KEGG   PATHWAY: pem01100
Entry
pem01100                    Pathway                                
Name
Metabolic pathways - Pelagibacterium flavum
Class
Pathway map
pem01100  Metabolic pathways
pem01100

Module
pem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pem01100]
pem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pem01100]
pem_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pem01100]
pem_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pem01100]
pem_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pem01100]
pem_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pem01100]
pem_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pem01100]
pem_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pem01100]
pem_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pem01100]
pem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pem01100]
pem_M00012  Glyoxylate cycle [PATH:pem01100]
pem_M00015  Proline biosynthesis, glutamate => proline [PATH:pem01100]
pem_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pem01100]
pem_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pem01100]
pem_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pem01100]
pem_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pem01100]
pem_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pem01100]
pem_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pem01100]
pem_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pem01100]
pem_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:pem01100]
pem_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pem01100]
pem_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pem01100]
pem_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pem01100]
pem_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pem01100]
pem_M00082  Fatty acid biosynthesis, initiation [PATH:pem01100]
pem_M00083  Fatty acid biosynthesis, elongation [PATH:pem01100]
pem_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pem01100]
pem_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pem01100]
pem_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pem01100]
pem_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pem01100]
pem_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pem01100]
pem_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pem01100]
pem_M00149  Succinate dehydrogenase, prokaryotes [PATH:pem01100]
pem_M00151  Cytochrome bc1 complex respiratory unit [PATH:pem01100]
pem_M00155  Cytochrome c oxidase, prokaryotes [PATH:pem01100]
pem_M00156  Cytochrome c oxidase, cbb3-type [PATH:pem01100]
pem_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pem01100]
pem_M00169  CAM (Crassulacean acid metabolism), light [PATH:pem01100]
pem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pem01100]
pem_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pem01100]
pem_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pem01100]
pem_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pem01100]
pem_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pem01100]
pem_M00621  Glycine cleavage system [PATH:pem01100]
pem_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pem01100]
pem_M00793  dTDP-L-rhamnose biosynthesis [PATH:pem01100]
pem_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pem01100]
pem_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pem01100]
pem_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pem01100]
pem_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pem01100]
pem_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pem01100]
pem_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pem01100]
pem_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pem01100]
pem_M00970  Proline degradation, proline => glutamate [PATH:pem01100]
Organism
Pelagibacterium flavum [GN:pem]
Related
pathway
pem00010  Glycolysis / Gluconeogenesis
pem00020  Citrate cycle (TCA cycle)
pem00030  Pentose phosphate pathway
pem00040  Pentose and glucuronate interconversions
pem00051  Fructose and mannose metabolism
pem00052  Galactose metabolism
pem00053  Ascorbate and aldarate metabolism
pem00061  Fatty acid biosynthesis
pem00071  Fatty acid degradation
pem00130  Ubiquinone and other terpenoid-quinone biosynthesis
pem00190  Oxidative phosphorylation
pem00220  Arginine biosynthesis
pem00230  Purine metabolism
pem00240  Pyrimidine metabolism
pem00250  Alanine, aspartate and glutamate metabolism
pem00260  Glycine, serine and threonine metabolism
pem00261  Monobactam biosynthesis
pem00270  Cysteine and methionine metabolism
pem00280  Valine, leucine and isoleucine degradation
pem00290  Valine, leucine and isoleucine biosynthesis
pem00300  Lysine biosynthesis
pem00310  Lysine degradation
pem00330  Arginine and proline metabolism
pem00332  Carbapenem biosynthesis
pem00340  Histidine metabolism
pem00350  Tyrosine metabolism
pem00360  Phenylalanine metabolism
pem00361  Chlorocyclohexane and chlorobenzene degradation
pem00362  Benzoate degradation
pem00380  Tryptophan metabolism
pem00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pem00401  Novobiocin biosynthesis
pem00405  Phenazine biosynthesis
pem00410  beta-Alanine metabolism
pem00430  Taurine and hypotaurine metabolism
pem00450  Selenocompound metabolism
pem00460  Cyanoamino acid metabolism
pem00470  D-Amino acid metabolism
pem00480  Glutathione metabolism
pem00500  Starch and sucrose metabolism
pem00511  Other glycan degradation
pem00520  Amino sugar and nucleotide sugar metabolism
pem00521  Streptomycin biosynthesis
pem00523  Polyketide sugar unit biosynthesis
pem00525  Acarbose and validamycin biosynthesis
pem00540  Lipopolysaccharide biosynthesis
pem00541  O-Antigen nucleotide sugar biosynthesis
pem00543  Exopolysaccharide biosynthesis
pem00550  Peptidoglycan biosynthesis
pem00552  Teichoic acid biosynthesis
pem00561  Glycerolipid metabolism
pem00562  Inositol phosphate metabolism
pem00564  Glycerophospholipid metabolism
pem00600  Sphingolipid metabolism
pem00620  Pyruvate metabolism
pem00622  Xylene degradation
pem00625  Chloroalkane and chloroalkene degradation
pem00626  Naphthalene degradation
pem00627  Aminobenzoate degradation
pem00630  Glyoxylate and dicarboxylate metabolism
pem00640  Propanoate metabolism
pem00643  Styrene degradation
pem00650  Butanoate metabolism
pem00660  C5-Branched dibasic acid metabolism
pem00670  One carbon pool by folate
pem00680  Methane metabolism
pem00710  Carbon fixation by Calvin cycle
pem00720  Other carbon fixation pathways
pem00730  Thiamine metabolism
pem00740  Riboflavin metabolism
pem00750  Vitamin B6 metabolism
pem00760  Nicotinate and nicotinamide metabolism
pem00770  Pantothenate and CoA biosynthesis
pem00780  Biotin metabolism
pem00785  Lipoic acid metabolism
pem00790  Folate biosynthesis
pem00791  Atrazine degradation
pem00860  Porphyrin metabolism
pem00900  Terpenoid backbone biosynthesis
pem00906  Carotenoid biosynthesis
pem00907  Pinene, camphor and geraniol degradation
pem00910  Nitrogen metabolism
pem00920  Sulfur metabolism
pem00930  Caprolactam degradation
pem00946  Degradation of flavonoids
pem00999  Biosynthesis of various plant secondary metabolites
pem01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
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