PATHWAY: poo01100 Help Entry poo01100                    Pathway                                 Name Metabolic pathways - Polaromonas sp. Pch-P Class BRITE hierarchy Pathway map poo01100   Metabolic pathways Module poo_M00002   Glycolysis, core module involving three-carbon compounds [PATH:poo01100] poo_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:poo01100] poo_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:poo01100] poo_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:poo01100] poo_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:poo01100] poo_M00012   Glyoxylate cycle [PATH:poo01100] poo_M00015   Proline biosynthesis, glutamate => proline [PATH:poo01100] poo_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:poo01100] poo_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:poo01100] poo_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:poo01100] poo_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:poo01100] poo_M00021   Cysteine biosynthesis, serine => cysteine [PATH:poo01100] poo_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:poo01100] poo_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:poo01100] poo_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:poo01100] poo_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:poo01100] poo_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:poo01100] poo_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:poo01100] poo_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:poo01100] poo_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:poo01100] poo_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:poo01100] poo_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:poo01100] poo_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:poo01100] poo_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:poo01100] poo_M00063   CMP-KDO biosynthesis [PATH:poo01100] poo_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:poo01100] poo_M00082   Fatty acid biosynthesis, initiation [PATH:poo01100] poo_M00083   Fatty acid biosynthesis, elongation [PATH:poo01100] poo_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:poo01100] poo_M00087   beta-Oxidation [PATH:poo01100] poo_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:poo01100] poo_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:poo01100] poo_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:poo01100] poo_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:poo01100] poo_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:poo01100] poo_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:poo01100] poo_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:poo01100] poo_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:poo01100] poo_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:poo01100] poo_M00149   Succinate dehydrogenase, prokaryotes [PATH:poo01100] poo_M00151   Cytochrome bc1 complex respiratory unit [PATH:poo01100] poo_M00155   Cytochrome c oxidase, prokaryotes [PATH:poo01100] poo_M00156   Cytochrome c oxidase, cbb3-type [PATH:poo01100] poo_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:poo01100] poo_M00168   CAM (Crassulacean acid metabolism), dark [PATH:poo01100] poo_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:poo01100] poo_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:poo01100] poo_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:poo01100] poo_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:poo01100] poo_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:poo01100] poo_M00621   Glycine cleavage system [PATH:poo01100] poo_M00623   Phthalate degradation, phthalate => protocatechuate [PATH:poo01100] poo_M00793   dTDP-L-rhamnose biosynthesis [PATH:poo01100] poo_M00844   Arginine biosynthesis, ornithine => arginine [PATH:poo01100] poo_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:poo01100] poo_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:poo01100] poo_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:poo01100] poo_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:poo01100] poo_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:poo01100] poo_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:poo01100] poo_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:poo01100] poo_M00970   Proline degradation, proline => glutamate [PATH:poo01100] Organism Polaromonas sp. Pch-P [GN:poo] Related pathway poo00010   Glycolysis / Gluconeogenesis poo00020   Citrate cycle (TCA cycle) poo00030   Pentose phosphate pathway poo00040   Pentose and glucuronate interconversions poo00051   Fructose and mannose metabolism poo00052   Galactose metabolism poo00053   Ascorbate and aldarate metabolism poo00061   Fatty acid biosynthesis poo00071   Fatty acid degradation poo00130   Ubiquinone and other terpenoid-quinone biosynthesis poo00190   Oxidative phosphorylation poo00220   Arginine biosynthesis poo00230   Purine metabolism poo00240   Pyrimidine metabolism poo00250   Alanine, aspartate and glutamate metabolism poo00260   Glycine, serine and threonine metabolism poo00261   Monobactam biosynthesis poo00270   Cysteine and methionine metabolism poo00280   Valine, leucine and isoleucine degradation poo00290   Valine, leucine and isoleucine biosynthesis poo00300   Lysine biosynthesis poo00310   Lysine degradation poo00311   Penicillin and cephalosporin biosynthesis poo00330   Arginine and proline metabolism poo00332   Carbapenem biosynthesis poo00340   Histidine metabolism poo00350   Tyrosine metabolism poo00360   Phenylalanine metabolism poo00361   Chlorocyclohexane and chlorobenzene degradation poo00362   Benzoate degradation poo00364   Fluorobenzoate degradation poo00380   Tryptophan metabolism poo00400   Phenylalanine, tyrosine and tryptophan biosynthesis poo00401   Novobiocin biosynthesis poo00405   Phenazine biosynthesis poo00410   beta-Alanine metabolism poo00440   Phosphonate and phosphinate metabolism poo00450   Selenocompound metabolism poo00460   Cyanoamino acid metabolism poo00470   D-Amino acid metabolism poo00480   Glutathione metabolism poo00500   Starch and sucrose metabolism poo00520   Amino sugar and nucleotide sugar metabolism poo00521   Streptomycin biosynthesis poo00523   Polyketide sugar unit biosynthesis poo00525   Acarbose and validamycin biosynthesis poo00540   Lipopolysaccharide biosynthesis poo00541   O-Antigen nucleotide sugar biosynthesis poo00543   Exopolysaccharide biosynthesis poo00550   Peptidoglycan biosynthesis poo00552   Teichoic acid biosynthesis poo00561   Glycerolipid metabolism poo00562   Inositol phosphate metabolism poo00564   Glycerophospholipid metabolism poo00565   Ether lipid metabolism poo00592   alpha-Linolenic acid metabolism poo00620   Pyruvate metabolism poo00621   Dioxin degradation poo00622   Xylene degradation poo00623   Toluene degradation poo00624   Polycyclic aromatic hydrocarbon degradation poo00625   Chloroalkane and chloroalkene degradation poo00626   Naphthalene degradation poo00627   Aminobenzoate degradation poo00630   Glyoxylate and dicarboxylate metabolism poo00633   Nitrotoluene degradation poo00640   Propanoate metabolism poo00643   Styrene degradation poo00650   Butanoate metabolism poo00660   C5-Branched dibasic acid metabolism poo00670   One carbon pool by folate poo00680   Methane metabolism poo00710   Carbon fixation by Calvin cycle poo00720   Other carbon fixation pathways poo00730   Thiamine metabolism poo00740   Riboflavin metabolism poo00750   Vitamin B6 metabolism poo00760   Nicotinate and nicotinamide metabolism poo00770   Pantothenate and CoA biosynthesis poo00780   Biotin metabolism poo00785   Lipoic acid metabolism poo00790   Folate biosynthesis poo00791   Atrazine degradation poo00860   Porphyrin metabolism poo00900   Terpenoid backbone biosynthesis poo00906   Carotenoid biosynthesis poo00907   Pinene, camphor and geraniol degradation poo00910   Nitrogen metabolism poo00920   Sulfur metabolism poo00930   Caprolactam degradation poo01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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