KEGG   PATHWAY: pkd01100
Entry
pkd01100                    Pathway                                
Name
Metabolic pathways - Paracoccus kondratievae
Class
Pathway map
pkd01100  Metabolic pathways
pkd01100

Module
pkd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pkd01100]
pkd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pkd01100]
pkd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pkd01100]
pkd_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pkd01100]
pkd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pkd01100]
pkd_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pkd01100]
pkd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pkd01100]
pkd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pkd01100]
pkd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pkd01100]
pkd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pkd01100]
pkd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pkd01100]
pkd_M00015  Proline biosynthesis, glutamate => proline [PATH:pkd01100]
pkd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pkd01100]
pkd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pkd01100]
pkd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pkd01100]
pkd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pkd01100]
pkd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pkd01100]
pkd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pkd01100]
pkd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pkd01100]
pkd_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pkd01100]
pkd_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pkd01100]
pkd_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pkd01100]
pkd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pkd01100]
pkd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pkd01100]
pkd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pkd01100]
pkd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pkd01100]
pkd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pkd01100]
pkd_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pkd01100]
pkd_M00082  Fatty acid biosynthesis, initiation [PATH:pkd01100]
pkd_M00083  Fatty acid biosynthesis, elongation [PATH:pkd01100]
pkd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pkd01100]
pkd_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:pkd01100]
pkd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pkd01100]
pkd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pkd01100]
pkd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pkd01100]
pkd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pkd01100]
pkd_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pkd01100]
pkd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pkd01100]
pkd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pkd01100]
pkd_M00140  C1-unit interconversion, prokaryotes [PATH:pkd01100]
pkd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pkd01100]
pkd_M00149  Succinate dehydrogenase, prokaryotes [PATH:pkd01100]
pkd_M00151  Cytochrome bc1 complex respiratory unit [PATH:pkd01100]
pkd_M00155  Cytochrome c oxidase, prokaryotes [PATH:pkd01100]
pkd_M00156  Cytochrome c oxidase, cbb3-type [PATH:pkd01100]
pkd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pkd01100]
pkd_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:pkd01100]
pkd_M00169  CAM (Crassulacean acid metabolism), light [PATH:pkd01100]
pkd_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pkd01100]
pkd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pkd01100]
pkd_M00373  Ethylmalonyl pathway [PATH:pkd01100]
pkd_M00417  Cytochrome o ubiquinol oxidase [PATH:pkd01100]
pkd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pkd01100]
pkd_M00529  Denitrification, nitrate => nitrogen [PATH:pkd01100]
pkd_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pkd01100]
pkd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pkd01100]
pkd_M00555  Betaine biosynthesis, choline => betaine [PATH:pkd01100]
pkd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pkd01100]
pkd_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pkd01100]
pkd_M00621  Glycine cleavage system [PATH:pkd01100]
pkd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pkd01100]
pkd_M00793  dTDP-L-rhamnose biosynthesis [PATH:pkd01100]
pkd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pkd01100]
pkd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pkd01100]
pkd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pkd01100]
pkd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pkd01100]
pkd_M00919  Ectoine degradation, ectoine => aspartate [PATH:pkd01100]
pkd_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pkd01100]
pkd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pkd01100]
pkd_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pkd01100]
pkd_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pkd01100]
pkd_M00970  Proline degradation, proline => glutamate [PATH:pkd01100]
Organism
Paracoccus kondratievae [GN:pkd]
Related
pathway
pkd00010  Glycolysis / Gluconeogenesis
pkd00020  Citrate cycle (TCA cycle)
pkd00030  Pentose phosphate pathway
pkd00040  Pentose and glucuronate interconversions
pkd00051  Fructose and mannose metabolism
pkd00052  Galactose metabolism
pkd00053  Ascorbate and aldarate metabolism
pkd00061  Fatty acid biosynthesis
pkd00071  Fatty acid degradation
pkd00121  Secondary bile acid biosynthesis
pkd00130  Ubiquinone and other terpenoid-quinone biosynthesis
pkd00190  Oxidative phosphorylation
pkd00220  Arginine biosynthesis
pkd00230  Purine metabolism
pkd00240  Pyrimidine metabolism
pkd00250  Alanine, aspartate and glutamate metabolism
pkd00260  Glycine, serine and threonine metabolism
pkd00261  Monobactam biosynthesis
pkd00270  Cysteine and methionine metabolism
pkd00280  Valine, leucine and isoleucine degradation
pkd00290  Valine, leucine and isoleucine biosynthesis
pkd00300  Lysine biosynthesis
pkd00310  Lysine degradation
pkd00330  Arginine and proline metabolism
pkd00332  Carbapenem biosynthesis
pkd00340  Histidine metabolism
pkd00350  Tyrosine metabolism
pkd00360  Phenylalanine metabolism
pkd00361  Chlorocyclohexane and chlorobenzene degradation
pkd00362  Benzoate degradation
pkd00364  Fluorobenzoate degradation
pkd00380  Tryptophan metabolism
pkd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pkd00401  Novobiocin biosynthesis
pkd00410  beta-Alanine metabolism
pkd00430  Taurine and hypotaurine metabolism
pkd00440  Phosphonate and phosphinate metabolism
pkd00450  Selenocompound metabolism
pkd00460  Cyanoamino acid metabolism
pkd00470  D-Amino acid metabolism
pkd00480  Glutathione metabolism
pkd00500  Starch and sucrose metabolism
pkd00520  Amino sugar and nucleotide sugar metabolism
pkd00521  Streptomycin biosynthesis
pkd00523  Polyketide sugar unit biosynthesis
pkd00525  Acarbose and validamycin biosynthesis
pkd00540  Lipopolysaccharide biosynthesis
pkd00541  O-Antigen nucleotide sugar biosynthesis
pkd00543  Exopolysaccharide biosynthesis
pkd00550  Peptidoglycan biosynthesis
pkd00552  Teichoic acid biosynthesis
pkd00561  Glycerolipid metabolism
pkd00562  Inositol phosphate metabolism
pkd00564  Glycerophospholipid metabolism
pkd00620  Pyruvate metabolism
pkd00622  Xylene degradation
pkd00623  Toluene degradation
pkd00624  Polycyclic aromatic hydrocarbon degradation
pkd00625  Chloroalkane and chloroalkene degradation
pkd00626  Naphthalene degradation
pkd00627  Aminobenzoate degradation
pkd00630  Glyoxylate and dicarboxylate metabolism
pkd00633  Nitrotoluene degradation
pkd00640  Propanoate metabolism
pkd00642  Ethylbenzene degradation
pkd00643  Styrene degradation
pkd00650  Butanoate metabolism
pkd00660  C5-Branched dibasic acid metabolism
pkd00670  One carbon pool by folate
pkd00680  Methane metabolism
pkd00710  Carbon fixation in photosynthetic organisms
pkd00730  Thiamine metabolism
pkd00740  Riboflavin metabolism
pkd00750  Vitamin B6 metabolism
pkd00760  Nicotinate and nicotinamide metabolism
pkd00770  Pantothenate and CoA biosynthesis
pkd00780  Biotin metabolism
pkd00785  Lipoic acid metabolism
pkd00790  Folate biosynthesis
pkd00860  Porphyrin metabolism
pkd00900  Terpenoid backbone biosynthesis
pkd00906  Carotenoid biosynthesis
pkd00907  Pinene, camphor and geraniol degradation
pkd00910  Nitrogen metabolism
pkd00920  Sulfur metabolism
pkd00930  Caprolactam degradation
pkd00999  Biosynthesis of various plant secondary metabolites
pkd01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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