KEGG   PATHWAY: pdw01100
Entry
pdw01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas donghuensis
Class
Pathway map
pdw01100  Metabolic pathways
pdw01100

Module
pdw_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdw01100]
pdw_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pdw01100]
pdw_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pdw01100]
pdw_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pdw01100]
pdw_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pdw01100]
pdw_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pdw01100]
pdw_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pdw01100]
pdw_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pdw01100]
pdw_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pdw01100]
pdw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pdw01100]
pdw_M00015  Proline biosynthesis, glutamate => proline [PATH:pdw01100]
pdw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pdw01100]
pdw_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pdw01100]
pdw_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pdw01100]
pdw_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pdw01100]
pdw_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pdw01100]
pdw_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pdw01100]
pdw_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pdw01100]
pdw_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pdw01100]
pdw_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pdw01100]
pdw_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pdw01100]
pdw_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pdw01100]
pdw_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pdw01100]
pdw_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pdw01100]
pdw_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pdw01100]
pdw_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pdw01100]
pdw_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pdw01100]
pdw_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pdw01100]
pdw_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pdw01100]
pdw_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pdw01100]
pdw_M00063  CMP-KDO biosynthesis [PATH:pdw01100]
pdw_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pdw01100]
pdw_M00082  Fatty acid biosynthesis, initiation [PATH:pdw01100]
pdw_M00083  Fatty acid biosynthesis, elongation [PATH:pdw01100]
pdw_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pdw01100]
pdw_M00087  beta-Oxidation [PATH:pdw01100]
pdw_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pdw01100]
pdw_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pdw01100]
pdw_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pdw01100]
pdw_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pdw01100]
pdw_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pdw01100]
pdw_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pdw01100]
pdw_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pdw01100]
pdw_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pdw01100]
pdw_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pdw01100]
pdw_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pdw01100]
pdw_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pdw01100]
pdw_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pdw01100]
pdw_M00149  Succinate dehydrogenase, prokaryotes [PATH:pdw01100]
pdw_M00151  Cytochrome bc1 complex respiratory unit [PATH:pdw01100]
pdw_M00155  Cytochrome c oxidase, prokaryotes [PATH:pdw01100]
pdw_M00156  Cytochrome c oxidase, cbb3-type [PATH:pdw01100]
pdw_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pdw01100]
pdw_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pdw01100]
pdw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdw01100]
pdw_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pdw01100]
pdw_M00417  Cytochrome o ubiquinol oxidase [PATH:pdw01100]
pdw_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pdw01100]
pdw_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pdw01100]
pdw_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pdw01100]
pdw_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pdw01100]
pdw_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pdw01100]
pdw_M00555  Betaine biosynthesis, choline => betaine [PATH:pdw01100]
pdw_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pdw01100]
pdw_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pdw01100]
pdw_M00621  Glycine cleavage system [PATH:pdw01100]
pdw_M00793  dTDP-L-rhamnose biosynthesis [PATH:pdw01100]
