KEGG   PATHWAY: psem01100
Entry
psem01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas sp. MRSN12121
Class
Pathway map
psem01100  Metabolic pathways
psem01100

Module
psem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:psem01100]
psem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:psem01100]
psem_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:psem01100]
psem_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:psem01100]
psem_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:psem01100]
psem_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:psem01100]
psem_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:psem01100]
psem_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:psem01100]
psem_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:psem01100]
psem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:psem01100]
psem_M00015  Proline biosynthesis, glutamate => proline [PATH:psem01100]
psem_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:psem01100]
psem_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:psem01100]
psem_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:psem01100]
psem_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:psem01100]
psem_M00021  Cysteine biosynthesis, serine => cysteine [PATH:psem01100]
psem_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:psem01100]
psem_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:psem01100]
psem_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:psem01100]
psem_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:psem01100]
psem_M00035  Methionine degradation [PATH:psem01100]
psem_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:psem01100]
psem_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:psem01100]
psem_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:psem01100]
psem_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:psem01100]
psem_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:psem01100]
psem_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psem01100]
psem_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psem01100]
psem_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psem01100]
psem_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:psem01100]
psem_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psem01100]
psem_M00063  CMP-KDO biosynthesis [PATH:psem01100]
psem_M00082  Fatty acid biosynthesis, initiation [PATH:psem01100]
psem_M00083  Fatty acid biosynthesis, elongation [PATH:psem01100]
psem_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:psem01100]
psem_M00087  beta-Oxidation [PATH:psem01100]
psem_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:psem01100]
psem_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:psem01100]
psem_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:psem01100]
psem_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:psem01100]
psem_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:psem01100]
psem_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:psem01100]
psem_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:psem01100]
psem_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:psem01100]
psem_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:psem01100]
psem_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:psem01100]
psem_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:psem01100]
psem_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:psem01100]
psem_M00149  Succinate dehydrogenase, prokaryotes [PATH:psem01100]
psem_M00151  Cytochrome bc1 complex respiratory unit [PATH:psem01100]
psem_M00155  Cytochrome c oxidase, prokaryotes [PATH:psem01100]
psem_M00156  Cytochrome c oxidase, cbb3-type [PATH:psem01100]
psem_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:psem01100]
psem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:psem01100]
psem_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:psem01100]
psem_M00417  Cytochrome o ubiquinol oxidase [PATH:psem01100]
psem_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:psem01100]
psem_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:psem01100]
psem_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:psem01100]
psem_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:psem01100]
psem_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:psem01100]
psem_M00555  Betaine biosynthesis, choline => betaine [PATH:psem01100]
psem_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:psem01100]
psem_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:psem01100]
psem_M00621  Glycine cleavage system [PATH:psem01100]
psem_M00637  Anthranilate degradation, anthranilate => catechol [PATH:psem01100]
psem_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:psem01100]
psem_M00790  Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:psem01100]
psem_M00793  dTDP-L-rhamnose biosynthesis [PATH:psem01100]
