PATHWAY: prot01100 Help Entry prot01100                   Pathway                                 Name Metabolic pathways - Proteus sp. CD3 Class BRITE hierarchy Pathway map prot01100   Metabolic pathways Module prot_M00002   Glycolysis, core module involving three-carbon compounds [PATH:prot01100] prot_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:prot01100] prot_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:prot01100] prot_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:prot01100] prot_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:prot01100] prot_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:prot01100] prot_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:prot01100] prot_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:prot01100] prot_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:prot01100] prot_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:prot01100] prot_M00012   Glyoxylate cycle [PATH:prot01100] prot_M00015   Proline biosynthesis, glutamate => proline [PATH:prot01100] prot_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:prot01100] prot_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:prot01100] prot_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:prot01100] prot_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:prot01100] prot_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:prot01100] prot_M00021   Cysteine biosynthesis, serine => cysteine [PATH:prot01100] prot_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:prot01100] prot_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:prot01100] prot_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:prot01100] prot_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:prot01100] prot_M00026   Histidine biosynthesis, PRPP => histidine [PATH:prot01100] prot_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:prot01100] prot_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:prot01100] prot_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:prot01100] prot_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:prot01100] prot_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:prot01100] prot_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:prot01100] prot_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:prot01100] prot_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:prot01100] prot_M00063   CMP-KDO biosynthesis [PATH:prot01100] prot_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:prot01100] prot_M00082   Fatty acid biosynthesis, initiation [PATH:prot01100] prot_M00083   Fatty acid biosynthesis, elongation [PATH:prot01100] prot_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:prot01100] prot_M00087   beta-Oxidation [PATH:prot01100] prot_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:prot01100] prot_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:prot01100] prot_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:prot01100] prot_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:prot01100] prot_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:prot01100] prot_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:prot01100] prot_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:prot01100] prot_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:prot01100] prot_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:prot01100] prot_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:prot01100] prot_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:prot01100] prot_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:prot01100] prot_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:prot01100] prot_M00140   C1-unit interconversion, prokaryotes [PATH:prot01100] prot_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:prot01100] prot_M00149   Succinate dehydrogenase, prokaryotes [PATH:prot01100] prot_M00150   Fumarate reductase, prokaryotes [PATH:prot01100] prot_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:prot01100] prot_M00168   CAM (Crassulacean acid metabolism), dark [PATH:prot01100] prot_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:prot01100] prot_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:prot01100] prot_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:prot01100] prot_M00417   Cytochrome o ubiquinol oxidase [PATH:prot01100] prot_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:prot01100] prot_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:prot01100] prot_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:prot01100] prot_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:prot01100] prot_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:prot01100] prot_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:prot01100] prot_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:prot01100] prot_M00621   Glycine cleavage system [PATH:prot01100] prot_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:prot01100] prot_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:prot01100] prot_M00844   Arginine biosynthesis, ornithine => arginine [PATH:prot01100] prot_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:prot01100] prot_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:prot01100] prot_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:prot01100] prot_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:prot01100] prot_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:prot01100] prot_M00970   Proline degradation, proline => glutamate [PATH:prot01100] Organism Proteus sp. CD3 [GN:prot] Related pathway prot00010   Glycolysis / Gluconeogenesis prot00020   Citrate cycle (TCA cycle) prot00030   Pentose phosphate pathway prot00040   Pentose and glucuronate interconversions prot00051   Fructose and mannose metabolism prot00052   Galactose metabolism prot00053   Ascorbate and aldarate metabolism prot00061   Fatty acid biosynthesis prot00071   Fatty acid degradation prot00130   Ubiquinone and other terpenoid-quinone biosynthesis prot00190   Oxidative phosphorylation prot00220   Arginine biosynthesis prot00230   Purine metabolism prot00240   Pyrimidine metabolism prot00250   Alanine, aspartate and glutamate metabolism prot00260   Glycine, serine and threonine metabolism prot00261   Monobactam biosynthesis prot00270   Cysteine and methionine metabolism prot00280   Valine, leucine and isoleucine degradation prot00290   Valine, leucine and isoleucine biosynthesis prot00300   Lysine biosynthesis prot00310   Lysine degradation prot00330   Arginine and proline metabolism prot00332   Carbapenem biosynthesis prot00340   Histidine metabolism prot00350   Tyrosine metabolism prot00360   Phenylalanine metabolism prot00362   Benzoate degradation prot00380   Tryptophan metabolism prot00400   Phenylalanine, tyrosine and tryptophan biosynthesis prot00401   Novobiocin biosynthesis prot00410   beta-Alanine metabolism prot00430   Taurine and hypotaurine metabolism prot00450   Selenocompound metabolism prot00460   Cyanoamino acid metabolism prot00470   D-Amino acid metabolism prot00480   Glutathione metabolism prot00500   Starch and sucrose metabolism prot00520   Amino sugar and nucleotide sugar metabolism prot00521   Streptomycin biosynthesis prot00523   Polyketide sugar unit biosynthesis prot00525   Acarbose and validamycin biosynthesis prot00540   Lipopolysaccharide biosynthesis prot00541   O-Antigen nucleotide sugar biosynthesis prot00542   O-Antigen repeat unit biosynthesis prot00543   Exopolysaccharide biosynthesis prot00550   Peptidoglycan biosynthesis prot00552   Teichoic acid biosynthesis prot00561   Glycerolipid metabolism prot00562   Inositol phosphate metabolism prot00564   Glycerophospholipid metabolism prot00565   Ether lipid metabolism prot00592   alpha-Linolenic acid metabolism prot00620   Pyruvate metabolism prot00625   Chloroalkane and chloroalkene degradation prot00626   Naphthalene degradation prot00627   Aminobenzoate degradation prot00630   Glyoxylate and dicarboxylate metabolism prot00640   Propanoate metabolism prot00650   Butanoate metabolism prot00660   C5-Branched dibasic acid metabolism prot00670   One carbon pool by folate prot00680   Methane metabolism prot00710   Carbon fixation by Calvin cycle prot00720   Other carbon fixation pathways prot00730   Thiamine metabolism prot00740   Riboflavin metabolism prot00750   Vitamin B6 metabolism prot00760   Nicotinate and nicotinamide metabolism prot00770   Pantothenate and CoA biosynthesis prot00780   Biotin metabolism prot00785   Lipoic acid metabolism prot00790   Folate biosynthesis prot00860   Porphyrin metabolism prot00900   Terpenoid backbone biosynthesis prot00907   Pinene, camphor and geraniol degradation prot00910   Nitrogen metabolism prot00920   Sulfur metabolism prot00930   Caprolactam degradation prot00999   Biosynthesis of various plant secondary metabolites prot01040   Biosynthesis of unsaturated fatty acids prot01057   Biosynthesis of type II polyketide products KO pathway ko01100     LinkDB All DBs

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