KEGG   PATHWAY: pfn01100
Entry
pfn01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas fluorescens UK4
Class
Pathway map
pfn01100  Metabolic pathways
pfn01100

Module
pfn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfn01100]
pfn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfn01100]
pfn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfn01100]
pfn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pfn01100]
pfn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfn01100]
pfn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfn01100]
pfn_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfn01100]
pfn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfn01100]
pfn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfn01100]
pfn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfn01100]
pfn_M00015  Proline biosynthesis, glutamate => proline [PATH:pfn01100]
pfn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfn01100]
pfn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfn01100]
pfn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pfn01100]
pfn_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pfn01100]
pfn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pfn01100]
pfn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfn01100]
pfn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pfn01100]
pfn_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pfn01100]
pfn_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pfn01100]
pfn_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pfn01100]
pfn_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pfn01100]
pfn_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pfn01100]
pfn_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfn01100]
pfn_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pfn01100]
pfn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfn01100]
pfn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfn01100]
pfn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfn01100]
pfn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfn01100]
pfn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfn01100]
pfn_M00063  CMP-KDO biosynthesis [PATH:pfn01100]
pfn_M00082  Fatty acid biosynthesis, initiation [PATH:pfn01100]
pfn_M00083  Fatty acid biosynthesis, elongation [PATH:pfn01100]
pfn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pfn01100]
pfn_M00087  beta-Oxidation [PATH:pfn01100]
pfn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfn01100]
pfn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfn01100]
pfn_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfn01100]
pfn_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pfn01100]
pfn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfn01100]
pfn_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfn01100]
pfn_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfn01100]
pfn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfn01100]
pfn_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfn01100]
pfn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfn01100]
pfn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfn01100]
pfn_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pfn01100]
pfn_M00149  Succinate dehydrogenase, prokaryotes [PATH:pfn01100]
pfn_M00151  Cytochrome bc1 complex respiratory unit [PATH:pfn01100]
pfn_M00155  Cytochrome c oxidase, prokaryotes [PATH:pfn01100]
pfn_M00156  Cytochrome c oxidase, cbb3-type [PATH:pfn01100]
pfn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pfn01100]
pfn_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pfn01100]
pfn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfn01100]
pfn_M00417  Cytochrome o ubiquinol oxidase [PATH:pfn01100]
pfn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfn01100]
pfn_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pfn01100]
pfn_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pfn01100]
pfn_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfn01100]
pfn_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pfn01100]
pfn_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pfn01100]
pfn_M00555  Betaine biosynthesis, choline => betaine [PATH:pfn01100]
pfn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pfn01100]
pfn_M00621  Glycine cleavage system [PATH:pfn01100]
pfn_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pfn01100]
pfn_M00793  dTDP-L-rhamnose biosynthesis [PATH:pfn01100]
pfn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pfn01100]
pfn_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pfn01100]
pfn_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pfn01100]
pfn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfn01100]
pfn_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfn01100]
pfn_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pfn01100]
pfn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pfn01100]
pfn_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pfn01100]
pfn_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pfn01100]
pfn_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pfn01100]
pfn_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pfn01100]
pfn_M00970  Proline degradation, proline => glutamate [PATH:pfn01100]
pfn_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pfn01100]
Organism
Pseudomonas fluorescens UK4 [GN:pfn]
Related
pathway
pfn00010  Glycolysis / Gluconeogenesis
pfn00020  Citrate cycle (TCA cycle)
pfn00030  Pentose phosphate pathway
pfn00040  Pentose and glucuronate interconversions
pfn00051  Fructose and mannose metabolism
pfn00052  Galactose metabolism
pfn00053  Ascorbate and aldarate metabolism
pfn00061  Fatty acid biosynthesis
pfn00071  Fatty acid degradation
pfn00130  Ubiquinone and other terpenoid-quinone biosynthesis
pfn00190  Oxidative phosphorylation
pfn00220  Arginine biosynthesis
pfn00230  Purine metabolism
pfn00240  Pyrimidine metabolism
pfn00250  Alanine, aspartate and glutamate metabolism
pfn00260  Glycine, serine and threonine metabolism
pfn00261  Monobactam biosynthesis
pfn00270  Cysteine and methionine metabolism
pfn00280  Valine, leucine and isoleucine degradation
pfn00290  Valine, leucine and isoleucine biosynthesis
pfn00300  Lysine biosynthesis
pfn00310  Lysine degradation
pfn00330  Arginine and proline metabolism
pfn00332  Carbapenem biosynthesis
pfn00340  Histidine metabolism
pfn00350  Tyrosine metabolism
pfn00360  Phenylalanine metabolism
pfn00361  Chlorocyclohexane and chlorobenzene degradation
pfn00362  Benzoate degradation
pfn00364  Fluorobenzoate degradation
pfn00380  Tryptophan metabolism
pfn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pfn00401  Novobiocin biosynthesis
pfn00410  beta-Alanine metabolism
pfn00430  Taurine and hypotaurine metabolism
pfn00440  Phosphonate and phosphinate metabolism
pfn00450  Selenocompound metabolism
pfn00460  Cyanoamino acid metabolism
pfn00470  D-Amino acid metabolism
pfn00480  Glutathione metabolism
pfn00500  Starch and sucrose metabolism
pfn00520  Amino sugar and nucleotide sugar metabolism
pfn00521  Streptomycin biosynthesis
pfn00523  Polyketide sugar unit biosynthesis
pfn00525  Acarbose and validamycin biosynthesis
pfn00540  Lipopolysaccharide biosynthesis
pfn00541  O-Antigen nucleotide sugar biosynthesis
pfn00543  Exopolysaccharide biosynthesis
pfn00550  Peptidoglycan biosynthesis
pfn00552  Teichoic acid biosynthesis
pfn00561  Glycerolipid metabolism
pfn00562  Inositol phosphate metabolism
pfn00564  Glycerophospholipid metabolism
pfn00565  Ether lipid metabolism
pfn00592  alpha-Linolenic acid metabolism
pfn00620  Pyruvate metabolism
pfn00621  Dioxin degradation
pfn00622  Xylene degradation
pfn00623  Toluene degradation
pfn00624  Polycyclic aromatic hydrocarbon degradation
pfn00625  Chloroalkane and chloroalkene degradation
pfn00626  Naphthalene degradation
pfn00627  Aminobenzoate degradation
pfn00630  Glyoxylate and dicarboxylate metabolism
pfn00633  Nitrotoluene degradation
pfn00640  Propanoate metabolism
pfn00643  Styrene degradation
pfn00650  Butanoate metabolism
pfn00660  C5-Branched dibasic acid metabolism
pfn00670  One carbon pool by folate
pfn00680  Methane metabolism
pfn00710  Carbon fixation by Calvin cycle
pfn00720  Other carbon fixation pathways
pfn00730  Thiamine metabolism
pfn00740  Riboflavin metabolism
pfn00750  Vitamin B6 metabolism
pfn00760  Nicotinate and nicotinamide metabolism
pfn00770  Pantothenate and CoA biosynthesis
pfn00780  Biotin metabolism
pfn00785  Lipoic acid metabolism
pfn00790  Folate biosynthesis
pfn00791  Atrazine degradation
pfn00860  Porphyrin metabolism
pfn00900  Terpenoid backbone biosynthesis
pfn00907  Pinene, camphor and geraniol degradation
pfn00910  Nitrogen metabolism
pfn00920  Sulfur metabolism
pfn00930  Caprolactam degradation
pfn00946  Degradation of flavonoids
pfn00999  Biosynthesis of various plant secondary metabolites
pfn01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system