PATHWAY: pnb01100 Help Entry pnb01100                    Pathway                                 Name Metabolic pathways - Pseudomonas nunensis Class BRITE hierarchy Pathway map pnb01100   Metabolic pathways Module pnb_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pnb01100] pnb_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pnb01100] pnb_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pnb01100] pnb_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pnb01100] pnb_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pnb01100] pnb_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pnb01100] pnb_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pnb01100] pnb_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pnb01100] pnb_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pnb01100] pnb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pnb01100] pnb_M00015   Proline biosynthesis, glutamate => proline [PATH:pnb01100] pnb_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pnb01100] pnb_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pnb01100] pnb_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pnb01100] pnb_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pnb01100] pnb_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pnb01100] pnb_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pnb01100] pnb_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pnb01100] pnb_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pnb01100] pnb_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pnb01100] pnb_M00034   Methionine salvage pathway [PATH:pnb01100] pnb_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pnb01100] pnb_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pnb01100] pnb_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:pnb01100] pnb_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pnb01100] pnb_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pnb01100] pnb_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pnb01100] pnb_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pnb01100] pnb_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pnb01100] pnb_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pnb01100] pnb_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pnb01100] pnb_M00063   CMP-KDO biosynthesis [PATH:pnb01100] pnb_M00082   Fatty acid biosynthesis, initiation [PATH:pnb01100] pnb_M00083   Fatty acid biosynthesis, elongation [PATH:pnb01100] pnb_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pnb01100] pnb_M00087   beta-Oxidation [PATH:pnb01100] pnb_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pnb01100] pnb_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pnb01100] pnb_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pnb01100] pnb_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pnb01100] pnb_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pnb01100] pnb_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pnb01100] pnb_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pnb01100] pnb_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pnb01100] pnb_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pnb01100] pnb_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pnb01100] pnb_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pnb01100] pnb_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pnb01100] pnb_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pnb01100] pnb_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pnb01100] pnb_M00149   Succinate dehydrogenase, prokaryotes [PATH:pnb01100] pnb_M00151   Cytochrome bc1 complex respiratory unit [PATH:pnb01100] pnb_M00155   Cytochrome c oxidase, prokaryotes [PATH:pnb01100] pnb_M00156   Cytochrome c oxidase, cbb3-type [PATH:pnb01100] pnb_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pnb01100] pnb_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pnb01100] pnb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pnb01100] pnb_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pnb01100] pnb_M00417   Cytochrome o ubiquinol oxidase [PATH:pnb01100] pnb_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pnb01100] pnb_M00546   Purine degradation, xanthine => urea [PATH:pnb01100] pnb_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pnb01100] pnb_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pnb01100] pnb_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pnb01100] pnb_M00555   Betaine biosynthesis, choline => betaine [PATH:pnb01100] pnb_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pnb01100] pnb_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pnb01100] pnb_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pnb01100] pnb_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pnb01100] pnb_M00621   Glycine cleavage system [PATH:pnb01100] pnb_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:pnb01100] pnb_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pnb01100] pnb_M00793   dTDP-L-rhamnose biosynthesis [PATH:pnb01100] pnb_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pnb01100] pnb_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pnb01100] pnb_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pnb01100] pnb_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pnb01100] pnb_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pnb01100] pnb_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pnb01100] pnb_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pnb01100] pnb_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:pnb01100] pnb_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pnb01100] pnb_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pnb01100] pnb_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pnb01100] pnb_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pnb01100] pnb_M00970   Proline degradation, proline => glutamate [PATH:pnb01100] pnb_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:pnb01100] Organism Pseudomonas nunensis [GN:pnb] Related pathway pnb00010   Glycolysis / Gluconeogenesis pnb00020   Citrate cycle (TCA cycle) pnb00030   Pentose phosphate pathway pnb00040   Pentose and glucuronate interconversions pnb00051   Fructose and mannose metabolism pnb00052   Galactose metabolism pnb00053   Ascorbate and aldarate metabolism pnb00061   Fatty acid biosynthesis pnb00071   Fatty acid degradation pnb00130   Ubiquinone and other terpenoid-quinone biosynthesis pnb00190   Oxidative phosphorylation pnb00220   Arginine biosynthesis pnb00230   Purine metabolism pnb00240   Pyrimidine metabolism pnb00250   Alanine, aspartate and glutamate metabolism pnb00260   Glycine, serine and threonine metabolism pnb00261   Monobactam biosynthesis pnb00270   Cysteine and methionine metabolism pnb00280   Valine, leucine and isoleucine degradation pnb00290   Valine, leucine and isoleucine biosynthesis pnb00300   Lysine biosynthesis pnb00310   Lysine degradation pnb00330   Arginine and proline metabolism pnb00332   Carbapenem biosynthesis pnb00340   Histidine metabolism pnb00350   Tyrosine metabolism pnb00360   Phenylalanine metabolism pnb00361   Chlorocyclohexane and chlorobenzene degradation pnb00362   Benzoate degradation pnb00364   Fluorobenzoate degradation pnb00380   Tryptophan metabolism pnb00400   Phenylalanine, tyrosine and tryptophan biosynthesis pnb00401   Novobiocin biosynthesis pnb00410   beta-Alanine metabolism pnb00430   Taurine and hypotaurine metabolism pnb00440   Phosphonate and phosphinate metabolism pnb00450   Selenocompound metabolism pnb00460   Cyanoamino acid metabolism pnb00470   D-Amino acid metabolism pnb00480   Glutathione metabolism pnb00500   Starch and sucrose metabolism pnb00520   Amino sugar and nucleotide sugar metabolism pnb00521   Streptomycin biosynthesis pnb00523   Polyketide sugar unit biosynthesis pnb00525   Acarbose and validamycin biosynthesis pnb00540   Lipopolysaccharide biosynthesis pnb00541   O-Antigen nucleotide sugar biosynthesis pnb00543   Exopolysaccharide biosynthesis pnb00550   Peptidoglycan biosynthesis pnb00552   Teichoic acid biosynthesis pnb00561   Glycerolipid metabolism pnb00562   Inositol phosphate metabolism pnb00564   Glycerophospholipid metabolism pnb00592   alpha-Linolenic acid metabolism pnb00620   Pyruvate metabolism pnb00622   Xylene degradation pnb00623   Toluene degradation pnb00625   Chloroalkane and chloroalkene degradation pnb00626   Naphthalene degradation pnb00627   Aminobenzoate degradation pnb00630   Glyoxylate and dicarboxylate metabolism pnb00633   Nitrotoluene degradation pnb00640   Propanoate metabolism pnb00643   Styrene degradation pnb00650   Butanoate metabolism pnb00660   C5-Branched dibasic acid metabolism pnb00670   One carbon pool by folate pnb00680   Methane metabolism pnb00710   Carbon fixation by Calvin cycle pnb00720   Other carbon fixation pathways pnb00730   Thiamine metabolism pnb00740   Riboflavin metabolism pnb00750   Vitamin B6 metabolism pnb00760   Nicotinate and nicotinamide metabolism pnb00770   Pantothenate and CoA biosynthesis pnb00780   Biotin metabolism pnb00785   Lipoic acid metabolism pnb00790   Folate biosynthesis pnb00791   Atrazine degradation pnb00860   Porphyrin metabolism pnb00900   Terpenoid backbone biosynthesis pnb00906   Carotenoid biosynthesis pnb00907   Pinene, camphor and geraniol degradation pnb00910   Nitrogen metabolism pnb00920   Sulfur metabolism pnb00930   Caprolactam degradation pnb00946   Degradation of flavonoids pnb00984   Steroid degradation pnb00997   Biosynthesis of various other secondary metabolites pnb00998   Biosynthesis of various antibiotics pnb00999   Biosynthesis of various plant secondary metabolites pnb01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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