KEGG   PATHWAY: ppx01100
Entry
ppx01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas putida DOT-T1E
Class
Pathway map
ppx01100  Metabolic pathways
ppx01100

Module
ppx_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppx01100]
ppx_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppx01100]
ppx_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppx01100]
ppx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppx01100]
ppx_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppx01100]
ppx_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppx01100]
ppx_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppx01100]
ppx_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppx01100]
ppx_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppx01100]
ppx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppx01100]
ppx_M00012  Glyoxylate cycle [PATH:ppx01100]
ppx_M00015  Proline biosynthesis, glutamate => proline [PATH:ppx01100]
ppx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppx01100]
ppx_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ppx01100]
ppx_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppx01100]
ppx_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppx01100]
ppx_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ppx01100]
ppx_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ppx01100]
ppx_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppx01100]
ppx_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppx01100]
ppx_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ppx01100]
ppx_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ppx01100]
ppx_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ppx01100]
ppx_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ppx01100]
ppx_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ppx01100]
ppx_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppx01100]
ppx_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppx01100]
ppx_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppx01100]
ppx_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppx01100]
ppx_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppx01100]
ppx_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppx01100]
ppx_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppx01100]
ppx_M00063  CMP-KDO biosynthesis [PATH:ppx01100]
ppx_M00082  Fatty acid biosynthesis, initiation [PATH:ppx01100]
ppx_M00083  Fatty acid biosynthesis, elongation [PATH:ppx01100]
ppx_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ppx01100]
ppx_M00087  beta-Oxidation [PATH:ppx01100]
ppx_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppx01100]
ppx_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppx01100]
ppx_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppx01100]
ppx_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ppx01100]
ppx_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppx01100]
ppx_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppx01100]
ppx_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppx01100]
ppx_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppx01100]
ppx_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppx01100]
ppx_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppx01100]
ppx_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ppx01100]
ppx_M00149  Succinate dehydrogenase, prokaryotes [PATH:ppx01100]
ppx_M00151  Cytochrome bc1 complex respiratory unit [PATH:ppx01100]
ppx_M00155  Cytochrome c oxidase, prokaryotes [PATH:ppx01100]
ppx_M00156  Cytochrome c oxidase, cbb3-type [PATH:ppx01100]
ppx_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ppx01100]
ppx_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ppx01100]
ppx_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ppx01100]
ppx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppx01100]
ppx_M00417  Cytochrome o ubiquinol oxidase [PATH:ppx01100]
ppx_M00419  Cymene degradation, p-cymene => p-cumate [PATH:ppx01100]
ppx_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppx01100]
ppx_M00539  Cumate degradation, p-cumate => 2-oxopent-4-enoate + 2-methylpropanoate [PATH:ppx01100]
ppx_M00547  Benzene/toluene degradation, benzene => catechol / toluene => 3-methylcatechol [PATH:ppx01100]
ppx_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppx01100]
ppx_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:ppx01100]
ppx_M00555  Betaine biosynthesis, choline => betaine [PATH:ppx01100]
ppx_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ppx01100]
ppx_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppx01100]
ppx_M00621  Glycine cleavage system [PATH:ppx01100]
ppx_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:ppx01100]