pdw_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pdw01100]
pdw_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pdw01100]
pdw_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pdw01100]
pdw_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pdw01100]
pdw_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pdw01100]
pdw_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pdw01100]
pdw_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pdw01100]
pdw_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pdw01100]
pdw_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pdw01100]
pdw_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pdw01100]
pdw_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pdw01100]
pdw_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pdw01100]
pdw_M00970  Proline degradation, proline => glutamate [PATH:pdw01100]
pdw_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pdw01100]
Organism
Pseudomonas donghuensis [GN:pdw]
Related
pathway
pdw00010  Glycolysis / Gluconeogenesis
pdw00020  Citrate cycle (TCA cycle)
pdw00030  Pentose phosphate pathway
pdw00040  Pentose and glucuronate interconversions
pdw00051  Fructose and mannose metabolism
pdw00052  Galactose metabolism
pdw00053  Ascorbate and aldarate metabolism
pdw00061  Fatty acid biosynthesis
pdw00071  Fatty acid degradation
pdw00130  Ubiquinone and other terpenoid-quinone biosynthesis
pdw00190  Oxidative phosphorylation
pdw00220  Arginine biosynthesis
pdw00230  Purine metabolism
pdw00240  Pyrimidine metabolism
pdw00250  Alanine, aspartate and glutamate metabolism
pdw00260  Glycine, serine and threonine metabolism
pdw00261  Monobactam biosynthesis
pdw00270  Cysteine and methionine metabolism
pdw00280  Valine, leucine and isoleucine degradation
pdw00290  Valine, leucine and isoleucine biosynthesis
pdw00300  Lysine biosynthesis
pdw00310  Lysine degradation
pdw00330  Arginine and proline metabolism
pdw00332  Carbapenem biosynthesis
pdw00340  Histidine metabolism
pdw00350  Tyrosine metabolism
pdw00360  Phenylalanine metabolism
pdw00361  Chlorocyclohexane and chlorobenzene degradation
pdw00362  Benzoate degradation
pdw00364  Fluorobenzoate degradation
pdw00380  Tryptophan metabolism
pdw00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pdw00401  Novobiocin biosynthesis
pdw00410  beta-Alanine metabolism
pdw00430  Taurine and hypotaurine metabolism
pdw00440  Phosphonate and phosphinate metabolism
pdw00450  Selenocompound metabolism
pdw00460  Cyanoamino acid metabolism
pdw00470  D-Amino acid metabolism
pdw00480  Glutathione metabolism
pdw00500  Starch and sucrose metabolism
pdw00520  Amino sugar and nucleotide sugar metabolism
pdw00521  Streptomycin biosynthesis
pdw00523  Polyketide sugar unit biosynthesis
pdw00525  Acarbose and validamycin biosynthesis
pdw00540  Lipopolysaccharide biosynthesis
pdw00541  O-Antigen nucleotide sugar biosynthesis
pdw00543  Exopolysaccharide biosynthesis
pdw00550  Peptidoglycan biosynthesis
pdw00552  Teichoic acid biosynthesis
pdw00561  Glycerolipid metabolism
pdw00562  Inositol phosphate metabolism
pdw00564  Glycerophospholipid metabolism
pdw00592  alpha-Linolenic acid metabolism
pdw00620  Pyruvate metabolism
pdw00622  Xylene degradation
pdw00623  Toluene degradation
pdw00625  Chloroalkane and chloroalkene degradation
pdw00626  Naphthalene degradation
pdw00627  Aminobenzoate degradation
pdw00630  Glyoxylate and dicarboxylate metabolism
pdw00633  Nitrotoluene degradation
pdw00640  Propanoate metabolism
pdw00643  Styrene degradation
pdw00650  Butanoate metabolism
pdw00660  C5-Branched dibasic acid metabolism
pdw00670  One carbon pool by folate
pdw00680  Methane metabolism
pdw00710  Carbon fixation by Calvin cycle
pdw00720  Other carbon fixation pathways
pdw00730  Thiamine metabolism
pdw00740  Riboflavin metabolism
pdw00750  Vitamin B6 metabolism
pdw00760  Nicotinate and nicotinamide metabolism
pdw00770  Pantothenate and CoA biosynthesis
pdw00780  Biotin metabolism
pdw00785  Lipoic acid metabolism
pdw00790  Folate biosynthesis
pdw00860  Porphyrin metabolism
pdw00900  Terpenoid backbone biosynthesis
pdw00906  Carotenoid biosynthesis
pdw00907  Pinene, camphor and geraniol degradation
pdw00910  Nitrogen metabolism
pdw00920  Sulfur metabolism
pdw00930  Caprolactam degradation
pdw00946  Degradation of flavonoids
pdw00997  Biosynthesis of various other secondary metabolites
pdw00999  Biosynthesis of various plant secondary metabolites
pdw01040  Biosynthesis of unsaturated fatty acids
pdw01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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