KEGG   PATHWAY: ppro01100
Entry
ppro01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas protegens Cab57
Class
Pathway map
ppro01100  Metabolic pathways
ppro01100

Module
ppro_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppro01100]
ppro_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppro01100]
ppro_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppro01100]
ppro_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppro01100]
ppro_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppro01100]
ppro_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppro01100]
ppro_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppro01100]
ppro_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppro01100]
ppro_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppro01100]
ppro_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppro01100]
ppro_M00015  Proline biosynthesis, glutamate => proline [PATH:ppro01100]
ppro_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppro01100]
ppro_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ppro01100]
ppro_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppro01100]
ppro_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppro01100]
ppro_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ppro01100]
ppro_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ppro01100]
ppro_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppro01100]
ppro_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppro01100]
ppro_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ppro01100]
ppro_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ppro01100]
ppro_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ppro01100]
ppro_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ppro01100]
ppro_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:ppro01100]
ppro_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppro01100]
ppro_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppro01100]
ppro_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppro01100]
ppro_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppro01100]
ppro_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppro01100]
ppro_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppro01100]
ppro_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppro01100]
ppro_M00063  CMP-KDO biosynthesis [PATH:ppro01100]
ppro_M00082  Fatty acid biosynthesis, initiation [PATH:ppro01100]
ppro_M00083  Fatty acid biosynthesis, elongation [PATH:ppro01100]
ppro_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ppro01100]
ppro_M00087  beta-Oxidation [PATH:ppro01100]
ppro_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppro01100]
ppro_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppro01100]
ppro_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppro01100]
ppro_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ppro01100]
ppro_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppro01100]
ppro_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppro01100]
ppro_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppro01100]
ppro_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppro01100]
ppro_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppro01100]
ppro_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppro01100]
ppro_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ppro01100]
ppro_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:ppro01100]
ppro_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ppro01100]
ppro_M00149  Succinate dehydrogenase, prokaryotes [PATH:ppro01100]
ppro_M00151  Cytochrome bc1 complex respiratory unit [PATH:ppro01100]
ppro_M00155  Cytochrome c oxidase, prokaryotes [PATH:ppro01100]
ppro_M00156  Cytochrome c oxidase, cbb3-type [PATH:ppro01100]
ppro_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ppro01100]
ppro_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ppro01100]
ppro_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppro01100]
ppro_M00417  Cytochrome o ubiquinol oxidase [PATH:ppro01100]
ppro_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppro01100]
ppro_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:ppro01100]
ppro_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ppro01100]
ppro_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppro01100]
ppro_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:ppro01100]
ppro_M00555  Betaine biosynthesis, choline => betaine [PATH:ppro01100]
ppro_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ppro01100]
ppro_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppro01100]
ppro_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ppro01100]
ppro_M00621  Glycine cleavage system [PATH:ppro01100]
ppro_M00637  Anthranilate degradation, anthranilate => catechol [PATH:ppro01100]
ppro_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ppro01100]
ppro_M00790  Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:ppro01100]