ppx_M00793  dTDP-L-rhamnose biosynthesis [PATH:ppx01100]
ppx_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ppx01100]
ppx_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppx01100]
ppx_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ppx01100]
ppx_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppx01100]
ppx_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppx01100]
ppx_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppx01100]
ppx_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ppx01100]
ppx_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:ppx01100]
ppx_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:ppx01100]
ppx_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ppx01100]
ppx_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ppx01100]
ppx_M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate [PATH:ppx01100]
ppx_M00970  Proline degradation, proline => glutamate [PATH:ppx01100]
ppx_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:ppx01100]
Organism
Pseudomonas putida DOT-T1E [GN:ppx]
Related
pathway
ppx00010  Glycolysis / Gluconeogenesis
ppx00020  Citrate cycle (TCA cycle)
ppx00030  Pentose phosphate pathway
ppx00040  Pentose and glucuronate interconversions
ppx00051  Fructose and mannose metabolism
ppx00052  Galactose metabolism
ppx00053  Ascorbate and aldarate metabolism
ppx00061  Fatty acid biosynthesis
ppx00071  Fatty acid degradation
ppx00130  Ubiquinone and other terpenoid-quinone biosynthesis
ppx00190  Oxidative phosphorylation
ppx00220  Arginine biosynthesis
ppx00230  Purine metabolism
ppx00240  Pyrimidine metabolism
ppx00250  Alanine, aspartate and glutamate metabolism
ppx00260  Glycine, serine and threonine metabolism
ppx00261  Monobactam biosynthesis
ppx00270  Cysteine and methionine metabolism
ppx00280  Valine, leucine and isoleucine degradation
ppx00290  Valine, leucine and isoleucine biosynthesis
ppx00300  Lysine biosynthesis
ppx00310  Lysine degradation
ppx00330  Arginine and proline metabolism
ppx00332  Carbapenem biosynthesis
ppx00340  Histidine metabolism
ppx00350  Tyrosine metabolism
ppx00360  Phenylalanine metabolism
ppx00361  Chlorocyclohexane and chlorobenzene degradation
ppx00362  Benzoate degradation
ppx00364  Fluorobenzoate degradation
ppx00380  Tryptophan metabolism
ppx00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ppx00401  Novobiocin biosynthesis
ppx00410  beta-Alanine metabolism
ppx00430  Taurine and hypotaurine metabolism
ppx00440  Phosphonate and phosphinate metabolism
ppx00450  Selenocompound metabolism
ppx00460  Cyanoamino acid metabolism
ppx00470  D-Amino acid metabolism
ppx00480  Glutathione metabolism
ppx00500  Starch and sucrose metabolism
ppx00520  Amino sugar and nucleotide sugar metabolism
ppx00521  Streptomycin biosynthesis
ppx00523  Polyketide sugar unit biosynthesis
ppx00525  Acarbose and validamycin biosynthesis
ppx00540  Lipopolysaccharide biosynthesis
ppx00541  O-Antigen nucleotide sugar biosynthesis
ppx00543  Exopolysaccharide biosynthesis
ppx00550  Peptidoglycan biosynthesis
ppx00552  Teichoic acid biosynthesis
ppx00561  Glycerolipid metabolism
ppx00562  Inositol phosphate metabolism
ppx00564  Glycerophospholipid metabolism
ppx00592  alpha-Linolenic acid metabolism
ppx00620  Pyruvate metabolism
ppx00621  Dioxin degradation
ppx00622  Xylene degradation
ppx00623  Toluene degradation
ppx00624  Polycyclic aromatic hydrocarbon degradation
ppx00625  Chloroalkane and chloroalkene degradation
ppx00626  Naphthalene degradation
ppx00627  Aminobenzoate degradation
ppx00630  Glyoxylate and dicarboxylate metabolism
ppx00633  Nitrotoluene degradation
ppx00640  Propanoate metabolism
ppx00643  Styrene degradation
ppx00650  Butanoate metabolism
ppx00660  C5-Branched dibasic acid metabolism
ppx00670  One carbon pool by folate
ppx00680  Methane metabolism
ppx00710  Carbon fixation by Calvin cycle
ppx00720  Other carbon fixation pathways
ppx00730  Thiamine metabolism
ppx00740  Riboflavin metabolism
ppx00750  Vitamin B6 metabolism
ppx00760  Nicotinate and nicotinamide metabolism
ppx00770  Pantothenate and CoA biosynthesis
ppx00780  Biotin metabolism
ppx00785  Lipoic acid metabolism
ppx00790  Folate biosynthesis
ppx00791  Atrazine degradation
ppx00860  Porphyrin metabolism
ppx00900  Terpenoid backbone biosynthesis
ppx00906  Carotenoid biosynthesis
ppx00907  Pinene, camphor and geraniol degradation
ppx00910  Nitrogen metabolism
ppx00920  Sulfur metabolism
ppx00930  Caprolactam degradation
ppx00946  Degradation of flavonoids
ppx00999  Biosynthesis of various plant secondary metabolites
ppx01040  Biosynthesis of unsaturated fatty acids
ppx01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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