KEGG   PATHWAY: pfb01100
Entry
pfb01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas synxantha LBUM223
Class
Pathway map
pfb01100  Metabolic pathways
pfb01100

Module
pfb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfb01100]
pfb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfb01100]
pfb_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfb01100]
pfb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pfb01100]
pfb_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfb01100]
pfb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfb01100]
pfb_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfb01100]
pfb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfb01100]
pfb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfb01100]
pfb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfb01100]
pfb_M00015  Proline biosynthesis, glutamate => proline [PATH:pfb01100]
pfb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfb01100]
pfb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfb01100]
pfb_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pfb01100]
pfb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pfb01100]
pfb_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pfb01100]
pfb_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfb01100]
pfb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pfb01100]
pfb_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pfb01100]
pfb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pfb01100]
pfb_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pfb01100]
pfb_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pfb01100]
pfb_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pfb01100]
pfb_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfb01100]
pfb_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pfb01100]
pfb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfb01100]
pfb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfb01100]
pfb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfb01100]
pfb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfb01100]
pfb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfb01100]
pfb_M00063  CMP-KDO biosynthesis [PATH:pfb01100]
pfb_M00082  Fatty acid biosynthesis, initiation [PATH:pfb01100]
pfb_M00083  Fatty acid biosynthesis, elongation [PATH:pfb01100]
pfb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pfb01100]
pfb_M00087  beta-Oxidation [PATH:pfb01100]
pfb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfb01100]
pfb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfb01100]
pfb_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfb01100]
pfb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pfb01100]
pfb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfb01100]
pfb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfb01100]
pfb_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfb01100]
pfb_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfb01100]
pfb_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfb01100]
pfb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfb01100]
pfb_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfb01100]
pfb_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pfb01100]
pfb_M00149  Succinate dehydrogenase, prokaryotes [PATH:pfb01100]
pfb_M00151  Cytochrome bc1 complex respiratory unit [PATH:pfb01100]
pfb_M00155  Cytochrome c oxidase, prokaryotes [PATH:pfb01100]
pfb_M00156  Cytochrome c oxidase, cbb3-type [PATH:pfb01100]
pfb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pfb01100]
pfb_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pfb01100]
pfb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfb01100]
pfb_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pfb01100]
pfb_M00417  Cytochrome o ubiquinol oxidase [PATH:pfb01100]
pfb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfb01100]
pfb_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pfb01100]
pfb_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pfb01100]
pfb_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfb01100]
pfb_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pfb01100]
pfb_M00555  Betaine biosynthesis, choline => betaine [PATH:pfb01100]
pfb_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pfb01100]
pfb_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pfb01100]
pfb_M00621  Glycine cleavage system [PATH:pfb01100]
pfb_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:pfb01100]
pfb_M00637  Anthranilate degradation, anthranilate => catechol [PATH:pfb01100]
