PATHWAY: pfq01100 Help Entry pfq01100                    Pathway                                 Name Metabolic pathways - Pragia fontium Class BRITE hierarchy Pathway map pfq01100   Metabolic pathways Module pfq_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pfq01100] pfq_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfq01100] pfq_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfq01100] pfq_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pfq01100] pfq_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfq01100] pfq_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfq01100] pfq_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfq01100] pfq_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfq01100] pfq_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfq01100] pfq_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfq01100] pfq_M00015   Proline biosynthesis, glutamate => proline [PATH:pfq01100] pfq_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfq01100] pfq_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pfq01100] pfq_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfq01100] pfq_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pfq01100] pfq_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pfq01100] pfq_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pfq01100] pfq_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfq01100] pfq_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pfq01100] pfq_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pfq01100] pfq_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pfq01100] pfq_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pfq01100] pfq_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pfq01100] pfq_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfq01100] pfq_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfq01100] pfq_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfq01100] pfq_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfq01100] pfq_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfq01100] pfq_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfq01100] pfq_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pfq01100] pfq_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pfq01100] pfq_M00063   CMP-KDO biosynthesis [PATH:pfq01100] pfq_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pfq01100] pfq_M00082   Fatty acid biosynthesis, initiation [PATH:pfq01100] pfq_M00083   Fatty acid biosynthesis, elongation [PATH:pfq01100] pfq_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pfq01100] pfq_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfq01100] pfq_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pfq01100] pfq_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfq01100] pfq_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pfq01100] pfq_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pfq01100] pfq_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfq01100] pfq_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfq01100] pfq_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfq01100] pfq_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfq01100] pfq_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfq01100] pfq_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pfq01100] pfq_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pfq01100] pfq_M00140   C1-unit interconversion, prokaryotes [PATH:pfq01100] pfq_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pfq01100] pfq_M00150   Fumarate reductase, prokaryotes [PATH:pfq01100] pfq_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pfq01100] pfq_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pfq01100] pfq_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pfq01100] pfq_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfq01100] pfq_M00417   Cytochrome o ubiquinol oxidase [PATH:pfq01100] pfq_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfq01100] pfq_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:pfq01100] pfq_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pfq01100] pfq_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pfq01100] pfq_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pfq01100] pfq_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pfq01100] pfq_M00621   Glycine cleavage system [PATH:pfq01100] pfq_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pfq01100] pfq_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pfq01100] pfq_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pfq01100] pfq_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:pfq01100] pfq_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfq01100] pfq_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfq01100] pfq_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:pfq01100] pfq_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pfq01100] pfq_M00970   Proline degradation, proline => glutamate [PATH:pfq01100] Organism Pragia fontium [GN:pfq] Related pathway pfq00010   Glycolysis / Gluconeogenesis pfq00020   Citrate cycle (TCA cycle) pfq00030   Pentose phosphate pathway pfq00040   Pentose and glucuronate interconversions pfq00051   Fructose and mannose metabolism pfq00052   Galactose metabolism pfq00053   Ascorbate and aldarate metabolism pfq00061   Fatty acid biosynthesis pfq00071   Fatty acid degradation pfq00130   Ubiquinone and other terpenoid-quinone biosynthesis pfq00190   Oxidative phosphorylation pfq00220   Arginine biosynthesis pfq00230   Purine metabolism pfq00240   Pyrimidine metabolism pfq00250   Alanine, aspartate and glutamate metabolism pfq00260   Glycine, serine and threonine metabolism pfq00261   Monobactam biosynthesis pfq00270   Cysteine and methionine metabolism pfq00280   Valine, leucine and isoleucine degradation pfq00290   Valine, leucine and isoleucine biosynthesis pfq00300   Lysine biosynthesis pfq00310   Lysine degradation pfq00330   Arginine and proline metabolism pfq00332   Carbapenem biosynthesis pfq00340   Histidine metabolism pfq00350   Tyrosine metabolism pfq00360   Phenylalanine metabolism pfq00362   Benzoate degradation pfq00380   Tryptophan metabolism pfq00400   Phenylalanine, tyrosine and tryptophan biosynthesis pfq00401   Novobiocin biosynthesis pfq00410   beta-Alanine metabolism pfq00430   Taurine and hypotaurine metabolism pfq00450   Selenocompound metabolism pfq00460   Cyanoamino acid metabolism pfq00470   D-Amino acid metabolism pfq00480   Glutathione metabolism pfq00500   Starch and sucrose metabolism pfq00511   Other glycan degradation pfq00520   Amino sugar and nucleotide sugar metabolism pfq00521   Streptomycin biosynthesis pfq00523   Polyketide sugar unit biosynthesis pfq00525   Acarbose and validamycin biosynthesis pfq00540   Lipopolysaccharide biosynthesis pfq00541   O-Antigen nucleotide sugar biosynthesis pfq00542   O-Antigen repeat unit biosynthesis pfq00543   Exopolysaccharide biosynthesis pfq00550   Peptidoglycan biosynthesis pfq00552   Teichoic acid biosynthesis pfq00561   Glycerolipid metabolism pfq00562   Inositol phosphate metabolism pfq00564   Glycerophospholipid metabolism pfq00600   Sphingolipid metabolism pfq00620   Pyruvate metabolism pfq00625   Chloroalkane and chloroalkene degradation pfq00626   Naphthalene degradation pfq00627   Aminobenzoate degradation pfq00630   Glyoxylate and dicarboxylate metabolism pfq00633   Nitrotoluene degradation pfq00640   Propanoate metabolism pfq00643   Styrene degradation pfq00650   Butanoate metabolism pfq00660   C5-Branched dibasic acid metabolism pfq00670   One carbon pool by folate pfq00680   Methane metabolism pfq00710   Carbon fixation by Calvin cycle pfq00720   Other carbon fixation pathways pfq00730   Thiamine metabolism pfq00740   Riboflavin metabolism pfq00750   Vitamin B6 metabolism pfq00760   Nicotinate and nicotinamide metabolism pfq00770   Pantothenate and CoA biosynthesis pfq00780   Biotin metabolism pfq00785   Lipoic acid metabolism pfq00790   Folate biosynthesis pfq00860   Porphyrin metabolism pfq00900   Terpenoid backbone biosynthesis pfq00910   Nitrogen metabolism pfq00920   Sulfur metabolism pfq00946   Degradation of flavonoids pfq00999   Biosynthesis of various plant secondary metabolites pfq01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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