KEGG   PATHWAY: pdy01100
Entry
pdy01100                    Pathway                                
Name
Metabolic pathways - Paenibacillus dendritiformis
Class
Pathway map
pdy01100  Metabolic pathways
pdy01100

Module
pdy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdy01100]
pdy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdy01100]
pdy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pdy01100]
pdy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pdy01100]
pdy_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pdy01100]
pdy_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pdy01100]
pdy_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pdy01100]
pdy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pdy01100]
pdy_M00012  Glyoxylate cycle [PATH:pdy01100]
pdy_M00015  Proline biosynthesis, glutamate => proline [PATH:pdy01100]
pdy_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pdy01100]
pdy_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pdy01100]
pdy_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pdy01100]
pdy_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pdy01100]
pdy_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pdy01100]
pdy_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pdy01100]
pdy_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pdy01100]
pdy_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pdy01100]
pdy_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:pdy01100]
pdy_M00034  Methionine salvage pathway [PATH:pdy01100]
pdy_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pdy01100]
pdy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pdy01100]
pdy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pdy01100]
pdy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pdy01100]
pdy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pdy01100]
pdy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pdy01100]
pdy_M00082  Fatty acid biosynthesis, initiation [PATH:pdy01100]
pdy_M00083  Fatty acid biosynthesis, elongation [PATH:pdy01100]
pdy_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pdy01100]
pdy_M00087  beta-Oxidation [PATH:pdy01100]
pdy_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pdy01100]
pdy_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pdy01100]
pdy_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pdy01100]
pdy_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pdy01100]
pdy_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pdy01100]
pdy_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pdy01100]
pdy_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pdy01100]
pdy_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pdy01100]
pdy_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pdy01100]
pdy_M00140  C1-unit interconversion, prokaryotes [PATH:pdy01100]
pdy_M00151  Cytochrome bc1 complex respiratory unit [PATH:pdy01100]
pdy_M00155  Cytochrome c oxidase, prokaryotes [PATH:pdy01100]
pdy_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pdy01100]
pdy_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pdy01100]
pdy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdy01100]
pdy_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pdy01100]
pdy_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:pdy01100]
pdy_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pdy01100]
pdy_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:pdy01100]
pdy_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pdy01100]
pdy_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pdy01100]
pdy_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pdy01100]
pdy_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pdy01100]
pdy_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pdy01100]
pdy_M00621  Glycine cleavage system [PATH:pdy01100]
pdy_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pdy01100]
pdy_M00793  dTDP-L-rhamnose biosynthesis [PATH:pdy01100]
pdy_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pdy01100]
pdy_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pdy01100]
pdy_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:pdy01100]
pdy_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pdy01100]
pdy_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pdy01100]
pdy_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:pdy01100]
pdy_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pdy01100]
pdy_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pdy01100]
pdy_M00970  Proline degradation, proline => glutamate [PATH:pdy01100]
pdy_M00972  Proline metabolism [PATH:pdy01100]
Organism
Paenibacillus dendritiformis [GN:pdy]
Related
pathway
pdy00010  Glycolysis / Gluconeogenesis
pdy00020  Citrate cycle (TCA cycle)
pdy00030  Pentose phosphate pathway
pdy00040  Pentose and glucuronate interconversions
pdy00051  Fructose and mannose metabolism
pdy00052  Galactose metabolism
pdy00053  Ascorbate and aldarate metabolism
pdy00061  Fatty acid biosynthesis
pdy00071  Fatty acid degradation
pdy00130  Ubiquinone and other terpenoid-quinone biosynthesis
pdy00190  Oxidative phosphorylation
pdy00220  Arginine biosynthesis
pdy00230  Purine metabolism
pdy00240  Pyrimidine metabolism
pdy00250  Alanine, aspartate and glutamate metabolism
pdy00260  Glycine, serine and threonine metabolism
pdy00261  Monobactam biosynthesis
pdy00270  Cysteine and methionine metabolism
pdy00280  Valine, leucine and isoleucine degradation
pdy00290  Valine, leucine and isoleucine biosynthesis
pdy00300  Lysine biosynthesis
pdy00310  Lysine degradation
pdy00311  Penicillin and cephalosporin biosynthesis
pdy00330  Arginine and proline metabolism
pdy00332  Carbapenem biosynthesis
pdy00340  Histidine metabolism
pdy00350  Tyrosine metabolism
pdy00360  Phenylalanine metabolism
pdy00361  Chlorocyclohexane and chlorobenzene degradation
pdy00362  Benzoate degradation
pdy00380  Tryptophan metabolism
pdy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pdy00401  Novobiocin biosynthesis
pdy00410  beta-Alanine metabolism
pdy00430  Taurine and hypotaurine metabolism
pdy00450  Selenocompound metabolism
pdy00460  Cyanoamino acid metabolism
pdy00470  D-Amino acid metabolism
pdy00480  Glutathione metabolism
pdy00500  Starch and sucrose metabolism
pdy00511  Other glycan degradation
pdy00520  Amino sugar and nucleotide sugar metabolism
pdy00521  Streptomycin biosynthesis
pdy00523  Polyketide sugar unit biosynthesis
pdy00525  Acarbose and validamycin biosynthesis
pdy00541  O-Antigen nucleotide sugar biosynthesis
pdy00542  O-Antigen repeat unit biosynthesis
pdy00543  Exopolysaccharide biosynthesis
pdy00550  Peptidoglycan biosynthesis
pdy00552  Teichoic acid biosynthesis
pdy00561  Glycerolipid metabolism
pdy00562  Inositol phosphate metabolism
pdy00564  Glycerophospholipid metabolism
pdy00592  alpha-Linolenic acid metabolism
pdy00600  Sphingolipid metabolism
pdy00620  Pyruvate metabolism
pdy00621  Dioxin degradation
pdy00622  Xylene degradation
pdy00623  Toluene degradation
pdy00625  Chloroalkane and chloroalkene degradation
pdy00626  Naphthalene degradation
pdy00627  Aminobenzoate degradation
pdy00630  Glyoxylate and dicarboxylate metabolism
pdy00640  Propanoate metabolism
pdy00643  Styrene degradation
pdy00650  Butanoate metabolism
pdy00660  C5-Branched dibasic acid metabolism
pdy00670  One carbon pool by folate
pdy00680  Methane metabolism
pdy00710  Carbon fixation by Calvin cycle
pdy00720  Other carbon fixation pathways
pdy00730  Thiamine metabolism
pdy00740  Riboflavin metabolism
pdy00750  Vitamin B6 metabolism
pdy00760  Nicotinate and nicotinamide metabolism
pdy00770  Pantothenate and CoA biosynthesis
pdy00780  Biotin metabolism
pdy00785  Lipoic acid metabolism
pdy00790  Folate biosynthesis
pdy00860  Porphyrin metabolism
pdy00900  Terpenoid backbone biosynthesis
pdy00907  Pinene, camphor and geraniol degradation
pdy00910  Nitrogen metabolism
pdy00920  Sulfur metabolism
pdy00946  Degradation of flavonoids
pdy00999  Biosynthesis of various plant secondary metabolites
pdy01051  Biosynthesis of ansamycins
pdy01053  Biosynthesis of siderophore group nonribosomal peptides
pdy01056  Biosynthesis of type II polyketide backbone
KO pathway
ko01100   
LinkDB

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