PATHWAY: pdu01100 Help Entry pdu01100                    Pathway                                 Name Metabolic pathways - Paenibacillus durus Class BRITE hierarchy Pathway map pdu01100   Metabolic pathways Module pdu_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdu01100] pdu_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pdu01100] pdu_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pdu01100] pdu_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pdu01100] pdu_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pdu01100] pdu_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pdu01100] pdu_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pdu01100] pdu_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pdu01100] pdu_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pdu01100] pdu_M00015   Proline biosynthesis, glutamate => proline [PATH:pdu01100] pdu_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pdu01100] pdu_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pdu01100] pdu_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pdu01100] pdu_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pdu01100] pdu_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pdu01100] pdu_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pdu01100] pdu_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pdu01100] pdu_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pdu01100] pdu_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pdu01100] pdu_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pdu01100] pdu_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pdu01100] pdu_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pdu01100] pdu_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pdu01100] pdu_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pdu01100] pdu_M00082   Fatty acid biosynthesis, initiation [PATH:pdu01100] pdu_M00083   Fatty acid biosynthesis, elongation [PATH:pdu01100] pdu_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:pdu01100] pdu_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pdu01100] pdu_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pdu01100] pdu_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pdu01100] pdu_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pdu01100] pdu_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pdu01100] pdu_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pdu01100] pdu_M00140   C1-unit interconversion, prokaryotes [PATH:pdu01100] pdu_M00151   Cytochrome bc1 complex respiratory unit [PATH:pdu01100] pdu_M00155   Cytochrome c oxidase, prokaryotes [PATH:pdu01100] pdu_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pdu01100] pdu_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:pdu01100] pdu_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdu01100] pdu_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:pdu01100] pdu_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:pdu01100] pdu_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:pdu01100] pdu_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pdu01100] pdu_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pdu01100] pdu_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pdu01100] pdu_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pdu01100] pdu_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pdu01100] pdu_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pdu01100] pdu_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:pdu01100] pdu_M00621   Glycine cleavage system [PATH:pdu01100] pdu_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pdu01100] pdu_M00793   dTDP-L-rhamnose biosynthesis [PATH:pdu01100] pdu_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pdu01100] pdu_M00847   Heme biosynthesis, archaea, siroheme => heme [PATH:pdu01100] pdu_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pdu01100] pdu_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pdu01100] pdu_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:pdu01100] pdu_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pdu01100] pdu_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pdu01100] pdu_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:pdu01100] pdu_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pdu01100] pdu_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pdu01100] Organism Paenibacillus durus [GN:pdu] Related pathway pdu00010   Glycolysis / Gluconeogenesis pdu00020   Citrate cycle (TCA cycle) pdu00030   Pentose phosphate pathway pdu00040   Pentose and glucuronate interconversions pdu00051   Fructose and mannose metabolism pdu00052   Galactose metabolism pdu00053   Ascorbate and aldarate metabolism pdu00061   Fatty acid biosynthesis pdu00071   Fatty acid degradation pdu00074   Mycolic acid biosynthesis pdu00130   Ubiquinone and other terpenoid-quinone biosynthesis pdu00190   Oxidative phosphorylation pdu00220   Arginine biosynthesis pdu00230   Purine metabolism pdu00240   Pyrimidine metabolism pdu00250   Alanine, aspartate and glutamate metabolism pdu00260   Glycine, serine and threonine metabolism pdu00261   Monobactam biosynthesis pdu00270   Cysteine and methionine metabolism pdu00280   Valine, leucine and isoleucine degradation pdu00290   Valine, leucine and isoleucine biosynthesis pdu00300   Lysine biosynthesis pdu00310   Lysine degradation pdu00330   Arginine and proline metabolism pdu00332   Carbapenem biosynthesis pdu00340   Histidine metabolism pdu00350   Tyrosine metabolism pdu00360   Phenylalanine metabolism pdu00361   Chlorocyclohexane and chlorobenzene degradation pdu00362   Benzoate degradation pdu00380   Tryptophan metabolism pdu00400   Phenylalanine, tyrosine and tryptophan biosynthesis pdu00401   Novobiocin biosynthesis pdu00410   beta-Alanine metabolism pdu00430   Taurine and hypotaurine metabolism pdu00450   Selenocompound metabolism pdu00460   Cyanoamino acid metabolism pdu00470   D-Amino acid metabolism pdu00480   Glutathione metabolism pdu00500   Starch and sucrose metabolism pdu00514   Other types of O-glycan biosynthesis pdu00515   Mannose type O-glycan biosynthesis pdu00520   Amino sugar and nucleotide sugar metabolism pdu00521   Streptomycin biosynthesis pdu00523   Polyketide sugar unit biosynthesis pdu00525   Acarbose and validamycin biosynthesis pdu00541   O-Antigen nucleotide sugar biosynthesis pdu00542   O-Antigen repeat unit biosynthesis pdu00543   Exopolysaccharide biosynthesis pdu00550   Peptidoglycan biosynthesis pdu00552   Teichoic acid biosynthesis pdu00561   Glycerolipid metabolism pdu00562   Inositol phosphate metabolism pdu00564   Glycerophospholipid metabolism pdu00600   Sphingolipid metabolism pdu00620   Pyruvate metabolism pdu00625   Chloroalkane and chloroalkene degradation pdu00626   Naphthalene degradation pdu00627   Aminobenzoate degradation pdu00630   Glyoxylate and dicarboxylate metabolism pdu00633   Nitrotoluene degradation pdu00640   Propanoate metabolism pdu00643   Styrene degradation pdu00650   Butanoate metabolism pdu00660   C5-Branched dibasic acid metabolism pdu00670   One carbon pool by folate pdu00680   Methane metabolism pdu00710   Carbon fixation by Calvin cycle pdu00720   Other carbon fixation pathways pdu00730   Thiamine metabolism pdu00740   Riboflavin metabolism pdu00750   Vitamin B6 metabolism pdu00760   Nicotinate and nicotinamide metabolism pdu00770   Pantothenate and CoA biosynthesis pdu00780   Biotin metabolism pdu00785   Lipoic acid metabolism pdu00790   Folate biosynthesis pdu00860   Porphyrin metabolism pdu00900   Terpenoid backbone biosynthesis pdu00910   Nitrogen metabolism pdu00920   Sulfur metabolism pdu00946   Degradation of flavonoids pdu00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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