KEGG   PATHWAY: pcz00907
Entry
pcz00907                    Pathway                                
Name
Pinene, camphor and geraniol degradation - Pseudomonas chlororaphis PCL1606
Class
Metabolism; Metabolism of terpenoids and polyketides
Pathway map
pcz00907  Pinene, camphor and geraniol degradation
pcz00907

Other DBs
GO: 0033074 0019383 1903447
Organism
Pseudomonas chlororaphis PCL1606 [GN:pcz]
Gene
PCL1606_31540  2,3-dehydroadipyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
PCL1606_30900  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
PCL1606_57070  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
PCL1606_40950  multifunctional fatty acid oxidation complex subunit alpha [KO:K01825] [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
PCL1606_41990  3-hydroxyacyl-CoA dehydrogenase [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
PCL1606_19700  2,4-dienoyl-CoA reductase [KO:K13774]
PCL1606_05260  short-chain dehydrogenase [KO:K13775]
PCL1606_18280  long-chain acyl-CoA synthetase [KO:K13776] [EC:6.2.1.-]
PCL1606_19680  acyl-CoA dehydrogenase [KO:K11731] [EC:1.3.99.-]
PCL1606_19660  3-methylcrotonyl-CoA carboxylase subunit alpha [KO:K13777] [EC:6.4.1.5]
PCL1606_19690  methylcrotonoyl-CoA carboxylase [KO:K13778] [EC:6.4.1.5]
PCL1606_19670  enoyl-CoA hydratase [KO:K13779] [EC:4.2.1.57]
PCL1606_23150  hydroxymethylglutaryl-CoA lyase [KO:K01640] [EC:4.1.3.4]
PCL1606_18430  acetyl-CoA acetyltransferase [KO:K00632] [EC:2.3.1.16]
PCL1606_40940  3-ketoacyl-CoA thiolase [KO:K00632] [EC:2.3.1.16]
Compound
C00024  Acetyl-CoA
C00630  2-Methylpropanoyl-CoA
C00808  (+)-Camphor
C00809  (-)-Camphor
C01291  3-(4-Methylpent-3-en-1-yl)pent-2-enedioyl-CoA
C01499  Geranial
C01500  Geraniol
C01920  Geranoyl-CoA
C02759  alpha-Pinene-oxide
C02952  5-Oxo-1,2-campholide
C03037  (+)-Bornane-2,5-dione
C03069  3-Methylcrotonyl-CoA
C03448  (+)-exo-5-Hydroxycamphor
C04435  (Z)-2-Methyl-5-isopropylhexa-2,5-dienal
C04675  3-Hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA
C07160  [(1R)-2,2,3-Trimethyl-5-oxocyclopent-3-enyl]acetyl-CoA
C09847  cis-Citral
C09848  (R)-(+)-Citronellal
C09849  beta-Citronellol
C09871  Nerol
C09880  alpha-Pinene
C09884  Pinocarvone
C11384  (S)-(-)-Citronellal
C11386  (-)-Citronellol
C11938  Myrtenol
C11939  Myrtenal
C11940  Myrtenic acid
C11941  Pinocarveol
C11942  trans-2-Methyl-5-isopropylhexa-2,5-dienal
C11943  trans-2-Methyl-5-isopropylhexa-2,5-dienoic acid
C11944  cis-2-Methyl-5-isopropylhexa-2,5-dienoic acid
C11945  trans-2-Methyl-5-isopropylhexa-2,5-dienoyl-CoA
C11946  cis-2-Methyl-5-isopropylhexa-2,5-dienoyl-CoA
C11947  3-Hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA
C11948  2,6-Dimethyl-5-methylene-3-oxo-heptanoyl-CoA
C11949  3-Isopropylbut-3-enoyl-CoA
C11950  3-Isopropyl-3-butenoic acid
C16461  Geranic acid
C16462  Citronellate
C16464  Citronellyl-CoA
C16465  trans-Geranyl-CoA
C16466  7-Methyl-3-oxo-6-octenoyl-CoA
C16468  (2E)-5-Methylhexa-2,4-dienoyl-CoA
C16469  3-Hydroxy-5-methylhex-4-enoyl-CoA
C16470  5-Methylhex-4-enoyl-CoA
C16471  5-Methyl-3-oxo-4-hexenoyl-CoA
C20271  [(1R)-2,2,3-Trimethyl-5-oxocyclopent-3-enyl]acetate
C20320  Bornane-2,6-dione
C20321  [(2R)-3,3,4-Trimethyl-6-oxo-3,6-dihydro-1H-pyran-2-yl]acetyl-CoA
C20322  (+)-6-exo-Hydroxycamphor
C20323  (+)-6-endo-Hydroxycamphor
C20324  [(1S)-4-Hydroxy-2,2,3-trimethylcyclopent-3-enyl]acetate
C21929  (-)-Bornane-2,5-dione
C21930  (-)-5-Oxo-1,2-campholide
C22610  (-)-3-exo-Hydroxycamphor
Reference
PMID:11778886
  Authors
Wolken WA, van der Werf MJ.