pfb_M00793  dTDP-L-rhamnose biosynthesis [PATH:pfb01100]
pfb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pfb01100]
pfb_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pfb01100]
pfb_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pfb01100]
pfb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfb01100]
pfb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfb01100]
pfb_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pfb01100]
pfb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pfb01100]
pfb_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pfb01100]
pfb_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pfb01100]
pfb_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pfb01100]
pfb_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pfb01100]
pfb_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pfb01100]
pfb_M00970  Proline degradation, proline => glutamate [PATH:pfb01100]
pfb_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pfb01100]
Organism
Pseudomonas synxantha LBUM223 [GN:pfb]
Related
pathway
pfb00010  Glycolysis / Gluconeogenesis
pfb00020  Citrate cycle (TCA cycle)
pfb00030  Pentose phosphate pathway
pfb00040  Pentose and glucuronate interconversions
pfb00051  Fructose and mannose metabolism
pfb00052  Galactose metabolism
pfb00053  Ascorbate and aldarate metabolism
pfb00061  Fatty acid biosynthesis
pfb00071  Fatty acid degradation
pfb00130  Ubiquinone and other terpenoid-quinone biosynthesis
pfb00190  Oxidative phosphorylation
pfb00220  Arginine biosynthesis
pfb00230  Purine metabolism
pfb00240  Pyrimidine metabolism
pfb00250  Alanine, aspartate and glutamate metabolism
pfb00260  Glycine, serine and threonine metabolism
pfb00261  Monobactam biosynthesis
pfb00270  Cysteine and methionine metabolism
pfb00280  Valine, leucine and isoleucine degradation
pfb00290  Valine, leucine and isoleucine biosynthesis
pfb00300  Lysine biosynthesis
pfb00310  Lysine degradation
pfb00330  Arginine and proline metabolism
pfb00332  Carbapenem biosynthesis
pfb00340  Histidine metabolism
pfb00350  Tyrosine metabolism
pfb00360  Phenylalanine metabolism
pfb00361  Chlorocyclohexane and chlorobenzene degradation
pfb00362  Benzoate degradation
pfb00364  Fluorobenzoate degradation
pfb00380  Tryptophan metabolism
pfb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pfb00401  Novobiocin biosynthesis
pfb00405  Phenazine biosynthesis
pfb00410  beta-Alanine metabolism
pfb00430  Taurine and hypotaurine metabolism
pfb00440  Phosphonate and phosphinate metabolism
pfb00450  Selenocompound metabolism
pfb00460  Cyanoamino acid metabolism
pfb00470  D-Amino acid metabolism
pfb00480  Glutathione metabolism
pfb00500  Starch and sucrose metabolism
pfb00520  Amino sugar and nucleotide sugar metabolism
pfb00521  Streptomycin biosynthesis
pfb00523  Polyketide sugar unit biosynthesis
pfb00525  Acarbose and validamycin biosynthesis
pfb00540  Lipopolysaccharide biosynthesis
pfb00541  O-Antigen nucleotide sugar biosynthesis
pfb00543  Exopolysaccharide biosynthesis
pfb00550  Peptidoglycan biosynthesis
pfb00552  Teichoic acid biosynthesis
pfb00561  Glycerolipid metabolism
pfb00562  Inositol phosphate metabolism
pfb00564  Glycerophospholipid metabolism
pfb00565  Ether lipid metabolism
pfb00592  alpha-Linolenic acid metabolism
pfb00620  Pyruvate metabolism
pfb00623  Toluene degradation
pfb00625  Chloroalkane and chloroalkene degradation
pfb00626  Naphthalene degradation
pfb00627  Aminobenzoate degradation
pfb00630  Glyoxylate and dicarboxylate metabolism
pfb00633  Nitrotoluene degradation
pfb00640  Propanoate metabolism
pfb00643  Styrene degradation
pfb00650  Butanoate metabolism
pfb00660  C5-Branched dibasic acid metabolism
pfb00670  One carbon pool by folate
pfb00680  Methane metabolism
pfb00710  Carbon fixation by Calvin cycle
pfb00720  Other carbon fixation pathways
pfb00730  Thiamine metabolism
pfb00740  Riboflavin metabolism
pfb00750  Vitamin B6 metabolism
pfb00760  Nicotinate and nicotinamide metabolism
pfb00770  Pantothenate and CoA biosynthesis
pfb00780  Biotin metabolism
pfb00785  Lipoic acid metabolism
pfb00790  Folate biosynthesis
pfb00791  Atrazine degradation
pfb00860  Porphyrin metabolism
pfb00900  Terpenoid backbone biosynthesis
pfb00907  Pinene, camphor and geraniol degradation
pfb00910  Nitrogen metabolism
pfb00920  Sulfur metabolism
pfb00930  Caprolactam degradation
pfb00946  Degradation of flavonoids
pfb00999  Biosynthesis of various plant secondary metabolites
pfb01040  Biosynthesis of unsaturated fatty acids
pfb01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system