PATHWAY: pcav01100 Help Entry pcav01100                   Pathway                                 Name Metabolic pathways - Pseudomonas cavernae Class BRITE hierarchy Pathway map pcav01100   Metabolic pathways Module pcav_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pcav01100] pcav_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pcav01100] pcav_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pcav01100] pcav_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pcav01100] pcav_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pcav01100] pcav_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pcav01100] pcav_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pcav01100] pcav_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pcav01100] pcav_M00012   Glyoxylate cycle [PATH:pcav01100] pcav_M00015   Proline biosynthesis, glutamate => proline [PATH:pcav01100] pcav_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pcav01100] pcav_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pcav01100] pcav_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pcav01100] pcav_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pcav01100] pcav_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pcav01100] pcav_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pcav01100] pcav_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pcav01100] pcav_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pcav01100] pcav_M00034   Methionine salvage pathway [PATH:pcav01100] pcav_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pcav01100] pcav_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pcav01100] pcav_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:pcav01100] pcav_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pcav01100] pcav_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pcav01100] pcav_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pcav01100] pcav_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pcav01100] pcav_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pcav01100] pcav_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pcav01100] pcav_M00063   CMP-KDO biosynthesis [PATH:pcav01100] pcav_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pcav01100] pcav_M00082   Fatty acid biosynthesis, initiation [PATH:pcav01100] pcav_M00083   Fatty acid biosynthesis, elongation [PATH:pcav01100] pcav_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pcav01100] pcav_M00087   beta-Oxidation [PATH:pcav01100] pcav_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pcav01100] pcav_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pcav01100] pcav_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pcav01100] pcav_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pcav01100] pcav_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pcav01100] pcav_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pcav01100] pcav_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pcav01100] pcav_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pcav01100] pcav_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pcav01100] pcav_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pcav01100] pcav_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pcav01100] pcav_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pcav01100] pcav_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pcav01100] pcav_M00149   Succinate dehydrogenase, prokaryotes [PATH:pcav01100] pcav_M00151   Cytochrome bc1 complex respiratory unit [PATH:pcav01100] pcav_M00155   Cytochrome c oxidase, prokaryotes [PATH:pcav01100] pcav_M00156   Cytochrome c oxidase, cbb3-type [PATH:pcav01100] pcav_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pcav01100] pcav_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pcav01100] pcav_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pcav01100] pcav_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pcav01100] pcav_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pcav01100] pcav_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pcav01100] pcav_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pcav01100] pcav_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pcav01100] pcav_M00555   Betaine biosynthesis, choline => betaine [PATH:pcav01100] pcav_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pcav01100] pcav_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pcav01100] pcav_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pcav01100] pcav_M00621   Glycine cleavage system [PATH:pcav01100] pcav_M00793   dTDP-L-rhamnose biosynthesis [PATH:pcav01100] pcav_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pcav01100] pcav_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pcav01100] pcav_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pcav01100] pcav_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pcav01100] pcav_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pcav01100] pcav_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pcav01100] pcav_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pcav01100] pcav_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pcav01100] pcav_M00970   Proline degradation, proline => glutamate [PATH:pcav01100] pcav_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:pcav01100] Organism Pseudomonas cavernae [GN:pcav] Related pathway pcav00010   Glycolysis / Gluconeogenesis pcav00020   Citrate cycle (TCA cycle) pcav00030   Pentose phosphate pathway pcav00040   Pentose and glucuronate interconversions pcav00051   Fructose and mannose metabolism pcav00052   Galactose metabolism pcav00061   Fatty acid biosynthesis pcav00071   Fatty acid degradation pcav00121   Secondary bile acid biosynthesis pcav00130   Ubiquinone and other terpenoid-quinone biosynthesis pcav00190   Oxidative phosphorylation pcav00220   Arginine biosynthesis pcav00230   Purine metabolism pcav00240   Pyrimidine metabolism pcav00250   Alanine, aspartate and glutamate metabolism pcav00260   Glycine, serine and threonine metabolism pcav00261   Monobactam biosynthesis pcav00270   Cysteine and methionine metabolism pcav00280   Valine, leucine and isoleucine degradation pcav00290   Valine, leucine and isoleucine biosynthesis pcav00300   Lysine biosynthesis pcav00310   Lysine degradation pcav00330   Arginine and proline metabolism pcav00331   Clavulanic acid biosynthesis pcav00332   Carbapenem biosynthesis pcav00340   Histidine metabolism pcav00350   Tyrosine metabolism pcav00360   Phenylalanine metabolism pcav00361   Chlorocyclohexane and chlorobenzene degradation pcav00362   Benzoate degradation pcav00364   Fluorobenzoate degradation pcav00380   Tryptophan metabolism pcav00400   Phenylalanine, tyrosine and tryptophan biosynthesis pcav00401   Novobiocin biosynthesis pcav00410   beta-Alanine metabolism pcav00430   Taurine and hypotaurine metabolism pcav00440   Phosphonate and phosphinate metabolism pcav00450   Selenocompound metabolism pcav00460   Cyanoamino acid metabolism pcav00470   D-Amino acid metabolism pcav00480   Glutathione metabolism pcav00500   Starch and sucrose metabolism pcav00520   Amino sugar and nucleotide sugar metabolism pcav00521   Streptomycin biosynthesis pcav00523   Polyketide sugar unit biosynthesis pcav00525   Acarbose and validamycin biosynthesis pcav00540   Lipopolysaccharide biosynthesis pcav00541   O-Antigen nucleotide sugar biosynthesis pcav00543   Exopolysaccharide biosynthesis pcav00550   Peptidoglycan biosynthesis pcav00552   Teichoic acid biosynthesis pcav00561   Glycerolipid metabolism pcav00562   Inositol phosphate metabolism pcav00564   Glycerophospholipid metabolism pcav00592   alpha-Linolenic acid metabolism pcav00620   Pyruvate metabolism pcav00621   Dioxin degradation pcav00622   Xylene degradation pcav00623   Toluene degradation pcav00625   Chloroalkane and chloroalkene degradation pcav00626   Naphthalene degradation pcav00627   Aminobenzoate degradation pcav00630   Glyoxylate and dicarboxylate metabolism pcav00633   Nitrotoluene degradation pcav00640   Propanoate metabolism pcav00643   Styrene degradation pcav00650   Butanoate metabolism pcav00660   C5-Branched dibasic acid metabolism pcav00670   One carbon pool by folate pcav00680   Methane metabolism pcav00710   Carbon fixation by Calvin cycle pcav00720   Other carbon fixation pathways pcav00730   Thiamine metabolism pcav00740   Riboflavin metabolism pcav00750   Vitamin B6 metabolism pcav00760   Nicotinate and nicotinamide metabolism pcav00770   Pantothenate and CoA biosynthesis pcav00780   Biotin metabolism pcav00785   Lipoic acid metabolism pcav00790   Folate biosynthesis pcav00791   Atrazine degradation pcav00860   Porphyrin metabolism pcav00900   Terpenoid backbone biosynthesis pcav00903   Limonene degradation pcav00907   Pinene, camphor and geraniol degradation pcav00910   Nitrogen metabolism pcav00920   Sulfur metabolism pcav00930   Caprolactam degradation pcav00946   Degradation of flavonoids pcav00984   Steroid degradation pcav00999   Biosynthesis of various plant secondary metabolites pcav01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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