KEGG   PATHWAY: plyc01100
Entry
plyc01100                   Pathway                                
Name
Metabolic pathways - Paenibacillus lycopersici
Class
Pathway map
plyc01100  Metabolic pathways
plyc01100

Module
plyc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:plyc01100]
plyc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:plyc01100]
plyc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:plyc01100]
plyc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:plyc01100]
plyc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:plyc01100]
plyc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:plyc01100]
plyc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:plyc01100]
plyc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:plyc01100]
plyc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:plyc01100]
plyc_M00015  Proline biosynthesis, glutamate => proline [PATH:plyc01100]
plyc_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:plyc01100]
plyc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:plyc01100]
plyc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:plyc01100]
plyc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:plyc01100]
plyc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:plyc01100]
plyc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:plyc01100]
plyc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:plyc01100]
plyc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:plyc01100]
plyc_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:plyc01100]
plyc_M00034  Methionine salvage pathway [PATH:plyc01100]
plyc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:plyc01100]
plyc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:plyc01100]
plyc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:plyc01100]
plyc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:plyc01100]
plyc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:plyc01100]
plyc_M00082  Fatty acid biosynthesis, initiation [PATH:plyc01100]
plyc_M00083  Fatty acid biosynthesis, elongation [PATH:plyc01100]
plyc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:plyc01100]
plyc_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:plyc01100]
plyc_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:plyc01100]
plyc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:plyc01100]
plyc_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:plyc01100]
plyc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:plyc01100]
plyc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:plyc01100]
plyc_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:plyc01100]
plyc_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:plyc01100]
plyc_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:plyc01100]
plyc_M00151  Cytochrome bc1 complex respiratory unit [PATH:plyc01100]
plyc_M00155  Cytochrome c oxidase, prokaryotes [PATH:plyc01100]
plyc_M00168  CAM (Crassulacean acid metabolism), dark [PATH:plyc01100]
plyc_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:plyc01100]
plyc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plyc01100]
plyc_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:plyc01100]
plyc_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:plyc01100]
plyc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:plyc01100]
plyc_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:plyc01100]
plyc_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:plyc01100]
plyc_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:plyc01100]
plyc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:plyc01100]
plyc_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:plyc01100]
plyc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:plyc01100]
plyc_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:plyc01100]
plyc_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:plyc01100]
plyc_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:plyc01100]
plyc_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:plyc01100]
plyc_M00793  dTDP-L-rhamnose biosynthesis [PATH:plyc01100]
plyc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:plyc01100]
plyc_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:plyc01100]
plyc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:plyc01100]
plyc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:plyc01100]
plyc_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:plyc01100]
plyc_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:plyc01100]
plyc_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:plyc01100]
plyc_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:plyc01100]
plyc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:plyc01100]
plyc_M00970  Proline degradation, proline => glutamate [PATH:plyc01100]
plyc_M00972  Proline metabolism [PATH:plyc01100]
Organism
Paenibacillus lycopersici [GN:plyc]
Related
pathway
plyc00010  Glycolysis / Gluconeogenesis
plyc00020  Citrate cycle (TCA cycle)
plyc00030  Pentose phosphate pathway
plyc00040  Pentose and glucuronate interconversions
plyc00051  Fructose and mannose metabolism
plyc00052  Galactose metabolism
plyc00053  Ascorbate and aldarate metabolism
plyc00061  Fatty acid biosynthesis
plyc00071  Fatty acid degradation
plyc00130  Ubiquinone and other terpenoid-quinone biosynthesis
plyc00190  Oxidative phosphorylation
plyc00220  Arginine biosynthesis
plyc00230  Purine metabolism
plyc00240  Pyrimidine metabolism
plyc00250  Alanine, aspartate and glutamate metabolism
plyc00260  Glycine, serine and threonine metabolism
plyc00261  Monobactam biosynthesis
plyc00270  Cysteine and methionine metabolism
plyc00280  Valine, leucine and isoleucine degradation
plyc00290  Valine, leucine and isoleucine biosynthesis
plyc00300  Lysine biosynthesis
plyc00310  Lysine degradation
plyc00330  Arginine and proline metabolism
plyc00332  Carbapenem biosynthesis
plyc00340  Histidine metabolism
plyc00350  Tyrosine metabolism
plyc00360  Phenylalanine metabolism
plyc00361  Chlorocyclohexane and chlorobenzene degradation
plyc00362  Benzoate degradation
plyc00380  Tryptophan metabolism
plyc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
plyc00401  Novobiocin biosynthesis
plyc00410  beta-Alanine metabolism
plyc00430  Taurine and hypotaurine metabolism
plyc00440  Phosphonate and phosphinate metabolism
plyc00450  Selenocompound metabolism
plyc00460  Cyanoamino acid metabolism
plyc00470  D-Amino acid metabolism
plyc00480  Glutathione metabolism
plyc00500  Starch and sucrose metabolism
plyc00511  Other glycan degradation
plyc00520  Amino sugar and nucleotide sugar metabolism
plyc00521  Streptomycin biosynthesis
plyc00523  Polyketide sugar unit biosynthesis
plyc00525  Acarbose and validamycin biosynthesis
plyc00540  Lipopolysaccharide biosynthesis
plyc00541  O-Antigen nucleotide sugar biosynthesis
plyc00542  O-Antigen repeat unit biosynthesis
plyc00543  Exopolysaccharide biosynthesis
plyc00550  Peptidoglycan biosynthesis
plyc00552  Teichoic acid biosynthesis
plyc00561  Glycerolipid metabolism
plyc00562  Inositol phosphate metabolism
plyc00564  Glycerophospholipid metabolism
plyc00565  Ether lipid metabolism
plyc00592  alpha-Linolenic acid metabolism
plyc00600  Sphingolipid metabolism
plyc00620  Pyruvate metabolism
plyc00622  Xylene degradation
plyc00625  Chloroalkane and chloroalkene degradation
plyc00626  Naphthalene degradation
plyc00627  Aminobenzoate degradation
plyc00630  Glyoxylate and dicarboxylate metabolism
plyc00640  Propanoate metabolism
plyc00643  Styrene degradation
plyc00650  Butanoate metabolism
plyc00660  C5-Branched dibasic acid metabolism
plyc00670  One carbon pool by folate
plyc00680  Methane metabolism
plyc00710  Carbon fixation by Calvin cycle
plyc00720  Other carbon fixation pathways
plyc00730  Thiamine metabolism
plyc00740  Riboflavin metabolism
plyc00750  Vitamin B6 metabolism
plyc00760  Nicotinate and nicotinamide metabolism
plyc00770  Pantothenate and CoA biosynthesis
plyc00780  Biotin metabolism
plyc00785  Lipoic acid metabolism
plyc00790  Folate biosynthesis
plyc00860  Porphyrin metabolism
plyc00900  Terpenoid backbone biosynthesis
plyc00903  Limonene degradation
plyc00907  Pinene, camphor and geraniol degradation
plyc00910  Nitrogen metabolism
plyc00920  Sulfur metabolism
plyc00946  Degradation of flavonoids
plyc00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
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