KEGG   PATHWAY: pne01100
Entry
pne01100                    Pathway                                
Name
Metabolic pathways - Polynucleobacter necessarius
Class
Pathway map
pne01100  Metabolic pathways
pne01100

Module
pne_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pne01100]
pne_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pne01100]
pne_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pne01100]
pne_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pne01100]
pne_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pne01100]
pne_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pne01100]
pne_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pne01100]
pne_M00015  Proline biosynthesis, glutamate => proline [PATH:pne01100]
pne_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pne01100]
pne_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pne01100]
pne_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pne01100]
pne_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pne01100]
pne_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pne01100]
pne_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pne01100]
pne_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pne01100]
pne_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pne01100]
pne_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pne01100]
pne_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pne01100]
pne_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pne01100]
pne_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pne01100]
pne_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pne01100]
pne_M00063  CMP-KDO biosynthesis [PATH:pne01100]
pne_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pne01100]
pne_M00082  Fatty acid biosynthesis, initiation [PATH:pne01100]
pne_M00083  Fatty acid biosynthesis, elongation [PATH:pne01100]
pne_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pne01100]
pne_M00087  beta-Oxidation [PATH:pne01100]
pne_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pne01100]
pne_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pne01100]
pne_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pne01100]
pne_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pne01100]
pne_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pne01100]
pne_M00149  Succinate dehydrogenase, prokaryotes [PATH:pne01100]
pne_M00151  Cytochrome bc1 complex respiratory unit [PATH:pne01100]
pne_M00155  Cytochrome c oxidase, prokaryotes [PATH:pne01100]
pne_M00156  Cytochrome c oxidase, cbb3-type [PATH:pne01100]
pne_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pne01100]
pne_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pne01100]
pne_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pne01100]
pne_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pne01100]
pne_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:pne01100]
pne_M00793  dTDP-L-rhamnose biosynthesis [PATH:pne01100]
pne_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pne01100]
pne_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pne01100]
pne_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pne01100]
Organism
Polynucleobacter necessarius [GN:pne]
Related
pathway
pne00010  Glycolysis / Gluconeogenesis
pne00020  Citrate cycle (TCA cycle)
pne00030  Pentose phosphate pathway
pne00040  Pentose and glucuronate interconversions
pne00051  Fructose and mannose metabolism
pne00052  Galactose metabolism
pne00061  Fatty acid biosynthesis
pne00071  Fatty acid degradation
pne00130  Ubiquinone and other terpenoid-quinone biosynthesis
pne00190  Oxidative phosphorylation
pne00220  Arginine biosynthesis
pne00230  Purine metabolism
pne00240  Pyrimidine metabolism
pne00250  Alanine, aspartate and glutamate metabolism
pne00260  Glycine, serine and threonine metabolism
pne00261  Monobactam biosynthesis
pne00270  Cysteine and methionine metabolism
pne00280  Valine, leucine and isoleucine degradation
pne00290  Valine, leucine and isoleucine biosynthesis
pne00300  Lysine biosynthesis
pne00310  Lysine degradation
pne00330  Arginine and proline metabolism
pne00332  Carbapenem biosynthesis
pne00340  Histidine metabolism
pne00350  Tyrosine metabolism
pne00360  Phenylalanine metabolism
pne00362  Benzoate degradation
pne00380  Tryptophan metabolism
pne00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pne00401  Novobiocin biosynthesis
pne00410  beta-Alanine metabolism
pne00450  Selenocompound metabolism
pne00460  Cyanoamino acid metabolism
pne00470  D-Amino acid metabolism
pne00480  Glutathione metabolism
pne00500  Starch and sucrose metabolism
pne00520  Amino sugar and nucleotide sugar metabolism
pne00521  Streptomycin biosynthesis
pne00523  Polyketide sugar unit biosynthesis
pne00525  Acarbose and validamycin biosynthesis
pne00540  Lipopolysaccharide biosynthesis
pne00541  O-Antigen nucleotide sugar biosynthesis
pne00550  Peptidoglycan biosynthesis
pne00552  Teichoic acid biosynthesis
pne00561  Glycerolipid metabolism
pne00562  Inositol phosphate metabolism
pne00564  Glycerophospholipid metabolism
pne00592  alpha-Linolenic acid metabolism
pne00620  Pyruvate metabolism
pne00630  Glyoxylate and dicarboxylate metabolism
pne00633  Nitrotoluene degradation
pne00640  Propanoate metabolism
pne00650  Butanoate metabolism
pne00660  C5-Branched dibasic acid metabolism
pne00670  One carbon pool by folate
pne00680  Methane metabolism
pne00710  Carbon fixation by Calvin cycle
pne00720  Other carbon fixation pathways
pne00730  Thiamine metabolism
pne00740  Riboflavin metabolism
pne00750  Vitamin B6 metabolism
pne00760  Nicotinate and nicotinamide metabolism
pne00770  Pantothenate and CoA biosynthesis
pne00780  Biotin metabolism
pne00785  Lipoic acid metabolism
pne00790  Folate biosynthesis
pne00860  Porphyrin metabolism
pne00900  Terpenoid backbone biosynthesis
pne00907  Pinene, camphor and geraniol degradation
pne00910  Nitrogen metabolism
pne00920  Sulfur metabolism
pne00999  Biosynthesis of various plant secondary metabolites
pne01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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