psem_M00844  Arginine biosynthesis, ornithine => arginine [PATH:psem01100]
psem_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:psem01100]
psem_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:psem01100]
psem_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:psem01100]
psem_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:psem01100]
psem_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:psem01100]
psem_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:psem01100]
psem_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:psem01100]
psem_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:psem01100]
psem_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:psem01100]
psem_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:psem01100]
psem_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:psem01100]
psem_M00970  Proline degradation, proline => glutamate [PATH:psem01100]
psem_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:psem01100]
Organism
Pseudomonas sp. MRSN12121 [GN:psem]
Related
pathway
psem00010  Glycolysis / Gluconeogenesis
psem00020  Citrate cycle (TCA cycle)
psem00030  Pentose phosphate pathway
psem00040  Pentose and glucuronate interconversions
psem00051  Fructose and mannose metabolism
psem00052  Galactose metabolism
psem00053  Ascorbate and aldarate metabolism
psem00061  Fatty acid biosynthesis
psem00071  Fatty acid degradation
psem00130  Ubiquinone and other terpenoid-quinone biosynthesis
psem00190  Oxidative phosphorylation
psem00220  Arginine biosynthesis
psem00230  Purine metabolism
psem00240  Pyrimidine metabolism
psem00250  Alanine, aspartate and glutamate metabolism
psem00260  Glycine, serine and threonine metabolism
psem00261  Monobactam biosynthesis
psem00270  Cysteine and methionine metabolism
psem00280  Valine, leucine and isoleucine degradation
psem00290  Valine, leucine and isoleucine biosynthesis
psem00300  Lysine biosynthesis
psem00310  Lysine degradation
psem00330  Arginine and proline metabolism
psem00332  Carbapenem biosynthesis
psem00340  Histidine metabolism
psem00350  Tyrosine metabolism
psem00360  Phenylalanine metabolism
psem00361  Chlorocyclohexane and chlorobenzene degradation
psem00362  Benzoate degradation
psem00364  Fluorobenzoate degradation
psem00380  Tryptophan metabolism
psem00400  Phenylalanine, tyrosine and tryptophan biosynthesis
psem00401  Novobiocin biosynthesis
psem00404  Staurosporine biosynthesis
psem00410  beta-Alanine metabolism
psem00430  Taurine and hypotaurine metabolism
psem00440  Phosphonate and phosphinate metabolism
psem00450  Selenocompound metabolism
psem00460  Cyanoamino acid metabolism
psem00470  D-Amino acid metabolism
psem00480  Glutathione metabolism
psem00500  Starch and sucrose metabolism
psem00520  Amino sugar and nucleotide sugar metabolism
psem00521  Streptomycin biosynthesis
psem00523  Polyketide sugar unit biosynthesis
psem00525  Acarbose and validamycin biosynthesis
psem00540  Lipopolysaccharide biosynthesis
psem00541  O-Antigen nucleotide sugar biosynthesis
psem00543  Exopolysaccharide biosynthesis
psem00550  Peptidoglycan biosynthesis
psem00552  Teichoic acid biosynthesis
psem00561  Glycerolipid metabolism
psem00562  Inositol phosphate metabolism
psem00564  Glycerophospholipid metabolism
psem00592  alpha-Linolenic acid metabolism
psem00620  Pyruvate metabolism
psem00622  Xylene degradation
psem00623  Toluene degradation
psem00625  Chloroalkane and chloroalkene degradation
psem00626  Naphthalene degradation
psem00627  Aminobenzoate degradation
psem00630  Glyoxylate and dicarboxylate metabolism
psem00633  Nitrotoluene degradation
psem00640  Propanoate metabolism
psem00643  Styrene degradation
psem00650  Butanoate metabolism
psem00660  C5-Branched dibasic acid metabolism
psem00670  One carbon pool by folate
psem00680  Methane metabolism
psem00710  Carbon fixation by Calvin cycle
psem00720  Other carbon fixation pathways
psem00730  Thiamine metabolism
psem00740  Riboflavin metabolism
psem00750  Vitamin B6 metabolism
psem00760  Nicotinate and nicotinamide metabolism
psem00770  Pantothenate and CoA biosynthesis
psem00780  Biotin metabolism
psem00785  Lipoic acid metabolism
psem00790  Folate biosynthesis
psem00791  Atrazine degradation
psem00860  Porphyrin metabolism
psem00900  Terpenoid backbone biosynthesis
psem00906  Carotenoid biosynthesis
psem00907  Pinene, camphor and geraniol degradation
psem00910  Nitrogen metabolism
psem00920  Sulfur metabolism
psem00930  Caprolactam degradation
psem00946  Degradation of flavonoids
psem00996  Biosynthesis of various alkaloids
psem00997  Biosynthesis of various other secondary metabolites
psem00999  Biosynthesis of various plant secondary metabolites
psem01040  Biosynthesis of unsaturated fatty acids
psem01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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