KEGG   PATHWAY: pgp01100
Entry
pgp01100                    Pathway                                
Name
Metabolic pathways - Paraburkholderia graminis
Class
Pathway map
pgp01100  Metabolic pathways
pgp01100

Module
pgp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pgp01100]
pgp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pgp01100]
pgp_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pgp01100]
pgp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pgp01100]
pgp_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pgp01100]
pgp_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pgp01100]
pgp_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pgp01100]
pgp_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pgp01100]
pgp_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pgp01100]
pgp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pgp01100]
pgp_M00012  Glyoxylate cycle [PATH:pgp01100]
pgp_M00015  Proline biosynthesis, glutamate => proline [PATH:pgp01100]
pgp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pgp01100]
pgp_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pgp01100]
pgp_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pgp01100]
pgp_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pgp01100]
pgp_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pgp01100]
pgp_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pgp01100]
pgp_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:pgp01100]
pgp_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pgp01100]
pgp_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pgp01100]
pgp_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pgp01100]
pgp_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pgp01100]
pgp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pgp01100]
pgp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pgp01100]
pgp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pgp01100]
pgp_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pgp01100]
pgp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pgp01100]
pgp_M00063  CMP-KDO biosynthesis [PATH:pgp01100]
pgp_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pgp01100]
pgp_M00082  Fatty acid biosynthesis, initiation [PATH:pgp01100]
pgp_M00083  Fatty acid biosynthesis, elongation [PATH:pgp01100]
pgp_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pgp01100]
pgp_M00087  beta-Oxidation [PATH:pgp01100]
pgp_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pgp01100]
pgp_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pgp01100]
pgp_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pgp01100]
pgp_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pgp01100]
pgp_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pgp01100]
pgp_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pgp01100]
pgp_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pgp01100]
pgp_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pgp01100]
pgp_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pgp01100]
pgp_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pgp01100]
pgp_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pgp01100]
pgp_M00149  Succinate dehydrogenase, prokaryotes [PATH:pgp01100]
pgp_M00151  Cytochrome bc1 complex respiratory unit [PATH:pgp01100]
pgp_M00155  Cytochrome c oxidase, prokaryotes [PATH:pgp01100]
pgp_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pgp01100]
pgp_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:pgp01100]
pgp_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pgp01100]
pgp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pgp01100]
pgp_M00417  Cytochrome o ubiquinol oxidase [PATH:pgp01100]
pgp_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pgp01100]
pgp_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pgp01100]
pgp_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pgp01100]
pgp_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pgp01100]
pgp_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pgp01100]
pgp_M00555  Betaine biosynthesis, choline => betaine [PATH:pgp01100]
pgp_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pgp01100]
pgp_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pgp01100]
pgp_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pgp01100]
pgp_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pgp01100]
pgp_M00621  Glycine cleavage system [PATH:pgp01100]
pgp_M00793  dTDP-L-rhamnose biosynthesis [PATH:pgp01100]
pgp_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pgp01100]
pgp_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pgp01100]
pgp_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pgp01100]
