PATHWAY: ppic01100 Help Entry ppic01100                   Pathway                                 Name Metabolic pathways - Phaeobacter piscinae Class BRITE hierarchy Pathway map ppic01100   Metabolic pathways Module ppic_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ppic01100] ppic_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppic01100] ppic_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ppic01100] ppic_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppic01100] ppic_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppic01100] ppic_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppic01100] ppic_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppic01100] ppic_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppic01100] ppic_M00015   Proline biosynthesis, glutamate => proline [PATH:ppic01100] ppic_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppic01100] ppic_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppic01100] ppic_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ppic01100] ppic_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ppic01100] ppic_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppic01100] ppic_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppic01100] ppic_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ppic01100] ppic_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppic01100] ppic_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppic01100] ppic_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppic01100] ppic_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppic01100] ppic_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppic01100] ppic_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppic01100] ppic_M00082   Fatty acid biosynthesis, initiation [PATH:ppic01100] ppic_M00083   Fatty acid biosynthesis, elongation [PATH:ppic01100] ppic_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ppic01100] ppic_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:ppic01100] ppic_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppic01100] ppic_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ppic01100] ppic_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppic01100] ppic_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ppic01100] ppic_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppic01100] ppic_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppic01100] ppic_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppic01100] ppic_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:ppic01100] ppic_M00140   C1-unit interconversion, prokaryotes [PATH:ppic01100] ppic_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ppic01100] ppic_M00149   Succinate dehydrogenase, prokaryotes [PATH:ppic01100] ppic_M00151   Cytochrome bc1 complex respiratory unit [PATH:ppic01100] ppic_M00155   Cytochrome c oxidase, prokaryotes [PATH:ppic01100] ppic_M00156   Cytochrome c oxidase, cbb3-type [PATH:ppic01100] ppic_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ppic01100] ppic_M00169   CAM (Crassulacean acid metabolism), light [PATH:ppic01100] ppic_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppic01100] ppic_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ppic01100] ppic_M00373   Ethylmalonyl pathway [PATH:ppic01100] ppic_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppic01100] ppic_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppic01100] ppic_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ppic01100] ppic_M00555   Betaine biosynthesis, choline => betaine [PATH:ppic01100] ppic_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppic01100] ppic_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ppic01100] ppic_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ppic01100] ppic_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:ppic01100] ppic_M00621   Glycine cleavage system [PATH:ppic01100] ppic_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ppic01100] ppic_M00793   dTDP-L-rhamnose biosynthesis [PATH:ppic01100] ppic_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ppic01100] ppic_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppic01100] ppic_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppic01100] ppic_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppic01100] ppic_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:ppic01100] ppic_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ppic01100] ppic_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ppic01100] ppic_M00970   Proline degradation, proline => glutamate [PATH:ppic01100] Organism Phaeobacter piscinae [GN:ppic] Related pathway ppic00010   Glycolysis / Gluconeogenesis ppic00020   Citrate cycle (TCA cycle) ppic00030   Pentose phosphate pathway ppic00040   Pentose and glucuronate interconversions ppic00051   Fructose and mannose metabolism ppic00052   Galactose metabolism ppic00053   Ascorbate and aldarate metabolism ppic00061   Fatty acid biosynthesis ppic00071   Fatty acid degradation ppic00100   Steroid biosynthesis ppic00121   Secondary bile acid biosynthesis ppic00130   Ubiquinone and other terpenoid-quinone biosynthesis ppic00190   Oxidative phosphorylation ppic00220   Arginine biosynthesis ppic00230   Purine metabolism ppic00240   Pyrimidine metabolism ppic00250   Alanine, aspartate and glutamate metabolism ppic00260   Glycine, serine and threonine metabolism ppic00261   Monobactam biosynthesis ppic00270   Cysteine and methionine metabolism ppic00280   Valine, leucine and isoleucine degradation ppic00290   Valine, leucine and isoleucine biosynthesis ppic00300   Lysine biosynthesis ppic00310   Lysine degradation ppic00330   Arginine and proline metabolism ppic00332   Carbapenem biosynthesis ppic00340   Histidine metabolism ppic00350   Tyrosine metabolism ppic00360   Phenylalanine metabolism ppic00361   Chlorocyclohexane and chlorobenzene degradation ppic00362   Benzoate degradation ppic00364   Fluorobenzoate degradation ppic00380   Tryptophan metabolism ppic00400   Phenylalanine, tyrosine and tryptophan biosynthesis ppic00401   Novobiocin biosynthesis ppic00405   Phenazine biosynthesis ppic00410   beta-Alanine metabolism ppic00430   Taurine and hypotaurine metabolism ppic00440   Phosphonate and phosphinate metabolism ppic00450   Selenocompound metabolism ppic00460   Cyanoamino acid metabolism ppic00470   D-Amino acid metabolism ppic00480   Glutathione metabolism ppic00500   Starch and sucrose metabolism ppic00520   Amino sugar and nucleotide sugar metabolism ppic00521   Streptomycin biosynthesis ppic00523   Polyketide sugar unit biosynthesis ppic00525   Acarbose and validamycin biosynthesis ppic00540   Lipopolysaccharide biosynthesis ppic00541   O-Antigen nucleotide sugar biosynthesis ppic00543   Exopolysaccharide biosynthesis ppic00550   Peptidoglycan biosynthesis ppic00552   Teichoic acid biosynthesis ppic00561   Glycerolipid metabolism ppic00562   Inositol phosphate metabolism ppic00564   Glycerophospholipid metabolism ppic00600   Sphingolipid metabolism ppic00620   Pyruvate metabolism ppic00621   Dioxin degradation ppic00622   Xylene degradation ppic00623   Toluene degradation ppic00625   Chloroalkane and chloroalkene degradation ppic00626   Naphthalene degradation ppic00627   Aminobenzoate degradation ppic00630   Glyoxylate and dicarboxylate metabolism ppic00640   Propanoate metabolism ppic00643   Styrene degradation ppic00650   Butanoate metabolism ppic00660   C5-Branched dibasic acid metabolism ppic00670   One carbon pool by folate ppic00680   Methane metabolism ppic00710   Carbon fixation by Calvin cycle ppic00720   Other carbon fixation pathways ppic00730   Thiamine metabolism ppic00740   Riboflavin metabolism ppic00750   Vitamin B6 metabolism ppic00760   Nicotinate and nicotinamide metabolism ppic00770   Pantothenate and CoA biosynthesis ppic00780   Biotin metabolism ppic00785   Lipoic acid metabolism ppic00790   Folate biosynthesis ppic00791   Atrazine degradation ppic00860   Porphyrin metabolism ppic00900   Terpenoid backbone biosynthesis ppic00906   Carotenoid biosynthesis ppic00907   Pinene, camphor and geraniol degradation ppic00910   Nitrogen metabolism ppic00920   Sulfur metabolism ppic00930   Caprolactam degradation ppic00946   Degradation of flavonoids ppic00998   Biosynthesis of various antibiotics ppic00999   Biosynthesis of various plant secondary metabolites ppic01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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