PATHWAY: psej01100 Help Entry psej01100                   Pathway                                 Name Metabolic pathways - Pseudomonas sediminis Class BRITE hierarchy Pathway map psej01100   Metabolic pathways Module psej_M00002   Glycolysis, core module involving three-carbon compounds [PATH:psej01100] psej_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:psej01100] psej_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:psej01100] psej_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:psej01100] psej_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:psej01100] psej_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:psej01100] psej_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:psej01100] psej_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:psej01100] psej_M00015   Proline biosynthesis, glutamate => proline [PATH:psej01100] psej_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:psej01100] psej_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:psej01100] psej_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:psej01100] psej_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:psej01100] psej_M00021   Cysteine biosynthesis, serine => cysteine [PATH:psej01100] psej_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:psej01100] psej_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:psej01100] psej_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:psej01100] psej_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:psej01100] psej_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:psej01100] psej_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:psej01100] psej_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psej01100] psej_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psej01100] psej_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psej01100] psej_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:psej01100] psej_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psej01100] psej_M00063   CMP-KDO biosynthesis [PATH:psej01100] psej_M00082   Fatty acid biosynthesis, initiation [PATH:psej01100] psej_M00083   Fatty acid biosynthesis, elongation [PATH:psej01100] psej_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:psej01100] psej_M00087   beta-Oxidation [PATH:psej01100] psej_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:psej01100] psej_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:psej01100] psej_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:psej01100] psej_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:psej01100] psej_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:psej01100] psej_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:psej01100] psej_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:psej01100] psej_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:psej01100] psej_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:psej01100] psej_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:psej01100] psej_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:psej01100] psej_M00149   Succinate dehydrogenase, prokaryotes [PATH:psej01100] psej_M00151   Cytochrome bc1 complex respiratory unit [PATH:psej01100] psej_M00155   Cytochrome c oxidase, prokaryotes [PATH:psej01100] psej_M00156   Cytochrome c oxidase, cbb3-type [PATH:psej01100] psej_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:psej01100] psej_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:psej01100] psej_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:psej01100] psej_M00417   Cytochrome o ubiquinol oxidase [PATH:psej01100] psej_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:psej01100] psej_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:psej01100] psej_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:psej01100] psej_M00555   Betaine biosynthesis, choline => betaine [PATH:psej01100] psej_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:psej01100] psej_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:psej01100] psej_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:psej01100] psej_M00621   Glycine cleavage system [PATH:psej01100] psej_M00793   dTDP-L-rhamnose biosynthesis [PATH:psej01100] psej_M00844   Arginine biosynthesis, ornithine => arginine [PATH:psej01100] psej_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:psej01100] psej_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:psej01100] psej_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:psej01100] psej_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:psej01100] psej_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:psej01100] psej_M00919   Ectoine degradation, ectoine => aspartate [PATH:psej01100] psej_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:psej01100] psej_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:psej01100] psej_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:psej01100] psej_M00970   Proline degradation, proline => glutamate [PATH:psej01100] psej_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:psej01100] Organism Pseudomonas sediminis [GN:psej] Related pathway psej00010   Glycolysis / Gluconeogenesis psej00020   Citrate cycle (TCA cycle) psej00030   Pentose phosphate pathway psej00040   Pentose and glucuronate interconversions psej00051   Fructose and mannose metabolism psej00052   Galactose metabolism psej00053   Ascorbate and aldarate metabolism psej00061   Fatty acid biosynthesis psej00071   Fatty acid degradation psej00130   Ubiquinone and other terpenoid-quinone biosynthesis psej00190   Oxidative phosphorylation psej00220   Arginine biosynthesis psej00230   Purine metabolism psej00240   Pyrimidine metabolism psej00250   Alanine, aspartate and glutamate metabolism psej00260   Glycine, serine and threonine metabolism psej00261   Monobactam biosynthesis psej00270   Cysteine and methionine metabolism psej00280   Valine, leucine and isoleucine degradation psej00290   Valine, leucine and isoleucine biosynthesis psej00300   Lysine biosynthesis psej00310   Lysine degradation psej00330   Arginine and proline metabolism psej00332   Carbapenem biosynthesis psej00340   Histidine metabolism psej00350   Tyrosine metabolism psej00360   Phenylalanine metabolism psej00362   Benzoate degradation psej00380   Tryptophan metabolism psej00400   Phenylalanine, tyrosine and tryptophan biosynthesis psej00401   Novobiocin biosynthesis psej00410   beta-Alanine metabolism psej00430   Taurine and hypotaurine metabolism psej00440   Phosphonate and phosphinate metabolism psej00450   Selenocompound metabolism psej00460   Cyanoamino acid metabolism psej00470   D-Amino acid metabolism psej00480   Glutathione metabolism psej00500   Starch and sucrose metabolism psej00520   Amino sugar and nucleotide sugar metabolism psej00521   Streptomycin biosynthesis psej00523   Polyketide sugar unit biosynthesis psej00525   Acarbose and validamycin biosynthesis psej00540   Lipopolysaccharide biosynthesis psej00541   O-Antigen nucleotide sugar biosynthesis psej00543   Exopolysaccharide biosynthesis psej00550   Peptidoglycan biosynthesis psej00552   Teichoic acid biosynthesis psej00561   Glycerolipid metabolism psej00562   Inositol phosphate metabolism psej00564   Glycerophospholipid metabolism psej00565   Ether lipid metabolism psej00592   alpha-Linolenic acid metabolism psej00620   Pyruvate metabolism psej00625   Chloroalkane and chloroalkene degradation psej00626   Naphthalene degradation psej00627   Aminobenzoate degradation psej00630   Glyoxylate and dicarboxylate metabolism psej00633   Nitrotoluene degradation psej00640   Propanoate metabolism psej00643   Styrene degradation psej00650   Butanoate metabolism psej00660   C5-Branched dibasic acid metabolism psej00670   One carbon pool by folate psej00680   Methane metabolism psej00710   Carbon fixation by Calvin cycle psej00720   Other carbon fixation pathways psej00730   Thiamine metabolism psej00740   Riboflavin metabolism psej00750   Vitamin B6 metabolism psej00760   Nicotinate and nicotinamide metabolism psej00770   Pantothenate and CoA biosynthesis psej00780   Biotin metabolism psej00785   Lipoic acid metabolism psej00790   Folate biosynthesis psej00791   Atrazine degradation psej00860   Porphyrin metabolism psej00900   Terpenoid backbone biosynthesis psej00903   Limonene degradation psej00907   Pinene, camphor and geraniol degradation psej00910   Nitrogen metabolism psej00920   Sulfur metabolism psej00930   Caprolactam degradation psej00946   Degradation of flavonoids psej00999   Biosynthesis of various plant secondary metabolites psej01040   Biosynthesis of unsaturated fatty acids psej01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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