KEGG   PATHWAY: ppud01100
Entry
ppud01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas putida DLL-E4
Class
Pathway map
ppud01100  Metabolic pathways
ppud01100

Module
ppud_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppud01100]
ppud_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppud01100]
ppud_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppud01100]
ppud_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppud01100]
ppud_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppud01100]
ppud_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppud01100]
ppud_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppud01100]
ppud_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppud01100]
ppud_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppud01100]
ppud_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppud01100]
ppud_M00012  Glyoxylate cycle [PATH:ppud01100]
ppud_M00015  Proline biosynthesis, glutamate => proline [PATH:ppud01100]
ppud_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppud01100]
ppud_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppud01100]
ppud_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppud01100]
ppud_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ppud01100]
ppud_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ppud01100]
ppud_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppud01100]
ppud_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppud01100]
ppud_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ppud01100]
ppud_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ppud01100]
ppud_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ppud01100]
ppud_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ppud01100]
ppud_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ppud01100]
ppud_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:ppud01100]
ppud_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppud01100]
ppud_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppud01100]
ppud_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppud01100]
ppud_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppud01100]
ppud_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppud01100]
ppud_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppud01100]
ppud_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppud01100]
ppud_M00063  CMP-KDO biosynthesis [PATH:ppud01100]
ppud_M00082  Fatty acid biosynthesis, initiation [PATH:ppud01100]
ppud_M00083  Fatty acid biosynthesis, elongation [PATH:ppud01100]
ppud_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ppud01100]
ppud_M00087  beta-Oxidation [PATH:ppud01100]
ppud_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppud01100]
ppud_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppud01100]
ppud_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppud01100]
ppud_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ppud01100]
ppud_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppud01100]
ppud_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppud01100]
ppud_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppud01100]
ppud_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppud01100]
ppud_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppud01100]
ppud_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppud01100]
ppud_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ppud01100]
ppud_M00149  Succinate dehydrogenase, prokaryotes [PATH:ppud01100]
ppud_M00151  Cytochrome bc1 complex respiratory unit [PATH:ppud01100]
ppud_M00155  Cytochrome c oxidase, prokaryotes [PATH:ppud01100]
ppud_M00156  Cytochrome c oxidase, cbb3-type [PATH:ppud01100]
ppud_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ppud01100]
ppud_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ppud01100]
ppud_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ppud01100]
ppud_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppud01100]
ppud_M00417  Cytochrome o ubiquinol oxidase [PATH:ppud01100]
ppud_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppud01100]
ppud_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppud01100]
ppud_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:ppud01100]
ppud_M00555  Betaine biosynthesis, choline => betaine [PATH:ppud01100]
ppud_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ppud01100]
ppud_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppud01100]
ppud_M00621  Glycine cleavage system [PATH:ppud01100]
ppud_M00793  dTDP-L-rhamnose biosynthesis [PATH:ppud01100]
ppud_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ppud01100]
ppud_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppud01100]
