PATHWAY: psii01100 Help Entry psii01100                   Pathway                                 Name Metabolic pathways - Pseudomonas siliginis Class BRITE hierarchy Pathway map psii01100   Metabolic pathways Module psii_M00002   Glycolysis, core module involving three-carbon compounds [PATH:psii01100] psii_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:psii01100] psii_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:psii01100] psii_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:psii01100] psii_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:psii01100] psii_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:psii01100] psii_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:psii01100] psii_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:psii01100] psii_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:psii01100] psii_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:psii01100] psii_M00015   Proline biosynthesis, glutamate => proline [PATH:psii01100] psii_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:psii01100] psii_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:psii01100] psii_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:psii01100] psii_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:psii01100] psii_M00021   Cysteine biosynthesis, serine => cysteine [PATH:psii01100] psii_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:psii01100] psii_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:psii01100] psii_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:psii01100] psii_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:psii01100] psii_M00034   Methionine salvage pathway [PATH:psii01100] psii_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:psii01100] psii_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:psii01100] psii_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:psii01100] psii_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:psii01100] psii_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:psii01100] psii_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psii01100] psii_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psii01100] psii_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psii01100] psii_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:psii01100] psii_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psii01100] psii_M00063   CMP-KDO biosynthesis [PATH:psii01100] psii_M00082   Fatty acid biosynthesis, initiation [PATH:psii01100] psii_M00083   Fatty acid biosynthesis, elongation [PATH:psii01100] psii_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:psii01100] psii_M00087   beta-Oxidation [PATH:psii01100] psii_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:psii01100] psii_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:psii01100] psii_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:psii01100] psii_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:psii01100] psii_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:psii01100] psii_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:psii01100] psii_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:psii01100] psii_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:psii01100] psii_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:psii01100] psii_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:psii01100] psii_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:psii01100] psii_M00149   Succinate dehydrogenase, prokaryotes [PATH:psii01100] psii_M00151   Cytochrome bc1 complex respiratory unit [PATH:psii01100] psii_M00155   Cytochrome c oxidase, prokaryotes [PATH:psii01100] psii_M00156   Cytochrome c oxidase, cbb3-type [PATH:psii01100] psii_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:psii01100] psii_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:psii01100] psii_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:psii01100] psii_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:psii01100] psii_M00417   Cytochrome o ubiquinol oxidase [PATH:psii01100] psii_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:psii01100] psii_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:psii01100] psii_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:psii01100] psii_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:psii01100] psii_M00555   Betaine biosynthesis, choline => betaine [PATH:psii01100] psii_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:psii01100] psii_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:psii01100] psii_M00621   Glycine cleavage system [PATH:psii01100] psii_M00793   dTDP-L-rhamnose biosynthesis [PATH:psii01100] psii_M00844   Arginine biosynthesis, ornithine => arginine [PATH:psii01100] psii_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:psii01100] psii_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:psii01100] psii_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:psii01100] psii_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:psii01100] psii_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:psii01100] psii_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:psii01100] psii_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:psii01100] psii_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:psii01100] psii_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:psii01100] psii_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:psii01100] psii_M00970   Proline degradation, proline => glutamate [PATH:psii01100] psii_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:psii01100] Organism Pseudomonas siliginis [GN:psii] Related pathway psii00010   Glycolysis / Gluconeogenesis psii00020   Citrate cycle (TCA cycle) psii00030   Pentose phosphate pathway psii00040   Pentose and glucuronate interconversions psii00051   Fructose and mannose metabolism psii00052   Galactose metabolism psii00053   Ascorbate and aldarate metabolism psii00061   Fatty acid biosynthesis psii00071   Fatty acid degradation psii00130   Ubiquinone and other terpenoid-quinone biosynthesis psii00190   Oxidative phosphorylation psii00220   Arginine biosynthesis psii00230   Purine metabolism psii00240   Pyrimidine metabolism psii00250   Alanine, aspartate and glutamate metabolism psii00260   Glycine, serine and threonine metabolism psii00261   Monobactam biosynthesis psii00270   Cysteine and methionine metabolism psii00280   Valine, leucine and isoleucine degradation psii00290   Valine, leucine and isoleucine biosynthesis psii00300   Lysine biosynthesis psii00310   Lysine degradation psii00330   Arginine and proline metabolism psii00332   Carbapenem biosynthesis psii00340   Histidine metabolism psii00350   Tyrosine metabolism psii00360   Phenylalanine metabolism psii00362   Benzoate degradation psii00380   Tryptophan metabolism psii00400   Phenylalanine, tyrosine and tryptophan biosynthesis psii00401   Novobiocin biosynthesis psii00410   beta-Alanine metabolism psii00430   Taurine and hypotaurine metabolism psii00440   Phosphonate and phosphinate metabolism psii00450   Selenocompound metabolism psii00460   Cyanoamino acid metabolism psii00470   D-Amino acid metabolism psii00480   Glutathione metabolism psii00500   Starch and sucrose metabolism psii00520   Amino sugar and nucleotide sugar metabolism psii00521   Streptomycin biosynthesis psii00523   Polyketide sugar unit biosynthesis psii00525   Acarbose and validamycin biosynthesis psii00540   Lipopolysaccharide biosynthesis psii00541   O-Antigen nucleotide sugar biosynthesis psii00543   Exopolysaccharide biosynthesis psii00550   Peptidoglycan biosynthesis psii00552   Teichoic acid biosynthesis psii00561   Glycerolipid metabolism psii00562   Inositol phosphate metabolism psii00564   Glycerophospholipid metabolism psii00592   alpha-Linolenic acid metabolism psii00620   Pyruvate metabolism psii00625   Chloroalkane and chloroalkene degradation psii00626   Naphthalene degradation psii00627   Aminobenzoate degradation psii00630   Glyoxylate and dicarboxylate metabolism psii00633   Nitrotoluene degradation psii00640   Propanoate metabolism psii00643   Styrene degradation psii00650   Butanoate metabolism psii00660   C5-Branched dibasic acid metabolism psii00670   One carbon pool by folate psii00680   Methane metabolism psii00710   Carbon fixation by Calvin cycle psii00720   Other carbon fixation pathways psii00730   Thiamine metabolism psii00740   Riboflavin metabolism psii00750   Vitamin B6 metabolism psii00760   Nicotinate and nicotinamide metabolism psii00770   Pantothenate and CoA biosynthesis psii00780   Biotin metabolism psii00785   Lipoic acid metabolism psii00790   Folate biosynthesis psii00791   Atrazine degradation psii00860   Porphyrin metabolism psii00900   Terpenoid backbone biosynthesis psii00903   Limonene degradation psii00907   Pinene, camphor and geraniol degradation psii00910   Nitrogen metabolism psii00920   Sulfur metabolism psii00930   Caprolactam degradation psii00946   Degradation of flavonoids psii00997   Biosynthesis of various other secondary metabolites psii00998   Biosynthesis of various antibiotics psii00999   Biosynthesis of various plant secondary metabolites psii01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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