboxylate
C16479  5-Fluorocyclohexadiene-cis,cis-1,2-diol-1-carboxylate
C16480  4-Fluorocyclohexadiene-cis,cis-1,2-diol-1-carboxylate
C16481  6-Fluorocyclohexadiene-cis,cis-1,2-diol-1-carboxylate
C16482  2-Fluorocyclohexadiene-cis,cis-1,2-diol-1-carboxylate
C16483  4-Fluorocyclohexadiene-cis,cis-1,2-diol
C16484  1-Fluorocyclohexadiene-cis,cis-1,2-diol
Reference
PMID:16345496
  Authors
Schreiber A, Hellwig M, Dorn E, Reineke W, Knackmuss HJ.
  Title
Critical Reactions in Fluorobenzoic Acid Degradation by Pseudomonas sp. B13.
  Journal
Appl Environ Microbiol 39:58-67 (1980)
DOI:10.1128/AEM.39.1.58-67.1980
Reference
PMID:12957954
  Authors
Solyanikova IP, Moiseeva OV, Boeren S, Boersma MG, Kolomytseva MP, Vervoort J, Rietjens IM, Golovleva LA, van Berkel WJ.
  Title
Conversion of 2-fluoromuconate to cis-dienelactone by purified enzymes of Rhodococcus opacus 1cp.
  Journal
Appl Environ Microbiol 69:5636-42 (2003)
DOI:10.1128/AEM.69.9.5636-5642.2003
Reference
PMID:16980423
  Authors
Carvalho MF, Ferreira MI, Moreira IS, Castro PM, Janssen DB.
  Title
Degradation of fluorobenzene by Rhizobiales strain F11 via ortho cleavage of 4-fluorocatechol and catechol.
  Journal
Appl Environ Microbiol 72:7413-7 (2006)
DOI:10.1128/AEM.01162-06
Reference
PMID:18355280
  Authors
Chae JC, Song B, Zylstra GJ
  Title
Identification of genes coding for hydrolytic dehalogenation in the metagenome derived from a denitrifying 4-chlorobenzoate degrading consortium.
  Journal
FEMS Microbiol Lett 281:203-9 (2008)
DOI:10.1111/j.1574-6968.2008.01106.x
Reference
  Authors
Rosenbrock P, Munch JC, Scheunert I, Dorfler U.
  Title
Biodegradation of the herbicide bromoxynil and its plant cell wall bound residues in an agricultural soil.
  Journal
Pestic Biochem Physiol 78:49-57 (2004)
DOI:10.1016/j.pestbp.2003.09.002
Reference
PMID:1610174
  Authors
Topp E, Xun LY, Orser CS.
  Title
Biodegradation of the herbicide bromoxynil (3,5-dibromo-4-hydroxybenzonitrile) by purified pentachlorophenol hydroxylase and whole cells of Flavobacterium sp. strain ATCC 39723 is accompanied by cyanogenesis.
  Journal
Appl Environ Microbiol 58:502-6 (1992)
DOI:10.1128/AEM.58.2.502-506.1992
Related
pathway
pcaf00362  Benzoate degradation
pcaf00621  Dioxin degradation
KO pathway
ko00364   
LinkDB

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