ppud_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ppud01100]
ppud_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppud01100]
ppud_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppud01100]
ppud_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppud01100]
ppud_M00919  Ectoine degradation, ectoine => aspartate [PATH:ppud01100]
ppud_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ppud01100]
ppud_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:ppud01100]
ppud_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:ppud01100]
ppud_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ppud01100]
ppud_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ppud01100]
ppud_M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate [PATH:ppud01100]
ppud_M00970  Proline degradation, proline => glutamate [PATH:ppud01100]
ppud_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:ppud01100]
Organism
Pseudomonas putida DLL-E4 [GN:ppud]
Related
pathway
ppud00010  Glycolysis / Gluconeogenesis
ppud00020  Citrate cycle (TCA cycle)
ppud00030  Pentose phosphate pathway
ppud00040  Pentose and glucuronate interconversions
ppud00051  Fructose and mannose metabolism
ppud00052  Galactose metabolism
ppud00053  Ascorbate and aldarate metabolism
ppud00061  Fatty acid biosynthesis
ppud00071  Fatty acid degradation
ppud00130  Ubiquinone and other terpenoid-quinone biosynthesis
ppud00190  Oxidative phosphorylation
ppud00220  Arginine biosynthesis
ppud00230  Purine metabolism
ppud00240  Pyrimidine metabolism
ppud00250  Alanine, aspartate and glutamate metabolism
ppud00260  Glycine, serine and threonine metabolism
ppud00261  Monobactam biosynthesis
ppud00270  Cysteine and methionine metabolism
ppud00280  Valine, leucine and isoleucine degradation
ppud00290  Valine, leucine and isoleucine biosynthesis
ppud00300  Lysine biosynthesis
ppud00310  Lysine degradation
ppud00330  Arginine and proline metabolism
ppud00332  Carbapenem biosynthesis
ppud00340  Histidine metabolism
ppud00350  Tyrosine metabolism
ppud00360  Phenylalanine metabolism
ppud00361  Chlorocyclohexane and chlorobenzene degradation
ppud00362  Benzoate degradation
ppud00364  Fluorobenzoate degradation
ppud00380  Tryptophan metabolism
ppud00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ppud00401  Novobiocin biosynthesis
ppud00410  beta-Alanine metabolism
ppud00430  Taurine and hypotaurine metabolism
ppud00440  Phosphonate and phosphinate metabolism
ppud00450  Selenocompound metabolism
ppud00460  Cyanoamino acid metabolism
ppud00470  D-Amino acid metabolism
ppud00480  Glutathione metabolism
ppud00500  Starch and sucrose metabolism
ppud00520  Amino sugar and nucleotide sugar metabolism
ppud00521  Streptomycin biosynthesis
ppud00523  Polyketide sugar unit biosynthesis
ppud00525  Acarbose and validamycin biosynthesis
ppud00540  Lipopolysaccharide biosynthesis
ppud00541  O-Antigen nucleotide sugar biosynthesis
ppud00543  Exopolysaccharide biosynthesis
ppud00550  Peptidoglycan biosynthesis
ppud00552  Teichoic acid biosynthesis
ppud00561  Glycerolipid metabolism
ppud00562  Inositol phosphate metabolism
ppud00564  Glycerophospholipid metabolism
ppud00565  Ether lipid metabolism
ppud00592  alpha-Linolenic acid metabolism
ppud00620  Pyruvate metabolism
ppud00622  Xylene degradation
ppud00623  Toluene degradation
ppud00624  Polycyclic aromatic hydrocarbon degradation
ppud00625  Chloroalkane and chloroalkene degradation
ppud00626  Naphthalene degradation
ppud00627  Aminobenzoate degradation
ppud00630  Glyoxylate and dicarboxylate metabolism
ppud00633  Nitrotoluene degradation
ppud00640  Propanoate metabolism
ppud00642  Ethylbenzene degradation
ppud00643  Styrene degradation
ppud00650  Butanoate metabolism
ppud00660  C5-Branched dibasic acid metabolism
ppud00670  One carbon pool by folate
ppud00680  Methane metabolism
ppud00710  Carbon fixation by Calvin cycle
ppud00720  Other carbon fixation pathways
ppud00730  Thiamine metabolism
ppud00740  Riboflavin metabolism
ppud00750  Vitamin B6 metabolism
ppud00760  Nicotinate and nicotinamide metabolism
ppud00770  Pantothenate and CoA biosynthesis
ppud00780  Biotin metabolism
ppud00785  Lipoic acid metabolism
ppud00790  Folate biosynthesis
ppud00791  Atrazine degradation
ppud00860  Porphyrin metabolism
ppud00900  Terpenoid backbone biosynthesis
ppud00906  Carotenoid biosynthesis
ppud00907  Pinene, camphor and geraniol degradation
ppud00910  Nitrogen metabolism
ppud00920  Sulfur metabolism
ppud00930  Caprolactam degradation
ppud00946  Degradation of flavonoids
ppud00999  Biosynthesis of various plant secondary metabolites
ppud01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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