ppro_M00793  dTDP-L-rhamnose biosynthesis [PATH:ppro01100]
ppro_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ppro01100]
ppro_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppro01100]
ppro_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ppro01100]
ppro_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppro01100]
ppro_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppro01100]
ppro_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppro01100]
ppro_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ppro01100]
ppro_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:ppro01100]
ppro_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:ppro01100]
ppro_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:ppro01100]
ppro_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ppro01100]
ppro_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ppro01100]
ppro_M00970  Proline degradation, proline => glutamate [PATH:ppro01100]
ppro_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:ppro01100]
Organism
Pseudomonas protegens Cab57 [GN:ppro]
Related
pathway
ppro00010  Glycolysis / Gluconeogenesis
ppro00020  Citrate cycle (TCA cycle)
ppro00030  Pentose phosphate pathway
ppro00040  Pentose and glucuronate interconversions
ppro00051  Fructose and mannose metabolism
ppro00052  Galactose metabolism
ppro00053  Ascorbate and aldarate metabolism
ppro00061  Fatty acid biosynthesis
ppro00071  Fatty acid degradation
ppro00130  Ubiquinone and other terpenoid-quinone biosynthesis
ppro00190  Oxidative phosphorylation
ppro00220  Arginine biosynthesis
ppro00230  Purine metabolism
ppro00240  Pyrimidine metabolism
ppro00250  Alanine, aspartate and glutamate metabolism
ppro00260  Glycine, serine and threonine metabolism
ppro00261  Monobactam biosynthesis
ppro00270  Cysteine and methionine metabolism
ppro00280  Valine, leucine and isoleucine degradation
ppro00290  Valine, leucine and isoleucine biosynthesis
ppro00300  Lysine biosynthesis
ppro00310  Lysine degradation
ppro00330  Arginine and proline metabolism
ppro00332  Carbapenem biosynthesis
ppro00333  Prodigiosin biosynthesis
ppro00340  Histidine metabolism
ppro00350  Tyrosine metabolism
ppro00360  Phenylalanine metabolism
ppro00361  Chlorocyclohexane and chlorobenzene degradation
ppro00362  Benzoate degradation
ppro00364  Fluorobenzoate degradation
ppro00380  Tryptophan metabolism
ppro00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ppro00401  Novobiocin biosynthesis
ppro00404  Staurosporine biosynthesis
ppro00410  beta-Alanine metabolism
ppro00430  Taurine and hypotaurine metabolism
ppro00440  Phosphonate and phosphinate metabolism
ppro00450  Selenocompound metabolism
ppro00460  Cyanoamino acid metabolism
ppro00470  D-Amino acid metabolism
ppro00480  Glutathione metabolism
ppro00500  Starch and sucrose metabolism
ppro00520  Amino sugar and nucleotide sugar metabolism
ppro00521  Streptomycin biosynthesis
ppro00523  Polyketide sugar unit biosynthesis
ppro00525  Acarbose and validamycin biosynthesis
ppro00540  Lipopolysaccharide biosynthesis
ppro00541  O-Antigen nucleotide sugar biosynthesis
ppro00543  Exopolysaccharide biosynthesis
ppro00550  Peptidoglycan biosynthesis
ppro00552  Teichoic acid biosynthesis
ppro00561  Glycerolipid metabolism
ppro00562  Inositol phosphate metabolism
ppro00564  Glycerophospholipid metabolism
ppro00565  Ether lipid metabolism
ppro00592  alpha-Linolenic acid metabolism
ppro00620  Pyruvate metabolism
ppro00622  Xylene degradation
ppro00623  Toluene degradation
ppro00625  Chloroalkane and chloroalkene degradation
ppro00626  Naphthalene degradation
ppro00627  Aminobenzoate degradation
ppro00630  Glyoxylate and dicarboxylate metabolism
ppro00633  Nitrotoluene degradation
ppro00640  Propanoate metabolism
ppro00643  Styrene degradation
ppro00650  Butanoate metabolism
ppro00660  C5-Branched dibasic acid metabolism
ppro00670  One carbon pool by folate
ppro00680  Methane metabolism
ppro00710  Carbon fixation by Calvin cycle
ppro00720  Other carbon fixation pathways
ppro00730  Thiamine metabolism
ppro00740  Riboflavin metabolism
ppro00750  Vitamin B6 metabolism
ppro00760  Nicotinate and nicotinamide metabolism
ppro00770  Pantothenate and CoA biosynthesis
ppro00780  Biotin metabolism
ppro00785  Lipoic acid metabolism
ppro00790  Folate biosynthesis
ppro00791  Atrazine degradation
ppro00860  Porphyrin metabolism
ppro00900  Terpenoid backbone biosynthesis
ppro00907  Pinene, camphor and geraniol degradation
ppro00910  Nitrogen metabolism
ppro00920  Sulfur metabolism
ppro00930  Caprolactam degradation
ppro00946  Degradation of flavonoids
ppro00996  Biosynthesis of various alkaloids
ppro00998  Biosynthesis of various antibiotics
ppro00999  Biosynthesis of various plant secondary metabolites
ppro01040  Biosynthesis of unsaturated fatty acids
ppro01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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