KEGG   PATHWAY: pcib01100
Entry
pcib01100                   Pathway                                
Name
Metabolic pathways - Proteus terrae subsp. cibarius
Class
Pathway map
pcib01100  Metabolic pathways
pcib01100

Module
pcib_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pcib01100]
pcib_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pcib01100]
pcib_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pcib01100]
pcib_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pcib01100]
pcib_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pcib01100]
pcib_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pcib01100]
pcib_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pcib01100]
pcib_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pcib01100]
pcib_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pcib01100]
pcib_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pcib01100]
pcib_M00012  Glyoxylate cycle [PATH:pcib01100]
pcib_M00015  Proline biosynthesis, glutamate => proline [PATH:pcib01100]
pcib_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pcib01100]
pcib_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pcib01100]
pcib_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pcib01100]
pcib_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pcib01100]
pcib_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pcib01100]
pcib_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pcib01100]
pcib_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pcib01100]
pcib_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pcib01100]
pcib_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pcib01100]
pcib_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pcib01100]
pcib_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pcib01100]
pcib_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pcib01100]
pcib_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pcib01100]
pcib_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pcib01100]
pcib_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pcib01100]
pcib_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pcib01100]
pcib_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pcib01100]
pcib_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pcib01100]
pcib_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pcib01100]
pcib_M00063  CMP-KDO biosynthesis [PATH:pcib01100]
pcib_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pcib01100]
pcib_M00082  Fatty acid biosynthesis, initiation [PATH:pcib01100]
pcib_M00083  Fatty acid biosynthesis, elongation [PATH:pcib01100]
pcib_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pcib01100]
pcib_M00087  beta-Oxidation [PATH:pcib01100]
pcib_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pcib01100]
pcib_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pcib01100]
pcib_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pcib01100]
pcib_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pcib01100]
pcib_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pcib01100]
pcib_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pcib01100]
pcib_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pcib01100]
pcib_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pcib01100]
pcib_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pcib01100]
pcib_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pcib01100]
pcib_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pcib01100]
pcib_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pcib01100]
pcib_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pcib01100]
pcib_M00140  C1-unit interconversion, prokaryotes [PATH:pcib01100]
pcib_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pcib01100]
pcib_M00149  Succinate dehydrogenase, prokaryotes [PATH:pcib01100]
pcib_M00150  Fumarate reductase, prokaryotes [PATH:pcib01100]
pcib_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pcib01100]
pcib_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pcib01100]
pcib_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pcib01100]
pcib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pcib01100]
pcib_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pcib01100]
pcib_M00417  Cytochrome o ubiquinol oxidase [PATH:pcib01100]
pcib_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pcib01100]
pcib_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:pcib01100]
pcib_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pcib01100]
pcib_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pcib01100]
pcib_M00555  Betaine biosynthesis, choline => betaine [PATH:pcib01100]
pcib_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pcib01100]
pcib_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pcib01100]
pcib_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pcib01100]
pcib_M00621  Glycine cleavage system [PATH:pcib01100]
pcib_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pcib01100]
pcib_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pcib01100]
pcib_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pcib01100]
pcib_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pcib01100]
pcib_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pcib01100]
pcib_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pcib01100]
pcib_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pcib01100]
pcib_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pcib01100]
pcib_M00970  Proline degradation, proline => glutamate [PATH:pcib01100]
Organism
Proteus terrae subsp. cibarius [GN:pcib]
Related
pathway
pcib00010  Glycolysis / Gluconeogenesis
pcib00020  Citrate cycle (TCA cycle)
pcib00030  Pentose phosphate pathway
pcib00040  Pentose and glucuronate interconversions
pcib00051  Fructose and mannose metabolism
pcib00052  Galactose metabolism
pcib00053  Ascorbate and aldarate metabolism
pcib00061  Fatty acid biosynthesis
pcib00071  Fatty acid degradation
pcib00130  Ubiquinone and other terpenoid-quinone biosynthesis
pcib00190  Oxidative phosphorylation
pcib00220  Arginine biosynthesis
pcib00230  Purine metabolism
pcib00240  Pyrimidine metabolism
pcib00250  Alanine, aspartate and glutamate metabolism
pcib00253  Tetracycline biosynthesis
pcib00260  Glycine, serine and threonine metabolism
pcib00261  Monobactam biosynthesis
pcib00270  Cysteine and methionine metabolism
pcib00280  Valine, leucine and isoleucine degradation
pcib00290  Valine, leucine and isoleucine biosynthesis
pcib00300  Lysine biosynthesis
pcib00310  Lysine degradation
pcib00330  Arginine and proline metabolism
pcib00332  Carbapenem biosynthesis
pcib00340  Histidine metabolism
pcib00350  Tyrosine metabolism
pcib00360  Phenylalanine metabolism
pcib00362  Benzoate degradation
pcib00380  Tryptophan metabolism
pcib00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pcib00401  Novobiocin biosynthesis
pcib00410  beta-Alanine metabolism
pcib00430  Taurine and hypotaurine metabolism
pcib00450  Selenocompound metabolism
pcib00460  Cyanoamino acid metabolism
pcib00470  D-Amino acid metabolism
pcib00480  Glutathione metabolism
pcib00500  Starch and sucrose metabolism
pcib00520  Amino sugar and nucleotide sugar metabolism
pcib00521  Streptomycin biosynthesis
pcib00523  Polyketide sugar unit biosynthesis
pcib00525  Acarbose and validamycin biosynthesis
pcib00540  Lipopolysaccharide biosynthesis
pcib00541  O-Antigen nucleotide sugar biosynthesis
pcib00542  O-Antigen repeat unit biosynthesis
pcib00543  Exopolysaccharide biosynthesis
pcib00550  Peptidoglycan biosynthesis
pcib00552  Teichoic acid biosynthesis
pcib00561  Glycerolipid metabolism
pcib00562  Inositol phosphate metabolism
pcib00564  Glycerophospholipid metabolism
pcib00565  Ether lipid metabolism
pcib00592  alpha-Linolenic acid metabolism
pcib00620  Pyruvate metabolism
pcib00625  Chloroalkane and chloroalkene degradation
pcib00626  Naphthalene degradation
pcib00627  Aminobenzoate degradation
pcib00630  Glyoxylate and dicarboxylate metabolism
pcib00633  Nitrotoluene degradation
pcib00640  Propanoate metabolism
pcib00650  Butanoate metabolism
pcib00660  C5-Branched dibasic acid metabolism
pcib00670  One carbon pool by folate
pcib00680  Methane metabolism
pcib00710  Carbon fixation by Calvin cycle
pcib00720  Other carbon fixation pathways
pcib00730  Thiamine metabolism
pcib00740  Riboflavin metabolism
pcib00750  Vitamin B6 metabolism
pcib00760  Nicotinate and nicotinamide metabolism
pcib00770  Pantothenate and CoA biosynthesis
pcib00780  Biotin metabolism
pcib00785  Lipoic acid metabolism
pcib00790  Folate biosynthesis
pcib00860  Porphyrin metabolism
pcib00900  Terpenoid backbone biosynthesis
pcib00907  Pinene, camphor and geraniol degradation
pcib00910  Nitrogen metabolism
pcib00920  Sulfur metabolism
pcib00930  Caprolactam degradation
pcib00999  Biosynthesis of various plant secondary metabolites
pcib01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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