KEGG   PATHWAY: pdim01100
Entry
pdim01100                   Pathway                                
Name
Metabolic pathways - Paracoccus sediminicola
Class
Pathway map
pdim01100  Metabolic pathways
pdim01100

Module
pdim_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdim01100]
pdim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdim01100]
pdim_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pdim01100]
pdim_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pdim01100]
pdim_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pdim01100]
pdim_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pdim01100]
pdim_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pdim01100]
pdim_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pdim01100]
pdim_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pdim01100]
pdim_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pdim01100]
pdim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pdim01100]
pdim_M00012  Glyoxylate cycle [PATH:pdim01100]
pdim_M00015  Proline biosynthesis, glutamate => proline [PATH:pdim01100]
pdim_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pdim01100]
pdim_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pdim01100]
pdim_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pdim01100]
pdim_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pdim01100]
pdim_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pdim01100]
pdim_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pdim01100]
pdim_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pdim01100]
pdim_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pdim01100]
pdim_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:pdim01100]
pdim_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pdim01100]
pdim_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pdim01100]
pdim_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pdim01100]
pdim_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pdim01100]
pdim_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pdim01100]
pdim_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pdim01100]
pdim_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pdim01100]
pdim_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pdim01100]
pdim_M00082  Fatty acid biosynthesis, initiation [PATH:pdim01100]
pdim_M00083  Fatty acid biosynthesis, elongation [PATH:pdim01100]
pdim_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pdim01100]
pdim_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pdim01100]
pdim_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pdim01100]
pdim_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pdim01100]
pdim_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pdim01100]
pdim_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pdim01100]
pdim_M00149  Succinate dehydrogenase, prokaryotes [PATH:pdim01100]
pdim_M00155  Cytochrome c oxidase, prokaryotes [PATH:pdim01100]
pdim_M00156  Cytochrome c oxidase, cbb3-type [PATH:pdim01100]
pdim_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pdim01100]
pdim_M00169  CAM (Crassulacean acid metabolism), light [PATH:pdim01100]
pdim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdim01100]
pdim_M00417  Cytochrome o ubiquinol oxidase [PATH:pdim01100]
pdim_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pdim01100]
pdim_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pdim01100]
pdim_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pdim01100]
pdim_M00621  Glycine cleavage system [PATH:pdim01100]
pdim_M00793  dTDP-L-rhamnose biosynthesis [PATH:pdim01100]
pdim_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pdim01100]
pdim_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pdim01100]
pdim_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pdim01100]
pdim_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pdim01100]
pdim_M00919  Ectoine degradation, ectoine => aspartate [PATH:pdim01100]
pdim_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pdim01100]
pdim_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pdim01100]
pdim_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pdim01100]
pdim_M00970  Proline degradation, proline => glutamate [PATH:pdim01100]
Organism
Paracoccus sediminicola [GN:pdim]
Related
pathway
pdim00010  Glycolysis / Gluconeogenesis
pdim00020  Citrate cycle (TCA cycle)
pdim00030  Pentose phosphate pathway
pdim00040  Pentose and glucuronate interconversions
pdim00051  Fructose and mannose metabolism
pdim00052  Galactose metabolism
pdim00053  Ascorbate and aldarate metabolism
pdim00061  Fatty acid biosynthesis
pdim00071  Fatty acid degradation
pdim00121  Secondary bile acid biosynthesis
pdim00130  Ubiquinone and other terpenoid-quinone biosynthesis
pdim00190  Oxidative phosphorylation
pdim00220  Arginine biosynthesis
pdim00230  Purine metabolism
pdim00240  Pyrimidine metabolism
pdim00250  Alanine, aspartate and glutamate metabolism
pdim00260  Glycine, serine and threonine metabolism
pdim00261  Monobactam biosynthesis
pdim00270  Cysteine and methionine metabolism
pdim00280  Valine, leucine and isoleucine degradation
pdim00290  Valine, leucine and isoleucine biosynthesis
pdim00300  Lysine biosynthesis
pdim00310  Lysine degradation
pdim00330  Arginine and proline metabolism
pdim00332  Carbapenem biosynthesis
pdim00340  Histidine metabolism
pdim00350  Tyrosine metabolism
pdim00360  Phenylalanine metabolism
pdim00362  Benzoate degradation
pdim00380  Tryptophan metabolism
pdim00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pdim00401  Novobiocin biosynthesis
pdim00410  beta-Alanine metabolism
pdim00430  Taurine and hypotaurine metabolism
pdim00440  Phosphonate and phosphinate metabolism
pdim00450  Selenocompound metabolism
pdim00460  Cyanoamino acid metabolism
pdim00470  D-Amino acid metabolism
pdim00480  Glutathione metabolism
pdim00500  Starch and sucrose metabolism
pdim00520  Amino sugar and nucleotide sugar metabolism
pdim00521  Streptomycin biosynthesis
pdim00523  Polyketide sugar unit biosynthesis
pdim00525  Acarbose and validamycin biosynthesis
pdim00540  Lipopolysaccharide biosynthesis
pdim00541  O-Antigen nucleotide sugar biosynthesis
pdim00543  Exopolysaccharide biosynthesis
pdim00550  Peptidoglycan biosynthesis
pdim00552  Teichoic acid biosynthesis
pdim00561  Glycerolipid metabolism
pdim00562  Inositol phosphate metabolism
pdim00564  Glycerophospholipid metabolism
pdim00600  Sphingolipid metabolism
pdim00620  Pyruvate metabolism
pdim00625  Chloroalkane and chloroalkene degradation
pdim00626  Naphthalene degradation
pdim00627  Aminobenzoate degradation
pdim00630  Glyoxylate and dicarboxylate metabolism
pdim00640  Propanoate metabolism
pdim00643  Styrene degradation
pdim00650  Butanoate metabolism
pdim00660  C5-Branched dibasic acid metabolism
pdim00670  One carbon pool by folate
pdim00680  Methane metabolism
pdim00710  Carbon fixation by Calvin cycle
pdim00720  Other carbon fixation pathways
pdim00730  Thiamine metabolism
pdim00740  Riboflavin metabolism
pdim00750  Vitamin B6 metabolism
pdim00760  Nicotinate and nicotinamide metabolism
pdim00770  Pantothenate and CoA biosynthesis
pdim00780  Biotin metabolism
pdim00785  Lipoic acid metabolism
pdim00790  Folate biosynthesis
pdim00860  Porphyrin metabolism
pdim00900  Terpenoid backbone biosynthesis
pdim00907  Pinene, camphor and geraniol degradation
pdim00910  Nitrogen metabolism
pdim00920  Sulfur metabolism
pdim00930  Caprolactam degradation
pdim00946  Degradation of flavonoids
pdim00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system