KEGG   PATHWAY: pmes01100
Entry
pmes01100                   Pathway                                
Name
Metabolic pathways - Paraglaciecola mesophila
Class
Pathway map
pmes01100  Metabolic pathways
pmes01100

Module
pmes_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pmes01100]
pmes_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pmes01100]
pmes_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pmes01100]
pmes_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pmes01100]
pmes_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pmes01100]
pmes_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pmes01100]
pmes_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pmes01100]
pmes_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pmes01100]
pmes_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pmes01100]
pmes_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pmes01100]
pmes_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pmes01100]
pmes_M00012  Glyoxylate cycle [PATH:pmes01100]
pmes_M00015  Proline biosynthesis, glutamate => proline [PATH:pmes01100]
pmes_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pmes01100]
pmes_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pmes01100]
pmes_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pmes01100]
pmes_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pmes01100]
pmes_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pmes01100]
pmes_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pmes01100]
pmes_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pmes01100]
pmes_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pmes01100]
pmes_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pmes01100]
pmes_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pmes01100]
pmes_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pmes01100]
pmes_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pmes01100]
pmes_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pmes01100]
pmes_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pmes01100]
pmes_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pmes01100]
pmes_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pmes01100]
pmes_M00063  CMP-KDO biosynthesis [PATH:pmes01100]
pmes_M00082  Fatty acid biosynthesis, initiation [PATH:pmes01100]
pmes_M00083  Fatty acid biosynthesis, elongation [PATH:pmes01100]
pmes_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pmes01100]
pmes_M00087  beta-Oxidation [PATH:pmes01100]
pmes_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pmes01100]
pmes_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pmes01100]
pmes_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pmes01100]
pmes_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pmes01100]
pmes_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pmes01100]
pmes_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pmes01100]
pmes_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pmes01100]
pmes_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pmes01100]
pmes_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pmes01100]
pmes_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pmes01100]
pmes_M00149  Succinate dehydrogenase, prokaryotes [PATH:pmes01100]
pmes_M00151  Cytochrome bc1 complex respiratory unit [PATH:pmes01100]
pmes_M00155  Cytochrome c oxidase, prokaryotes [PATH:pmes01100]
pmes_M00156  Cytochrome c oxidase, cbb3-type [PATH:pmes01100]
pmes_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pmes01100]
pmes_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pmes01100]
pmes_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pmes01100]
pmes_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmes01100]
pmes_M00417  Cytochrome o ubiquinol oxidase [PATH:pmes01100]
pmes_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pmes01100]
pmes_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pmes01100]
pmes_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pmes01100]
pmes_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pmes01100]
pmes_M00555  Betaine biosynthesis, choline => betaine [PATH:pmes01100]
pmes_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pmes01100]
pmes_M00621  Glycine cleavage system [PATH:pmes01100]
pmes_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pmes01100]
pmes_M00793  dTDP-L-rhamnose biosynthesis [PATH:pmes01100]
