PATHWAY: phq01100 Help Entry phq01100          Global    Pathway                                 Name Metabolic pathways - Phaeobacter sp. LSS9 Class BRITE hierarchy Pathway map phq01100   Metabolic pathways Module phq_M00002   Glycolysis, core module involving three-carbon compounds [PATH:phq01100] phq_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:phq01100] phq_M00005   PRPP biosynthesis, ribose-5P => PRPP [PATH:phq01100] phq_M00007   Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:phq01100] phq_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:phq01100] phq_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:phq01100] phq_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:phq01100] phq_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:phq01100] phq_M00015   Proline biosynthesis, glutamate => proline [PATH:phq01100] phq_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:phq01100] phq_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:phq01100] phq_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:phq01100] phq_M00021   Cysteine biosynthesis, serine => cysteine [PATH:phq01100] phq_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:phq01100] phq_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:phq01100] phq_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:phq01100] phq_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:phq01100] phq_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:phq01100] phq_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:phq01100] phq_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:phq01100] phq_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:phq01100] phq_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:phq01100] phq_M00082   Fatty acid biosynthesis, initiation [PATH:phq01100] phq_M00083   Fatty acid biosynthesis, elongation [PATH:phq01100] phq_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:phq01100] phq_M00087   beta-Oxidation [PATH:phq01100] phq_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:phq01100] phq_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:phq01100] phq_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:phq01100] phq_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:phq01100] phq_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:phq01100] phq_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:phq01100] phq_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:phq01100] phq_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:phq01100] phq_M00140   C1-unit interconversion, prokaryotes [PATH:phq01100] phq_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:phq01100] phq_M00149   Succinate dehydrogenase, prokaryotes [PATH:phq01100] phq_M00151   Cytochrome bc1 complex respiratory unit [PATH:phq01100] phq_M00155   Cytochrome c oxidase, prokaryotes [PATH:phq01100] phq_M00156   Cytochrome c oxidase, cbb3-type [PATH:phq01100] phq_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:phq01100] phq_M00169   CAM (Crassulacean acid metabolism), light [PATH:phq01100] phq_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:phq01100] phq_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:phq01100] phq_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:phq01100] phq_M00549   UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:phq01100] phq_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:phq01100] phq_M00555   Betaine biosynthesis, choline => betaine [PATH:phq01100] phq_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:phq01100] phq_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:phq01100] phq_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:phq01100] phq_M00595   Sulfur oxidation, SOX system, thiosulfate => sulfate [PATH:phq01100] phq_M00621   Glycine cleavage system [PATH:phq01100] phq_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:phq01100] phq_M00793   dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha [PATH:phq01100] phq_M00844   Arginine biosynthesis, ornithine => arginine [PATH:phq01100] phq_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:phq01100] phq_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:phq01100] phq_M00909   UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:phq01100] phq_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:phq01100] phq_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:phq01100] phq_M00970   Proline degradation, proline => glutamate [PATH:phq01100] phq_M00988   PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:phq01100] phq_M00995   UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:phq01100] phq_M00999   UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:phq01100] phq_M01000   GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:phq01100] phq_M01004   UDP-Galf biosynthesis, UDP-Glc => UDP-Galf [PATH:phq01100] phq_M01016   GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH:phq01100] Organism Phaeobacter sp. LSS9 [GN:phq] Related pathway phq00010   Glycolysis / Gluconeogenesis phq00020   Citrate cycle (TCA cycle) phq00030   Pentose phosphate pathway phq00040   Pentose and glucuronate interconversions phq00051   Fructose and mannose metabolism phq00052   Galactose metabolism phq00053   Ascorbate and aldarate metabolism phq00061   Fatty acid biosynthesis phq00071   Fatty acid degradation phq00074   Mycolic acid biosynthesis phq00100   Steroid biosynthesis phq00121   Secondary bile acid biosynthesis phq00130   Ubiquinone and other terpenoid-quinone biosynthesis phq00190   Oxidative phosphorylation phq00220   Arginine biosynthesis phq00230   Purine metabolism phq00240   Pyrimidine metabolism phq00250   Alanine, aspartate and glutamate metabolism phq00260   Glycine, serine and threonine metabolism phq00261   Monobactam biosynthesis phq00270   Cysteine and methionine metabolism phq00280   Valine, leucine and isoleucine degradation phq00290   Valine, leucine and isoleucine biosynthesis phq00300   Lysine biosynthesis phq00310   Lysine degradation phq00330   Arginine and proline metabolism phq00332   Carbapenem biosynthesis phq00340   Histidine metabolism phq00350   Tyrosine metabolism phq00360   Phenylalanine metabolism phq00362   Benzoate degradation phq00380   Tryptophan metabolism phq00400   Phenylalanine, tyrosine and tryptophan biosynthesis phq00401   Novobiocin biosynthesis phq00405   Phenazine biosynthesis phq00410   beta-Alanine metabolism phq00430   Taurine and hypotaurine metabolism phq00440   Phosphonate and phosphinate metabolism phq00450   Selenocompound metabolism phq00460   Cyanoamino acid metabolism phq00470   D-Amino acid metabolism phq00480   Glutathione metabolism phq00500   Starch and sucrose metabolism phq00520   Amino sugar and nucleotide sugar metabolism phq00521   Streptomycin biosynthesis phq00523   Polyketide sugar unit biosynthesis phq00525   Acarbose and validamycin biosynthesis phq00540   Lipopolysaccharide biosynthesis phq00541   Biosynthesis of various nucleotide sugars phq00543   Exopolysaccharide biosynthesis phq00550   Peptidoglycan biosynthesis phq00552   Teichoic acid biosynthesis phq00561   Glycerolipid metabolism phq00562   Inositol phosphate metabolism phq00564   Glycerophospholipid metabolism phq00592   alpha-Linolenic acid metabolism phq00600   Sphingolipid metabolism phq00620   Pyruvate metabolism phq00625   Chloroalkane and chloroalkene degradation phq00626   Naphthalene degradation phq00627   Aminobenzoate degradation phq00630   Glyoxylate and dicarboxylate metabolism phq00640   Propanoate metabolism phq00643   Styrene degradation phq00650   Butanoate metabolism phq00660   C5-Branched dibasic acid metabolism phq00670   One carbon pool by folate phq00680   Methane metabolism phq00710   Carbon fixation by Calvin cycle phq00720   Other carbon fixation pathways phq00730   Thiamine metabolism phq00740   Riboflavin metabolism phq00750   Vitamin B6 metabolism phq00760   Nicotinate and nicotinamide metabolism phq00770   Pantothenate and CoA biosynthesis phq00780   Biotin metabolism phq00785   Lipoic acid metabolism phq00790   Folate biosynthesis phq00860   Porphyrin metabolism phq00900   Terpenoid backbone biosynthesis phq00906   Carotenoid biosynthesis phq00907   Pinene, camphor and geraniol degradation phq00910   Nitrogen metabolism phq00920   Sulfur metabolism phq00930   Caprolactam degradation phq00946   Degradation of flavonoids phq00984   Steroid degradation phq00999   Biosynthesis of various plant secondary metabolites phq01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100

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