KEGG   PATHWAY: pgb01100
Entry
pgb01100                    Pathway                                
Name
Metabolic pathways - Photobacterium gaetbulicola
Class
Pathway map
pgb01100  Metabolic pathways
pgb01100

Module
pgb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pgb01100]
pgb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pgb01100]
pgb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pgb01100]
pgb_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pgb01100]
pgb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pgb01100]
pgb_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pgb01100]
pgb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pgb01100]
pgb_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pgb01100]
pgb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pgb01100]
pgb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pgb01100]
pgb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pgb01100]
pgb_M00012  Glyoxylate cycle [PATH:pgb01100]
pgb_M00015  Proline biosynthesis, glutamate => proline [PATH:pgb01100]
pgb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pgb01100]
pgb_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pgb01100]
pgb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pgb01100]
pgb_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pgb01100]
pgb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pgb01100]
pgb_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pgb01100]
pgb_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pgb01100]
pgb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pgb01100]
pgb_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pgb01100]
pgb_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pgb01100]
pgb_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pgb01100]
pgb_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pgb01100]
pgb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pgb01100]
pgb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pgb01100]
pgb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pgb01100]
pgb_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pgb01100]
pgb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pgb01100]
pgb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pgb01100]
pgb_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pgb01100]
pgb_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pgb01100]
pgb_M00063  CMP-KDO biosynthesis [PATH:pgb01100]
pgb_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pgb01100]
pgb_M00082  Fatty acid biosynthesis, initiation [PATH:pgb01100]
pgb_M00083  Fatty acid biosynthesis, elongation [PATH:pgb01100]
pgb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pgb01100]
pgb_M00087  beta-Oxidation [PATH:pgb01100]
pgb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pgb01100]
pgb_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pgb01100]
pgb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pgb01100]
pgb_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pgb01100]
pgb_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pgb01100]
pgb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pgb01100]
pgb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pgb01100]
pgb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pgb01100]
pgb_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pgb01100]
pgb_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pgb01100]
pgb_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pgb01100]
pgb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pgb01100]
pgb_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pgb01100]
pgb_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pgb01100]
pgb_M00140  C1-unit interconversion, prokaryotes [PATH:pgb01100]
pgb_M00149  Succinate dehydrogenase, prokaryotes [PATH:pgb01100]
pgb_M00150  Fumarate reductase, prokaryotes [PATH:pgb01100]
pgb_M00151  Cytochrome bc1 complex respiratory unit [PATH:pgb01100]
pgb_M00155  Cytochrome c oxidase, prokaryotes [PATH:pgb01100]
pgb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pgb01100]
pgb_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pgb01100]
pgb_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pgb01100]
pgb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pgb01100]
pgb_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pgb01100]
pgb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pgb01100]
pgb_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pgb01100]
pgb_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pgb01100]
pgb_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pgb01100]
pgb_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pgb01100]
pgb_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pgb01100]
pgb_M00621  Glycine cleavage system [PATH:pgb01100]
pgb_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pgb01100]
pgb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pgb01100]
pgb_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pgb01100]
pgb_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pgb01100]
pgb_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:pgb01100]
pgb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pgb01100]
pgb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pgb01100]
pgb_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pgb01100]
pgb_M00922  CMP-Neu5Ac biosynthesis [PATH:pgb01100]
pgb_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pgb01100]
pgb_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pgb01100]
pgb_M00970  Proline degradation, proline => glutamate [PATH:pgb01100]
Organism
Photobacterium gaetbulicola [GN:pgb]
Related
pathway
pgb00010  Glycolysis / Gluconeogenesis
pgb00020  Citrate cycle (TCA cycle)
pgb00030  Pentose phosphate pathway
pgb00040  Pentose and glucuronate interconversions
pgb00051  Fructose and mannose metabolism
pgb00052  Galactose metabolism
pgb00053  Ascorbate and aldarate metabolism
pgb00061  Fatty acid biosynthesis
pgb00071  Fatty acid degradation
pgb00130  Ubiquinone and other terpenoid-quinone biosynthesis
pgb00190  Oxidative phosphorylation
pgb00220  Arginine biosynthesis
pgb00230  Purine metabolism
pgb00240  Pyrimidine metabolism
pgb00250  Alanine, aspartate and glutamate metabolism
pgb00260  Glycine, serine and threonine metabolism
pgb00261  Monobactam biosynthesis
pgb00270  Cysteine and methionine metabolism
pgb00280  Valine, leucine and isoleucine degradation
pgb00290  Valine, leucine and isoleucine biosynthesis
pgb00300  Lysine biosynthesis
pgb00310  Lysine degradation
pgb00330  Arginine and proline metabolism
pgb00332  Carbapenem biosynthesis
pgb00340  Histidine metabolism
pgb00350  Tyrosine metabolism
pgb00360  Phenylalanine metabolism
pgb00362  Benzoate degradation
pgb00380  Tryptophan metabolism
pgb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pgb00401  Novobiocin biosynthesis
pgb00410  beta-Alanine metabolism
pgb00430  Taurine and hypotaurine metabolism
pgb00440  Phosphonate and phosphinate metabolism
pgb00450  Selenocompound metabolism
pgb00460  Cyanoamino acid metabolism
pgb00470  D-Amino acid metabolism
pgb00480  Glutathione metabolism
pgb00500  Starch and sucrose metabolism
pgb00511  Other glycan degradation
pgb00520  Amino sugar and nucleotide sugar metabolism
pgb00521  Streptomycin biosynthesis
pgb00540  Lipopolysaccharide biosynthesis
pgb00541  O-Antigen nucleotide sugar biosynthesis
pgb00542  O-Antigen repeat unit biosynthesis
pgb00543  Exopolysaccharide biosynthesis
pgb00550  Peptidoglycan biosynthesis
pgb00552  Teichoic acid biosynthesis
pgb00561  Glycerolipid metabolism
pgb00562  Inositol phosphate metabolism
pgb00564  Glycerophospholipid metabolism
pgb00592  alpha-Linolenic acid metabolism
pgb00600  Sphingolipid metabolism
pgb00620  Pyruvate metabolism
pgb00625  Chloroalkane and chloroalkene degradation
pgb00626  Naphthalene degradation
pgb00627  Aminobenzoate degradation
pgb00630  Glyoxylate and dicarboxylate metabolism
pgb00633  Nitrotoluene degradation
pgb00640  Propanoate metabolism
pgb00643  Styrene degradation
pgb00650  Butanoate metabolism
pgb00660  C5-Branched dibasic acid metabolism
pgb00670  One carbon pool by folate
pgb00680  Methane metabolism
pgb00730  Thiamine metabolism
pgb00740  Riboflavin metabolism
pgb00750  Vitamin B6 metabolism
pgb00760  Nicotinate and nicotinamide metabolism
pgb00770  Pantothenate and CoA biosynthesis
pgb00780  Biotin metabolism
pgb00785  Lipoic acid metabolism
pgb00790  Folate biosynthesis
pgb00860  Porphyrin metabolism
pgb00900  Terpenoid backbone biosynthesis
pgb00903  Limonene degradation
pgb00907  Pinene, camphor and geraniol degradation
pgb00910  Nitrogen metabolism
pgb00920  Sulfur metabolism
pgb00930  Caprolactam degradation
pgb00946  Degradation of flavonoids
pgb00999  Biosynthesis of various plant secondary metabolites
pgb01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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