PATHWAY: ppaf01100 Help Entry ppaf01100                   Pathway                                 Name Metabolic pathways - Pelagovum pacificum Class BRITE hierarchy Pathway map ppaf01100   Metabolic pathways Module ppaf_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ppaf01100] ppaf_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ppaf01100] ppaf_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppaf01100] ppaf_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppaf01100] ppaf_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ppaf01100] ppaf_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppaf01100] ppaf_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppaf01100] ppaf_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppaf01100] ppaf_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppaf01100] ppaf_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppaf01100] ppaf_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppaf01100] ppaf_M00012   Glyoxylate cycle [PATH:ppaf01100] ppaf_M00015   Proline biosynthesis, glutamate => proline [PATH:ppaf01100] ppaf_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppaf01100] ppaf_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppaf01100] ppaf_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ppaf01100] ppaf_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ppaf01100] ppaf_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppaf01100] ppaf_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppaf01100] ppaf_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ppaf01100] ppaf_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:ppaf01100] ppaf_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppaf01100] ppaf_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppaf01100] ppaf_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppaf01100] ppaf_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppaf01100] ppaf_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppaf01100] ppaf_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppaf01100] ppaf_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ppaf01100] ppaf_M00082   Fatty acid biosynthesis, initiation [PATH:ppaf01100] ppaf_M00083   Fatty acid biosynthesis, elongation [PATH:ppaf01100] ppaf_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:ppaf01100] ppaf_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ppaf01100] ppaf_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppaf01100] ppaf_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppaf01100] ppaf_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:ppaf01100] ppaf_M00149   Succinate dehydrogenase, prokaryotes [PATH:ppaf01100] ppaf_M00151   Cytochrome bc1 complex respiratory unit [PATH:ppaf01100] ppaf_M00155   Cytochrome c oxidase, prokaryotes [PATH:ppaf01100] ppaf_M00156   Cytochrome c oxidase, cbb3-type [PATH:ppaf01100] ppaf_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ppaf01100] ppaf_M00169   CAM (Crassulacean acid metabolism), light [PATH:ppaf01100] ppaf_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppaf01100] ppaf_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppaf01100] ppaf_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppaf01100] ppaf_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ppaf01100] ppaf_M00555   Betaine biosynthesis, choline => betaine [PATH:ppaf01100] ppaf_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppaf01100] ppaf_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ppaf01100] ppaf_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ppaf01100] ppaf_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ppaf01100] ppaf_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppaf01100] ppaf_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppaf01100] ppaf_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppaf01100] ppaf_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:ppaf01100] ppaf_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ppaf01100] ppaf_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ppaf01100] ppaf_M00970   Proline degradation, proline => glutamate [PATH:ppaf01100] Organism Pelagovum pacificum [GN:ppaf] Related pathway ppaf00010   Glycolysis / Gluconeogenesis ppaf00020   Citrate cycle (TCA cycle) ppaf00030   Pentose phosphate pathway ppaf00040   Pentose and glucuronate interconversions ppaf00051   Fructose and mannose metabolism ppaf00052   Galactose metabolism ppaf00053   Ascorbate and aldarate metabolism ppaf00061   Fatty acid biosynthesis ppaf00071   Fatty acid degradation ppaf00074   Mycolic acid biosynthesis ppaf00121   Secondary bile acid biosynthesis ppaf00130   Ubiquinone and other terpenoid-quinone biosynthesis ppaf00190   Oxidative phosphorylation ppaf00220   Arginine biosynthesis ppaf00230   Purine metabolism ppaf00240   Pyrimidine metabolism ppaf00250   Alanine, aspartate and glutamate metabolism ppaf00260   Glycine, serine and threonine metabolism ppaf00261   Monobactam biosynthesis ppaf00270   Cysteine and methionine metabolism ppaf00280   Valine, leucine and isoleucine degradation ppaf00290   Valine, leucine and isoleucine biosynthesis ppaf00300   Lysine biosynthesis ppaf00310   Lysine degradation ppaf00311   Penicillin and cephalosporin biosynthesis ppaf00330   Arginine and proline metabolism ppaf00332   Carbapenem biosynthesis ppaf00340   Histidine metabolism ppaf00350   Tyrosine metabolism ppaf00360   Phenylalanine metabolism ppaf00361   Chlorocyclohexane and chlorobenzene degradation ppaf00362   Benzoate degradation ppaf00380   Tryptophan metabolism ppaf00400   Phenylalanine, tyrosine and tryptophan biosynthesis ppaf00401   Novobiocin biosynthesis ppaf00405   Phenazine biosynthesis ppaf00410   beta-Alanine metabolism ppaf00430   Taurine and hypotaurine metabolism ppaf00440   Phosphonate and phosphinate metabolism ppaf00450   Selenocompound metabolism ppaf00460   Cyanoamino acid metabolism ppaf00470   D-Amino acid metabolism ppaf00480   Glutathione metabolism ppaf00500   Starch and sucrose metabolism ppaf00511   Other glycan degradation ppaf00520   Amino sugar and nucleotide sugar metabolism ppaf00521   Streptomycin biosynthesis ppaf00540   Lipopolysaccharide biosynthesis ppaf00541   O-Antigen nucleotide sugar biosynthesis ppaf00543   Exopolysaccharide biosynthesis ppaf00550   Peptidoglycan biosynthesis ppaf00552   Teichoic acid biosynthesis ppaf00561   Glycerolipid metabolism ppaf00562   Inositol phosphate metabolism ppaf00564   Glycerophospholipid metabolism ppaf00600   Sphingolipid metabolism ppaf00620   Pyruvate metabolism ppaf00622   Xylene degradation ppaf00625   Chloroalkane and chloroalkene degradation ppaf00626   Naphthalene degradation ppaf00627   Aminobenzoate degradation ppaf00630   Glyoxylate and dicarboxylate metabolism ppaf00640   Propanoate metabolism ppaf00643   Styrene degradation ppaf00650   Butanoate metabolism ppaf00660   C5-Branched dibasic acid metabolism ppaf00670   One carbon pool by folate ppaf00680   Methane metabolism ppaf00710   Carbon fixation by Calvin cycle ppaf00720   Other carbon fixation pathways ppaf00730   Thiamine metabolism ppaf00740   Riboflavin metabolism ppaf00750   Vitamin B6 metabolism ppaf00760   Nicotinate and nicotinamide metabolism ppaf00770   Pantothenate and CoA biosynthesis ppaf00780   Biotin metabolism ppaf00785   Lipoic acid metabolism ppaf00790   Folate biosynthesis ppaf00791   Atrazine degradation ppaf00860   Porphyrin metabolism ppaf00900   Terpenoid backbone biosynthesis ppaf00906   Carotenoid biosynthesis ppaf00907   Pinene, camphor and geraniol degradation ppaf00910   Nitrogen metabolism ppaf00920   Sulfur metabolism ppaf00930   Caprolactam degradation ppaf00946   Degradation of flavonoids ppaf00998   Biosynthesis of various antibiotics ppaf00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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