KEGG   PATHWAY: pch01100
Entry
pch01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas chlororaphis PA23
Class
Pathway map
pch01100  Metabolic pathways
pch01100

Module
pch_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pch01100]
pch_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pch01100]
pch_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pch01100]
pch_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pch01100]
pch_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pch01100]
pch_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pch01100]
pch_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pch01100]
pch_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pch01100]
pch_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pch01100]
pch_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pch01100]
pch_M00015  Proline biosynthesis, glutamate => proline [PATH:pch01100]
pch_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pch01100]
pch_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pch01100]
pch_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pch01100]
pch_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pch01100]
pch_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pch01100]
pch_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pch01100]
pch_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pch01100]
pch_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pch01100]
pch_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pch01100]
pch_M00035  Methionine degradation [PATH:pch01100]
pch_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pch01100]
pch_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pch01100]
pch_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pch01100]
pch_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pch01100]
pch_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pch01100]
pch_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pch01100]
pch_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pch01100]
pch_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pch01100]
pch_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pch01100]
pch_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pch01100]
pch_M00063  CMP-KDO biosynthesis [PATH:pch01100]
pch_M00082  Fatty acid biosynthesis, initiation [PATH:pch01100]
pch_M00083  Fatty acid biosynthesis, elongation [PATH:pch01100]
pch_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pch01100]
pch_M00087  beta-Oxidation [PATH:pch01100]
pch_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pch01100]
pch_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pch01100]
pch_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pch01100]
pch_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pch01100]
pch_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pch01100]
pch_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pch01100]
pch_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pch01100]
pch_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pch01100]
pch_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pch01100]
pch_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pch01100]
pch_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pch01100]
pch_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pch01100]
pch_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:pch01100]
pch_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pch01100]
pch_M00149  Succinate dehydrogenase, prokaryotes [PATH:pch01100]
pch_M00151  Cytochrome bc1 complex respiratory unit [PATH:pch01100]
pch_M00155  Cytochrome c oxidase, prokaryotes [PATH:pch01100]
pch_M00156  Cytochrome c oxidase, cbb3-type [PATH:pch01100]
pch_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pch01100]
pch_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pch01100]
pch_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pch01100]
pch_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pch01100]
pch_M00417  Cytochrome o ubiquinol oxidase [PATH:pch01100]
pch_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pch01100]
pch_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pch01100]
pch_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pch01100]
pch_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pch01100]
pch_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pch01100]
pch_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pch01100]
pch_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pch01100]
pch_M00555  Betaine biosynthesis, choline => betaine [PATH:pch01100]
pch_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pch01100]
pch_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pch01100]
pch_M00621  Glycine cleavage system [PATH:pch01100]
pch_M00637  Anthranilate degradation, anthranilate => catechol [PATH:pch01100]
pch_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pch01100]
pch_M00790  Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:pch01100]
pch_M00793  dTDP-L-rhamnose biosynthesis [PATH:pch01100]
pch_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pch01100]
pch_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pch01100]
pch_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pch01100]
pch_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pch01100]
pch_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pch01100]
pch_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pch01100]
pch_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pch01100]
pch_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pch01100]
pch_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pch01100]
pch_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pch01100]
pch_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pch01100]
pch_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pch01100]
pch_M00970  Proline degradation, proline => glutamate [PATH:pch01100]
pch_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pch01100]
Organism
Pseudomonas chlororaphis PA23 [GN:pch]
Related
pathway
pch00010  Glycolysis / Gluconeogenesis
pch00020  Citrate cycle (TCA cycle)
pch00030  Pentose phosphate pathway
pch00040  Pentose and glucuronate interconversions
pch00051  Fructose and mannose metabolism
pch00052  Galactose metabolism
pch00053  Ascorbate and aldarate metabolism
pch00061  Fatty acid biosynthesis
pch00071  Fatty acid degradation
pch00130  Ubiquinone and other terpenoid-quinone biosynthesis
pch00190  Oxidative phosphorylation
pch00220  Arginine biosynthesis
pch00230  Purine metabolism
pch00240  Pyrimidine metabolism
pch00250  Alanine, aspartate and glutamate metabolism
pch00260  Glycine, serine and threonine metabolism
pch00261  Monobactam biosynthesis
pch00270  Cysteine and methionine metabolism
pch00280  Valine, leucine and isoleucine degradation
pch00290  Valine, leucine and isoleucine biosynthesis
pch00300  Lysine biosynthesis
pch00310  Lysine degradation
pch00330  Arginine and proline metabolism
pch00332  Carbapenem biosynthesis
pch00340  Histidine metabolism
pch00350  Tyrosine metabolism
pch00360  Phenylalanine metabolism
pch00361  Chlorocyclohexane and chlorobenzene degradation
pch00362  Benzoate degradation
pch00364  Fluorobenzoate degradation
pch00380  Tryptophan metabolism
pch00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pch00401  Novobiocin biosynthesis
pch00404  Staurosporine biosynthesis
pch00405  Phenazine biosynthesis
pch00410  beta-Alanine metabolism
pch00430  Taurine and hypotaurine metabolism
pch00440  Phosphonate and phosphinate metabolism
pch00450  Selenocompound metabolism
pch00460  Cyanoamino acid metabolism
pch00470  D-Amino acid metabolism
pch00480  Glutathione metabolism
pch00500  Starch and sucrose metabolism
pch00520  Amino sugar and nucleotide sugar metabolism
pch00521  Streptomycin biosynthesis
pch00523  Polyketide sugar unit biosynthesis
pch00525  Acarbose and validamycin biosynthesis
pch00540  Lipopolysaccharide biosynthesis
pch00541  O-Antigen nucleotide sugar biosynthesis
pch00543  Exopolysaccharide biosynthesis
pch00550  Peptidoglycan biosynthesis
pch00552  Teichoic acid biosynthesis
pch00561  Glycerolipid metabolism
pch00562  Inositol phosphate metabolism
pch00564  Glycerophospholipid metabolism
pch00565  Ether lipid metabolism
pch00592  alpha-Linolenic acid metabolism
pch00620  Pyruvate metabolism
pch00621  Dioxin degradation
pch00622  Xylene degradation
pch00623  Toluene degradation
pch00625  Chloroalkane and chloroalkene degradation
pch00626  Naphthalene degradation
pch00627  Aminobenzoate degradation
pch00630  Glyoxylate and dicarboxylate metabolism
pch00633  Nitrotoluene degradation
pch00640  Propanoate metabolism
pch00643  Styrene degradation
pch00650  Butanoate metabolism
pch00660  C5-Branched dibasic acid metabolism
pch00670  One carbon pool by folate
pch00680  Methane metabolism
pch00730  Thiamine metabolism
pch00740  Riboflavin metabolism
pch00750  Vitamin B6 metabolism
pch00760  Nicotinate and nicotinamide metabolism
pch00770  Pantothenate and CoA biosynthesis
pch00780  Biotin metabolism
pch00785  Lipoic acid metabolism
pch00790  Folate biosynthesis
pch00791  Atrazine degradation
pch00860  Porphyrin metabolism
pch00900  Terpenoid backbone biosynthesis
pch00906  Carotenoid biosynthesis
pch00907  Pinene, camphor and geraniol degradation
pch00910  Nitrogen metabolism
pch00920  Sulfur metabolism
pch00930  Caprolactam degradation
pch00946  Degradation of flavonoids
pch00996  Biosynthesis of various alkaloids
pch00997  Biosynthesis of various other secondary metabolites
pch00999  Biosynthesis of various plant secondary metabolites
pch01040  Biosynthesis of unsaturated fatty acids
pch01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system