  Title
Geraniol biotransformation-pathway in spores of Penicillium digitatum.
  Journal
Appl Microbiol Biotechnol 57:731-7 (2001)
DOI:10.1007/s002530100821
Reference
PMID:16272386
  Authors
Hoschle B, Gnau V, Jendrossek D.
  Title
Methylcrotonyl-CoA and geranyl-CoA carboxylases are involved in leucine/isovalerate utilization (Liu) and acyclic terpene utilization (Atu), and are encoded by liuB/liuD and atuC/atuF, in Pseudomonas aeruginosa.
  Journal
Microbiology 151:3649-56 (2005)
DOI:10.1099/mic.0.28260-0
Reference
PMID:16820476
  Authors
Forster-Fromme K, Hoschle B, Mack C, Bott M, Armbruster W, Jendrossek D
  Title
Identification of genes and proteins necessary for catabolism of acyclic terpenes and leucine/isovalerate in Pseudomonas aeruginosa.
  Journal
Appl Environ Microbiol 72:4819-28 (2006)
DOI:10.1128/AEM.00853-06
Reference
PMID:16000717
  Authors
Hoschle B, Jendrossek D.
  Title
Utilization of geraniol is dependent on molybdenum in Pseudomonas aeruginosa: evidence for different metabolic routes for oxidation of geraniol and citronellol.
  Journal
Microbiology 151:2277-83 (2005)
DOI:10.1099/mic.0.27957-0
Reference
PMID:681275
  Authors
Cantwell SG, Lau EP, Watt DS, Fall RR.
  Title
Biodegradation of acyclic isoprenoids by Pseudomonas species.
  Journal
J Bacteriol 135:324-33 (1978)
DOI:10.1128/JB.135.2.324-333.1978
Reference
PMID:19597963
  Authors
Chavez-Aviles M, Diaz-Perez AL, Campos-Garcia J
  Title
The bifunctional role of LiuE from Pseudomonas aeruginosa, displays additionally HIHG-CoA lyase enzymatic activity.
  Journal
Mol Biol Rep 37:1787-91 (2010)
DOI:10.1007/s11033-009-9611-6
Reference
PMID:3667521
  Authors
Griffiths ET, Bociek SM, Harries PC, Jeffcoat R, Sissons DJ, Trudgill PW
  Title
Bacterial metabolism of alpha-pinene: pathway from alpha-pinene oxide to acyclic metabolites in Nocardia sp. strain P18.3.
  Journal
J Bacteriol 169:4972-9 (1987)
DOI:10.1128/jb.169.11.4972-4979.1987
Reference
PMID:15346763
  Authors
Roberts GA, Grogan G, Turner NJ, Flitsch SL
  Title
Nucleotide sequence of a portion of the camphor-degrading gene cluster from Rhodococcus sp. NCIMB 9784.
  Journal
DNA Seq 15:96-103 (2004)
DOI:10.1080/10425170310001656765
Related
pathway
pcz00280  Valine, leucine and isoleucine degradation
KO pathway
ko00907   
LinkDB

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