pgp_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pgp01100]
pgp_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pgp01100]
pgp_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pgp01100]
pgp_M00919  Ectoine degradation, ectoine => aspartate [PATH:pgp01100]
pgp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pgp01100]
pgp_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pgp01100]
pgp_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pgp01100]
pgp_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pgp01100]
pgp_M00970  Proline degradation, proline => glutamate [PATH:pgp01100]
pgp_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pgp01100]
Organism
Paraburkholderia graminis [GN:pgp]
Related
pathway
pgp00010  Glycolysis / Gluconeogenesis
pgp00020  Citrate cycle (TCA cycle)
pgp00030  Pentose phosphate pathway
pgp00040  Pentose and glucuronate interconversions
pgp00051  Fructose and mannose metabolism
pgp00052  Galactose metabolism
pgp00053  Ascorbate and aldarate metabolism
pgp00061  Fatty acid biosynthesis
pgp00071  Fatty acid degradation
pgp00074  Mycolic acid biosynthesis
pgp00100  Steroid biosynthesis
pgp00130  Ubiquinone and other terpenoid-quinone biosynthesis
pgp00190  Oxidative phosphorylation
pgp00220  Arginine biosynthesis
pgp00230  Purine metabolism
pgp00240  Pyrimidine metabolism
pgp00250  Alanine, aspartate and glutamate metabolism
pgp00260  Glycine, serine and threonine metabolism
pgp00261  Monobactam biosynthesis
pgp00270  Cysteine and methionine metabolism
pgp00280  Valine, leucine and isoleucine degradation
pgp00290  Valine, leucine and isoleucine biosynthesis
pgp00300  Lysine biosynthesis
pgp00310  Lysine degradation
pgp00330  Arginine and proline metabolism
pgp00332  Carbapenem biosynthesis
pgp00340  Histidine metabolism
pgp00350  Tyrosine metabolism
pgp00360  Phenylalanine metabolism
pgp00361  Chlorocyclohexane and chlorobenzene degradation
pgp00362  Benzoate degradation
pgp00364  Fluorobenzoate degradation
pgp00365  Furfural degradation
pgp00380  Tryptophan metabolism
pgp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pgp00401  Novobiocin biosynthesis
pgp00410  beta-Alanine metabolism
pgp00430  Taurine and hypotaurine metabolism
pgp00440  Phosphonate and phosphinate metabolism
pgp00450  Selenocompound metabolism
pgp00460  Cyanoamino acid metabolism
pgp00470  D-Amino acid metabolism
pgp00480  Glutathione metabolism
pgp00500  Starch and sucrose metabolism
pgp00520  Amino sugar and nucleotide sugar metabolism
pgp00521  Streptomycin biosynthesis
pgp00523  Polyketide sugar unit biosynthesis
pgp00525  Acarbose and validamycin biosynthesis
pgp00540  Lipopolysaccharide biosynthesis
pgp00541  O-Antigen nucleotide sugar biosynthesis
pgp00543  Exopolysaccharide biosynthesis
pgp00550  Peptidoglycan biosynthesis
pgp00552  Teichoic acid biosynthesis
pgp00561  Glycerolipid metabolism
pgp00562  Inositol phosphate metabolism
pgp00564  Glycerophospholipid metabolism
pgp00565  Ether lipid metabolism
pgp00572  Arabinogalactan biosynthesis - Mycobacterium
pgp00592  alpha-Linolenic acid metabolism
pgp00600  Sphingolipid metabolism
pgp00620  Pyruvate metabolism
pgp00621  Dioxin degradation
pgp00622  Xylene degradation
pgp00623  Toluene degradation
pgp00624  Polycyclic aromatic hydrocarbon degradation
pgp00625  Chloroalkane and chloroalkene degradation
pgp00626  Naphthalene degradation
pgp00627  Aminobenzoate degradation
pgp00630  Glyoxylate and dicarboxylate metabolism
pgp00633  Nitrotoluene degradation
pgp00640  Propanoate metabolism
pgp00643  Styrene degradation
pgp00650  Butanoate metabolism
pgp00660  C5-Branched dibasic acid metabolism
pgp00670  One carbon pool by folate
pgp00680  Methane metabolism
pgp00710  Carbon fixation by Calvin cycle
pgp00720  Other carbon fixation pathways
pgp00730  Thiamine metabolism
pgp00740  Riboflavin metabolism
pgp00750  Vitamin B6 metabolism
pgp00760  Nicotinate and nicotinamide metabolism
pgp00770  Pantothenate and CoA biosynthesis
pgp00780  Biotin metabolism
pgp00785  Lipoic acid metabolism
pgp00790  Folate biosynthesis
pgp00791  Atrazine degradation
pgp00860  Porphyrin metabolism
pgp00900  Terpenoid backbone biosynthesis
pgp00903  Limonene degradation
pgp00906  Carotenoid biosynthesis
pgp00907  Pinene, camphor and geraniol degradation
pgp00909  Sesquiterpenoid and triterpenoid biosynthesis
pgp00910  Nitrogen metabolism
pgp00920  Sulfur metabolism
pgp00930  Caprolactam degradation
pgp00946  Degradation of flavonoids
pgp00996  Biosynthesis of various alkaloids
pgp00998  Biosynthesis of various antibiotics
pgp00999  Biosynthesis of various plant secondary metabolites
pgp01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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