KEGG   PATHWAY: pmed01100
Entry
pmed01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas mediterranea
Class
Pathway map
pmed01100  Metabolic pathways
pmed01100

Module
pmed_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pmed01100]
pmed_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pmed01100]
pmed_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pmed01100]
pmed_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pmed01100]
pmed_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pmed01100]
pmed_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pmed01100]
pmed_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pmed01100]
pmed_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pmed01100]
pmed_M00015  Proline biosynthesis, glutamate => proline [PATH:pmed01100]
pmed_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pmed01100]
pmed_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pmed01100]
pmed_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pmed01100]
pmed_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pmed01100]
pmed_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pmed01100]
pmed_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pmed01100]
pmed_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pmed01100]
pmed_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pmed01100]
pmed_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pmed01100]
pmed_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pmed01100]
pmed_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pmed01100]
pmed_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pmed01100]
pmed_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pmed01100]
pmed_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pmed01100]
pmed_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pmed01100]
pmed_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pmed01100]
pmed_M00082  Fatty acid biosynthesis, initiation [PATH:pmed01100]
pmed_M00083  Fatty acid biosynthesis, elongation [PATH:pmed01100]
pmed_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pmed01100]
pmed_M00087  beta-Oxidation [PATH:pmed01100]
pmed_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pmed01100]
pmed_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pmed01100]
pmed_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pmed01100]
pmed_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pmed01100]
pmed_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pmed01100]
pmed_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pmed01100]
pmed_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pmed01100]
pmed_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pmed01100]
pmed_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pmed01100]
pmed_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pmed01100]
pmed_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pmed01100]
pmed_M00149  Succinate dehydrogenase, prokaryotes [PATH:pmed01100]
pmed_M00151  Cytochrome bc1 complex respiratory unit [PATH:pmed01100]
pmed_M00156  Cytochrome c oxidase, cbb3-type [PATH:pmed01100]
pmed_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pmed01100]
pmed_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pmed01100]
pmed_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmed01100]
pmed_M00417  Cytochrome o ubiquinol oxidase [PATH:pmed01100]
pmed_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pmed01100]
pmed_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pmed01100]
pmed_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pmed01100]
pmed_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pmed01100]
pmed_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pmed01100]
pmed_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pmed01100]
pmed_M00555  Betaine biosynthesis, choline => betaine [PATH:pmed01100]
pmed_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pmed01100]
pmed_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pmed01100]
pmed_M00621  Glycine cleavage system [PATH:pmed01100]
pmed_M00793  dTDP-L-rhamnose biosynthesis [PATH:pmed01100]
pmed_M00811  Nicotine degradation, pyrrolidine pathway, nicotine => succinate semialdehyde [PATH:pmed01100]
pmed_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pmed01100]
pmed_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pmed01100]
pmed_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pmed01100]
pmed_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pmed01100]
pmed_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pmed01100]
pmed_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pmed01100]
pmed_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pmed01100]
pmed_M00970  Proline degradation, proline => glutamate [PATH:pmed01100]
pmed_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pmed01100]
Organism
Pseudomonas mediterranea [GN:pmed]
Related
pathway
pmed00010  Glycolysis / Gluconeogenesis
pmed00020  Citrate cycle (TCA cycle)
pmed00030  Pentose phosphate pathway
pmed00040  Pentose and glucuronate interconversions
pmed00051  Fructose and mannose metabolism
pmed00052  Galactose metabolism
pmed00053  Ascorbate and aldarate metabolism
pmed00061  Fatty acid biosynthesis
pmed00071  Fatty acid degradation
pmed00074  Mycolic acid biosynthesis
pmed00130  Ubiquinone and other terpenoid-quinone biosynthesis
pmed00190  Oxidative phosphorylation
pmed00220  Arginine biosynthesis
pmed00230  Purine metabolism
pmed00240  Pyrimidine metabolism
pmed00250  Alanine, aspartate and glutamate metabolism
pmed00260  Glycine, serine and threonine metabolism
pmed00261  Monobactam biosynthesis
pmed00270  Cysteine and methionine metabolism
pmed00280  Valine, leucine and isoleucine degradation
pmed00290  Valine, leucine and isoleucine biosynthesis
pmed00300  Lysine biosynthesis
pmed00310  Lysine degradation
pmed00330  Arginine and proline metabolism
pmed00332  Carbapenem biosynthesis
pmed00340  Histidine metabolism
pmed00350  Tyrosine metabolism
pmed00360  Phenylalanine metabolism
pmed00362  Benzoate degradation
pmed00380  Tryptophan metabolism
pmed00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pmed00401  Novobiocin biosynthesis
pmed00410  beta-Alanine metabolism
pmed00430  Taurine and hypotaurine metabolism
pmed00450  Selenocompound metabolism
pmed00460  Cyanoamino acid metabolism
pmed00470  D-Amino acid metabolism
pmed00480  Glutathione metabolism
pmed00500  Starch and sucrose metabolism
pmed00520  Amino sugar and nucleotide sugar metabolism
pmed00521  Streptomycin biosynthesis
pmed00523  Polyketide sugar unit biosynthesis
pmed00525  Acarbose and validamycin biosynthesis
pmed00540  Lipopolysaccharide biosynthesis
pmed00541  O-Antigen nucleotide sugar biosynthesis
pmed00543  Exopolysaccharide biosynthesis
pmed00550  Peptidoglycan biosynthesis
pmed00561  Glycerolipid metabolism
pmed00562  Inositol phosphate metabolism
pmed00564  Glycerophospholipid metabolism
pmed00592  alpha-Linolenic acid metabolism
pmed00620  Pyruvate metabolism
pmed00621  Dioxin degradation
pmed00622  Xylene degradation
pmed00625  Chloroalkane and chloroalkene degradation
pmed00626  Naphthalene degradation
pmed00627  Aminobenzoate degradation
pmed00630  Glyoxylate and dicarboxylate metabolism
pmed00640  Propanoate metabolism
pmed00643  Styrene degradation
pmed00650  Butanoate metabolism
pmed00660  C5-Branched dibasic acid metabolism
pmed00670  One carbon pool by folate
pmed00680  Methane metabolism
pmed00710  Carbon fixation by Calvin cycle
pmed00720  Other carbon fixation pathways
pmed00730  Thiamine metabolism
pmed00740  Riboflavin metabolism
pmed00750  Vitamin B6 metabolism
pmed00760  Nicotinate and nicotinamide metabolism
pmed00770  Pantothenate and CoA biosynthesis
pmed00780  Biotin metabolism
pmed00785  Lipoic acid metabolism
pmed00790  Folate biosynthesis
pmed00860  Porphyrin metabolism
pmed00900  Terpenoid backbone biosynthesis
pmed00907  Pinene, camphor and geraniol degradation
pmed00910  Nitrogen metabolism
pmed00920  Sulfur metabolism
pmed00930  Caprolactam degradation
pmed00946  Degradation of flavonoids
pmed00984  Steroid degradation
pmed00996  Biosynthesis of various alkaloids
pmed00997  Biosynthesis of various other secondary metabolites
pmed00999  Biosynthesis of various plant secondary metabolites
pmed01040  Biosynthesis of unsaturated fatty acids
pmed01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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