PATHWAY: ppee01100 Help Entry ppee01100                   Pathway                                 Name Metabolic pathways - Proteus penneri Class BRITE hierarchy Pathway map ppee01100   Metabolic pathways Module ppee_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ppee01100] ppee_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppee01100] ppee_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppee01100] ppee_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ppee01100] ppee_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppee01100] ppee_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppee01100] ppee_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppee01100] ppee_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppee01100] ppee_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppee01100] ppee_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppee01100] ppee_M00012   Glyoxylate cycle [PATH:ppee01100] ppee_M00015   Proline biosynthesis, glutamate => proline [PATH:ppee01100] ppee_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppee01100] ppee_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ppee01100] ppee_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppee01100] ppee_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppee01100] ppee_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ppee01100] ppee_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ppee01100] ppee_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppee01100] ppee_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppee01100] ppee_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ppee01100] ppee_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ppee01100] ppee_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ppee01100] ppee_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ppee01100] ppee_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppee01100] ppee_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppee01100] ppee_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppee01100] ppee_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ppee01100] ppee_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppee01100] ppee_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppee01100] ppee_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ppee01100] ppee_M00063   CMP-KDO biosynthesis [PATH:ppee01100] ppee_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ppee01100] ppee_M00082   Fatty acid biosynthesis, initiation [PATH:ppee01100] ppee_M00083   Fatty acid biosynthesis, elongation [PATH:ppee01100] ppee_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ppee01100] ppee_M00087   beta-Oxidation [PATH:ppee01100] ppee_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppee01100] ppee_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ppee01100] ppee_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ppee01100] ppee_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppee01100] ppee_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ppee01100] ppee_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ppee01100] ppee_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppee01100] ppee_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppee01100] ppee_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppee01100] ppee_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppee01100] ppee_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppee01100] ppee_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ppee01100] ppee_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ppee01100] ppee_M00140   C1-unit interconversion, prokaryotes [PATH:ppee01100] ppee_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ppee01100] ppee_M00149   Succinate dehydrogenase, prokaryotes [PATH:ppee01100] ppee_M00150   Fumarate reductase, prokaryotes [PATH:ppee01100] ppee_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ppee01100] ppee_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ppee01100] ppee_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppee01100] ppee_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ppee01100] ppee_M00417   Cytochrome o ubiquinol oxidase [PATH:ppee01100] ppee_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppee01100] ppee_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:ppee01100] ppee_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ppee01100] ppee_M00555   Betaine biosynthesis, choline => betaine [PATH:ppee01100] ppee_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppee01100] ppee_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ppee01100] ppee_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ppee01100] ppee_M00621   Glycine cleavage system [PATH:ppee01100] ppee_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ppee01100] ppee_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ppee01100] ppee_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ppee01100] ppee_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppee01100] ppee_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ppee01100] ppee_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppee01100] ppee_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppee01100] ppee_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ppee01100] ppee_M00970   Proline degradation, proline => glutamate [PATH:ppee01100] Organism Proteus penneri [GN:ppee] Related pathway ppee00010   Glycolysis / Gluconeogenesis ppee00020   Citrate cycle (TCA cycle) ppee00030   Pentose phosphate pathway ppee00040   Pentose and glucuronate interconversions ppee00051   Fructose and mannose metabolism ppee00052   Galactose metabolism ppee00053   Ascorbate and aldarate metabolism ppee00061   Fatty acid biosynthesis ppee00071   Fatty acid degradation ppee00130   Ubiquinone and other terpenoid-quinone biosynthesis ppee00190   Oxidative phosphorylation ppee00220   Arginine biosynthesis ppee00230   Purine metabolism ppee00240   Pyrimidine metabolism ppee00250   Alanine, aspartate and glutamate metabolism ppee00260   Glycine, serine and threonine metabolism ppee00261   Monobactam biosynthesis ppee00270   Cysteine and methionine metabolism ppee00280   Valine, leucine and isoleucine degradation ppee00290   Valine, leucine and isoleucine biosynthesis ppee00300   Lysine biosynthesis ppee00310   Lysine degradation ppee00330   Arginine and proline metabolism ppee00332   Carbapenem biosynthesis ppee00340   Histidine metabolism ppee00350   Tyrosine metabolism ppee00360   Phenylalanine metabolism ppee00362   Benzoate degradation ppee00380   Tryptophan metabolism ppee00400   Phenylalanine, tyrosine and tryptophan biosynthesis ppee00401   Novobiocin biosynthesis ppee00410   beta-Alanine metabolism ppee00430   Taurine and hypotaurine metabolism ppee00440   Phosphonate and phosphinate metabolism ppee00450   Selenocompound metabolism ppee00460   Cyanoamino acid metabolism ppee00470   D-Amino acid metabolism ppee00480   Glutathione metabolism ppee00500   Starch and sucrose metabolism ppee00520   Amino sugar and nucleotide sugar metabolism ppee00521   Streptomycin biosynthesis ppee00523   Polyketide sugar unit biosynthesis ppee00525   Acarbose and validamycin biosynthesis ppee00540   Lipopolysaccharide biosynthesis ppee00541   O-Antigen nucleotide sugar biosynthesis ppee00542   O-Antigen repeat unit biosynthesis ppee00543   Exopolysaccharide biosynthesis ppee00550   Peptidoglycan biosynthesis ppee00552   Teichoic acid biosynthesis ppee00561   Glycerolipid metabolism ppee00562   Inositol phosphate metabolism ppee00564   Glycerophospholipid metabolism ppee00565   Ether lipid metabolism ppee00592   alpha-Linolenic acid metabolism ppee00620   Pyruvate metabolism ppee00625   Chloroalkane and chloroalkene degradation ppee00626   Naphthalene degradation ppee00627   Aminobenzoate degradation ppee00630   Glyoxylate and dicarboxylate metabolism ppee00633   Nitrotoluene degradation ppee00640   Propanoate metabolism ppee00650   Butanoate metabolism ppee00660   C5-Branched dibasic acid metabolism ppee00670   One carbon pool by folate ppee00680   Methane metabolism ppee00710   Carbon fixation by Calvin cycle ppee00720   Other carbon fixation pathways ppee00730   Thiamine metabolism ppee00740   Riboflavin metabolism ppee00750   Vitamin B6 metabolism ppee00760   Nicotinate and nicotinamide metabolism ppee00770   Pantothenate and CoA biosynthesis ppee00780   Biotin metabolism ppee00785   Lipoic acid metabolism ppee00790   Folate biosynthesis ppee00860   Porphyrin metabolism ppee00900   Terpenoid backbone biosynthesis ppee00907   Pinene, camphor and geraniol degradation ppee00910   Nitrogen metabolism ppee00920   Sulfur metabolism ppee00930   Caprolactam degradation ppee00999   Biosynthesis of various plant secondary metabolites ppee01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system