PATHWAY: pmx01100 Help Entry pmx01100                    Pathway                                 Name Metabolic pathways - Persephonella marina Class BRITE hierarchy Pathway map pmx01100   Metabolic pathways Module pmx_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pmx01100] pmx_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pmx01100] pmx_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pmx01100] pmx_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pmx01100] pmx_M00015   Proline biosynthesis, glutamate => proline [PATH:pmx01100] pmx_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pmx01100] pmx_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pmx01100] pmx_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pmx01100] pmx_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pmx01100] pmx_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pmx01100] pmx_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pmx01100] pmx_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pmx01100] pmx_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pmx01100] pmx_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pmx01100] pmx_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pmx01100] pmx_M00063   CMP-KDO biosynthesis [PATH:pmx01100] pmx_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pmx01100] pmx_M00082   Fatty acid biosynthesis, initiation [PATH:pmx01100] pmx_M00083   Fatty acid biosynthesis, elongation [PATH:pmx01100] pmx_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pmx01100] pmx_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pmx01100] pmx_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pmx01100] pmx_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pmx01100] pmx_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pmx01100] pmx_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pmx01100] pmx_M00151   Cytochrome bc1 complex respiratory unit [PATH:pmx01100] pmx_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pmx01100] pmx_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pmx01100] pmx_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmx01100] pmx_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pmx01100] pmx_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pmx01100] pmx_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pmx01100] pmx_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pmx01100] pmx_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:pmx01100] pmx_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:pmx01100] pmx_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pmx01100] pmx_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pmx01100] Organism Persephonella marina [GN:pmx] Related pathway pmx00010   Glycolysis / Gluconeogenesis pmx00020   Citrate cycle (TCA cycle) pmx00030   Pentose phosphate pathway pmx00040   Pentose and glucuronate interconversions pmx00051   Fructose and mannose metabolism pmx00052   Galactose metabolism pmx00053   Ascorbate and aldarate metabolism pmx00061   Fatty acid biosynthesis pmx00130   Ubiquinone and other terpenoid-quinone biosynthesis pmx00190   Oxidative phosphorylation pmx00220   Arginine biosynthesis pmx00230   Purine metabolism pmx00240   Pyrimidine metabolism pmx00250   Alanine, aspartate and glutamate metabolism pmx00260   Glycine, serine and threonine metabolism pmx00261   Monobactam biosynthesis pmx00270   Cysteine and methionine metabolism pmx00280   Valine, leucine and isoleucine degradation pmx00290   Valine, leucine and isoleucine biosynthesis pmx00300   Lysine biosynthesis pmx00310   Lysine degradation pmx00330   Arginine and proline metabolism pmx00332   Carbapenem biosynthesis pmx00340   Histidine metabolism pmx00350   Tyrosine metabolism pmx00360   Phenylalanine metabolism pmx00380   Tryptophan metabolism pmx00400   Phenylalanine, tyrosine and tryptophan biosynthesis pmx00401   Novobiocin biosynthesis pmx00410   beta-Alanine metabolism pmx00450   Selenocompound metabolism pmx00460   Cyanoamino acid metabolism pmx00470   D-Amino acid metabolism pmx00480   Glutathione metabolism pmx00500   Starch and sucrose metabolism pmx00520   Amino sugar and nucleotide sugar metabolism pmx00521   Streptomycin biosynthesis pmx00540   Lipopolysaccharide biosynthesis pmx00541   O-Antigen nucleotide sugar biosynthesis pmx00550   Peptidoglycan biosynthesis pmx00552   Teichoic acid biosynthesis pmx00561   Glycerolipid metabolism pmx00562   Inositol phosphate metabolism pmx00564   Glycerophospholipid metabolism pmx00620   Pyruvate metabolism pmx00627   Aminobenzoate degradation pmx00630   Glyoxylate and dicarboxylate metabolism pmx00633   Nitrotoluene degradation pmx00640   Propanoate metabolism pmx00650   Butanoate metabolism pmx00660   C5-Branched dibasic acid metabolism pmx00670   One carbon pool by folate pmx00680   Methane metabolism pmx00710   Carbon fixation by Calvin cycle pmx00720   Other carbon fixation pathways pmx00730   Thiamine metabolism pmx00740   Riboflavin metabolism pmx00750   Vitamin B6 metabolism pmx00760   Nicotinate and nicotinamide metabolism pmx00770   Pantothenate and CoA biosynthesis pmx00780   Biotin metabolism pmx00785   Lipoic acid metabolism pmx00790   Folate biosynthesis pmx00860   Porphyrin metabolism pmx00900   Terpenoid backbone biosynthesis pmx00910   Nitrogen metabolism pmx00920   Sulfur metabolism pmx00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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