KEGG   PATHWAY: pmib01100
Entry
pmib01100                   Pathway                                
Name
Metabolic pathways - Proteus mirabilis BB2000
Class
Pathway map
pmib01100  Metabolic pathways
pmib01100

Module
pmib_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pmib01100]
pmib_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pmib01100]
pmib_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pmib01100]
pmib_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pmib01100]
pmib_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pmib01100]
pmib_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pmib01100]
pmib_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pmib01100]
pmib_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pmib01100]
pmib_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pmib01100]
pmib_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pmib01100]
pmib_M00012  Glyoxylate cycle [PATH:pmib01100]
pmib_M00015  Proline biosynthesis, glutamate => proline [PATH:pmib01100]
pmib_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pmib01100]
pmib_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pmib01100]
pmib_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pmib01100]
pmib_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pmib01100]
pmib_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pmib01100]
pmib_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pmib01100]
pmib_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pmib01100]
pmib_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pmib01100]
pmib_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pmib01100]
pmib_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pmib01100]
pmib_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pmib01100]
pmib_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pmib01100]
pmib_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pmib01100]
pmib_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pmib01100]
pmib_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pmib01100]
pmib_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pmib01100]
pmib_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pmib01100]
pmib_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pmib01100]
pmib_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pmib01100]
pmib_M00063  CMP-KDO biosynthesis [PATH:pmib01100]
pmib_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pmib01100]
pmib_M00082  Fatty acid biosynthesis, initiation [PATH:pmib01100]
pmib_M00083  Fatty acid biosynthesis, elongation [PATH:pmib01100]
pmib_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pmib01100]
pmib_M00087  beta-Oxidation [PATH:pmib01100]
pmib_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pmib01100]
pmib_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pmib01100]
pmib_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pmib01100]
pmib_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pmib01100]
pmib_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pmib01100]
pmib_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pmib01100]
pmib_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pmib01100]
pmib_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pmib01100]
pmib_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pmib01100]
pmib_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pmib01100]
pmib_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pmib01100]
pmib_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pmib01100]
pmib_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pmib01100]
pmib_M00140  C1-unit interconversion, prokaryotes [PATH:pmib01100]
pmib_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pmib01100]
pmib_M00150  Fumarate reductase, prokaryotes [PATH:pmib01100]
pmib_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pmib01100]
pmib_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pmib01100]
pmib_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pmib01100]
pmib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmib01100]
pmib_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pmib01100]
pmib_M00417  Cytochrome o ubiquinol oxidase [PATH:pmib01100]
pmib_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pmib01100]
pmib_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:pmib01100]
pmib_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pmib01100]
pmib_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pmib01100]
pmib_M00555  Betaine biosynthesis, choline => betaine [PATH:pmib01100]
pmib_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pmib01100]
pmib_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pmib01100]
pmib_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pmib01100]
pmib_M00621  Glycine cleavage system [PATH:pmib01100]
pmib_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pmib01100]
pmib_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pmib01100]
pmib_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pmib01100]
pmib_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pmib01100]
pmib_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pmib01100]
pmib_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pmib01100]
pmib_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pmib01100]
pmib_M00970  Proline degradation, proline => glutamate [PATH:pmib01100]
Organism
Proteus mirabilis BB2000 [GN:pmib]
Related
pathway
pmib00010  Glycolysis / Gluconeogenesis
pmib00020  Citrate cycle (TCA cycle)
pmib00030  Pentose phosphate pathway
pmib00040  Pentose and glucuronate interconversions
pmib00051  Fructose and mannose metabolism
pmib00052  Galactose metabolism
pmib00053  Ascorbate and aldarate metabolism
pmib00061  Fatty acid biosynthesis
pmib00071  Fatty acid degradation
pmib00130  Ubiquinone and other terpenoid-quinone biosynthesis
pmib00190  Oxidative phosphorylation
pmib00220  Arginine biosynthesis
pmib00230  Purine metabolism
pmib00240  Pyrimidine metabolism
pmib00250  Alanine, aspartate and glutamate metabolism
pmib00260  Glycine, serine and threonine metabolism
pmib00261  Monobactam biosynthesis
pmib00270  Cysteine and methionine metabolism
pmib00280  Valine, leucine and isoleucine degradation
pmib00290  Valine, leucine and isoleucine biosynthesis
pmib00300  Lysine biosynthesis
pmib00310  Lysine degradation
pmib00330  Arginine and proline metabolism
pmib00332  Carbapenem biosynthesis
pmib00340  Histidine metabolism
pmib00350  Tyrosine metabolism
pmib00360  Phenylalanine metabolism
pmib00362  Benzoate degradation
pmib00380  Tryptophan metabolism
pmib00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pmib00401  Novobiocin biosynthesis
pmib00410  beta-Alanine metabolism
pmib00430  Taurine and hypotaurine metabolism
pmib00440  Phosphonate and phosphinate metabolism
pmib00450  Selenocompound metabolism
pmib00460  Cyanoamino acid metabolism
pmib00470  D-Amino acid metabolism
pmib00480  Glutathione metabolism
pmib00500  Starch and sucrose metabolism
pmib00520  Amino sugar and nucleotide sugar metabolism
pmib00521  Streptomycin biosynthesis
pmib00523  Polyketide sugar unit biosynthesis
pmib00525  Acarbose and validamycin biosynthesis
pmib00540  Lipopolysaccharide biosynthesis
pmib00541  O-Antigen nucleotide sugar biosynthesis
pmib00542  O-Antigen repeat unit biosynthesis
pmib00543  Exopolysaccharide biosynthesis
pmib00550  Peptidoglycan biosynthesis
pmib00552  Teichoic acid biosynthesis
pmib00561  Glycerolipid metabolism
pmib00562  Inositol phosphate metabolism
pmib00564  Glycerophospholipid metabolism
pmib00565  Ether lipid metabolism
pmib00592  alpha-Linolenic acid metabolism
pmib00620  Pyruvate metabolism
pmib00625  Chloroalkane and chloroalkene degradation
pmib00626  Naphthalene degradation
pmib00627  Aminobenzoate degradation
pmib00630  Glyoxylate and dicarboxylate metabolism
pmib00640  Propanoate metabolism
pmib00650  Butanoate metabolism
pmib00660  C5-Branched dibasic acid metabolism
pmib00670  One carbon pool by folate
pmib00680  Methane metabolism
pmib00710  Carbon fixation by Calvin cycle
pmib00720  Other carbon fixation pathways
pmib00730  Thiamine metabolism
pmib00740  Riboflavin metabolism
pmib00750  Vitamin B6 metabolism
pmib00760  Nicotinate and nicotinamide metabolism
pmib00770  Pantothenate and CoA biosynthesis
pmib00780  Biotin metabolism
pmib00785  Lipoic acid metabolism
pmib00790  Folate biosynthesis
pmib00860  Porphyrin metabolism
pmib00900  Terpenoid backbone biosynthesis
pmib00907  Pinene, camphor and geraniol degradation
pmib00910  Nitrogen metabolism
pmib00920  Sulfur metabolism
pmib00930  Caprolactam degradation
pmib00999  Biosynthesis of various plant secondary metabolites
pmib01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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