pmes_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pmes01100]
pmes_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pmes01100]
pmes_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pmes01100]
pmes_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:pmes01100]
pmes_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pmes01100]
pmes_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pmes01100]
pmes_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pmes01100]
pmes_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pmes01100]
pmes_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pmes01100]
pmes_M00970  Proline degradation, proline => glutamate [PATH:pmes01100]
Organism
Paraglaciecola mesophila [GN:pmes]
Related
pathway
pmes00010  Glycolysis / Gluconeogenesis
pmes00020  Citrate cycle (TCA cycle)
pmes00030  Pentose phosphate pathway
pmes00040  Pentose and glucuronate interconversions
pmes00051  Fructose and mannose metabolism
pmes00052  Galactose metabolism
pmes00053  Ascorbate and aldarate metabolism
pmes00061  Fatty acid biosynthesis
pmes00071  Fatty acid degradation
pmes00130  Ubiquinone and other terpenoid-quinone biosynthesis
pmes00190  Oxidative phosphorylation
pmes00220  Arginine biosynthesis
pmes00230  Purine metabolism
pmes00240  Pyrimidine metabolism
pmes00250  Alanine, aspartate and glutamate metabolism
pmes00260  Glycine, serine and threonine metabolism
pmes00261  Monobactam biosynthesis
pmes00270  Cysteine and methionine metabolism
pmes00280  Valine, leucine and isoleucine degradation
pmes00290  Valine, leucine and isoleucine biosynthesis
pmes00300  Lysine biosynthesis
pmes00310  Lysine degradation
pmes00330  Arginine and proline metabolism
pmes00332  Carbapenem biosynthesis
pmes00340  Histidine metabolism
pmes00350  Tyrosine metabolism
pmes00360  Phenylalanine metabolism
pmes00361  Chlorocyclohexane and chlorobenzene degradation
pmes00362  Benzoate degradation
pmes00364  Fluorobenzoate degradation
pmes00380  Tryptophan metabolism
pmes00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pmes00401  Novobiocin biosynthesis
pmes00410  beta-Alanine metabolism
pmes00430  Taurine and hypotaurine metabolism
pmes00450  Selenocompound metabolism
pmes00460  Cyanoamino acid metabolism
pmes00470  D-Amino acid metabolism
pmes00480  Glutathione metabolism
pmes00500  Starch and sucrose metabolism
pmes00511  Other glycan degradation
pmes00520  Amino sugar and nucleotide sugar metabolism
pmes00521  Streptomycin biosynthesis
pmes00523  Polyketide sugar unit biosynthesis
pmes00525  Acarbose and validamycin biosynthesis
pmes00540  Lipopolysaccharide biosynthesis
pmes00541  O-Antigen nucleotide sugar biosynthesis
pmes00542  O-Antigen repeat unit biosynthesis
pmes00543  Exopolysaccharide biosynthesis
pmes00550  Peptidoglycan biosynthesis
pmes00552  Teichoic acid biosynthesis
pmes00561  Glycerolipid metabolism
pmes00562  Inositol phosphate metabolism
pmes00564  Glycerophospholipid metabolism
pmes00565  Ether lipid metabolism
pmes00590  Arachidonic acid metabolism
pmes00592  alpha-Linolenic acid metabolism
pmes00600  Sphingolipid metabolism
pmes00620  Pyruvate metabolism
pmes00623  Toluene degradation
pmes00625  Chloroalkane and chloroalkene degradation
pmes00626  Naphthalene degradation
pmes00630  Glyoxylate and dicarboxylate metabolism
pmes00633  Nitrotoluene degradation
pmes00640  Propanoate metabolism
pmes00643  Styrene degradation
pmes00650  Butanoate metabolism
pmes00660  C5-Branched dibasic acid metabolism
pmes00670  One carbon pool by folate
pmes00680  Methane metabolism
pmes00710  Carbon fixation by Calvin cycle
pmes00720  Other carbon fixation pathways
pmes00730  Thiamine metabolism
pmes00740  Riboflavin metabolism
pmes00750  Vitamin B6 metabolism
pmes00760  Nicotinate and nicotinamide metabolism
pmes00770  Pantothenate and CoA biosynthesis
pmes00780  Biotin metabolism
pmes00785  Lipoic acid metabolism
pmes00790  Folate biosynthesis
pmes00860  Porphyrin metabolism
pmes00900  Terpenoid backbone biosynthesis
pmes00907  Pinene, camphor and geraniol degradation
pmes00910  Nitrogen metabolism
pmes00920  Sulfur metabolism
pmes00930  Caprolactam degradation
pmes00946  Degradation of flavonoids
pmes00999  Biosynthesis of various plant secondary metabolites
pmes01040  Biosynthesis of unsaturated fatty acids
pmes01055  Biosynthesis of vancomycin group antibiotics
KO pathway
ko01100   
LinkDB

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