PATHWAY: psim01100 Help Entry psim01100                   Pathway                                 Name Metabolic pathways - Pimelobacter simplex Class BRITE hierarchy Pathway map psim01100   Metabolic pathways Module psim_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:psim01100] psim_M00002   Glycolysis, core module involving three-carbon compounds [PATH:psim01100] psim_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:psim01100] psim_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:psim01100] psim_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:psim01100] psim_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:psim01100] psim_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:psim01100] psim_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:psim01100] psim_M00015   Proline biosynthesis, glutamate => proline [PATH:psim01100] psim_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:psim01100] psim_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:psim01100] psim_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:psim01100] psim_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:psim01100] psim_M00026   Histidine biosynthesis, PRPP => histidine [PATH:psim01100] psim_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:psim01100] psim_M00035   Methionine degradation [PATH:psim01100] psim_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psim01100] psim_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psim01100] psim_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psim01100] psim_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:psim01100] psim_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psim01100] psim_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:psim01100] psim_M00087   beta-Oxidation [PATH:psim01100] psim_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:psim01100] psim_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:psim01100] psim_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:psim01100] psim_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:psim01100] psim_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:psim01100] psim_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:psim01100] psim_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:psim01100] psim_M00151   Cytochrome bc1 complex respiratory unit [PATH:psim01100] psim_M00155   Cytochrome c oxidase, prokaryotes [PATH:psim01100] psim_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:psim01100] psim_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:psim01100] psim_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:psim01100] psim_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:psim01100] psim_M00621   Glycine cleavage system [PATH:psim01100] psim_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:psim01100] psim_M00793   dTDP-L-rhamnose biosynthesis [PATH:psim01100] psim_M00844   Arginine biosynthesis, ornithine => arginine [PATH:psim01100] psim_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:psim01100] psim_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:psim01100] psim_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:psim01100] psim_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:psim01100] psim_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:psim01100] psim_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:psim01100] psim_M00970   Proline degradation, proline => glutamate [PATH:psim01100] psim_M00972   Proline metabolism [PATH:psim01100] Organism Pimelobacter simplex [GN:psim] Related pathway psim00010   Glycolysis / Gluconeogenesis psim00020   Citrate cycle (TCA cycle) psim00030   Pentose phosphate pathway psim00040   Pentose and glucuronate interconversions psim00051   Fructose and mannose metabolism psim00052   Galactose metabolism psim00053   Ascorbate and aldarate metabolism psim00061   Fatty acid biosynthesis psim00071   Fatty acid degradation psim00100   Steroid biosynthesis psim00121   Secondary bile acid biosynthesis psim00130   Ubiquinone and other terpenoid-quinone biosynthesis psim00190   Oxidative phosphorylation psim00220   Arginine biosynthesis psim00230   Purine metabolism psim00240   Pyrimidine metabolism psim00250   Alanine, aspartate and glutamate metabolism psim00260   Glycine, serine and threonine metabolism psim00261   Monobactam biosynthesis psim00270   Cysteine and methionine metabolism psim00280   Valine, leucine and isoleucine degradation psim00290   Valine, leucine and isoleucine biosynthesis psim00300   Lysine biosynthesis psim00310   Lysine degradation psim00330   Arginine and proline metabolism psim00332   Carbapenem biosynthesis psim00340   Histidine metabolism psim00350   Tyrosine metabolism psim00360   Phenylalanine metabolism psim00361   Chlorocyclohexane and chlorobenzene degradation psim00362   Benzoate degradation psim00364   Fluorobenzoate degradation psim00380   Tryptophan metabolism psim00400   Phenylalanine, tyrosine and tryptophan biosynthesis psim00401   Novobiocin biosynthesis psim00405   Phenazine biosynthesis psim00410   beta-Alanine metabolism psim00430   Taurine and hypotaurine metabolism psim00450   Selenocompound metabolism psim00460   Cyanoamino acid metabolism psim00470   D-Amino acid metabolism psim00480   Glutathione metabolism psim00500   Starch and sucrose metabolism psim00514   Other types of O-glycan biosynthesis psim00515   Mannose type O-glycan biosynthesis psim00520   Amino sugar and nucleotide sugar metabolism psim00521   Streptomycin biosynthesis psim00523   Polyketide sugar unit biosynthesis psim00525   Acarbose and validamycin biosynthesis psim00541   O-Antigen nucleotide sugar biosynthesis psim00543   Exopolysaccharide biosynthesis psim00550   Peptidoglycan biosynthesis psim00552   Teichoic acid biosynthesis psim00561   Glycerolipid metabolism psim00562   Inositol phosphate metabolism psim00564   Glycerophospholipid metabolism psim00592   alpha-Linolenic acid metabolism psim00600   Sphingolipid metabolism psim00620   Pyruvate metabolism psim00621   Dioxin degradation psim00622   Xylene degradation psim00623   Toluene degradation psim00625   Chloroalkane and chloroalkene degradation psim00626   Naphthalene degradation psim00627   Aminobenzoate degradation psim00630   Glyoxylate and dicarboxylate metabolism psim00640   Propanoate metabolism psim00643   Styrene degradation psim00650   Butanoate metabolism psim00660   C5-Branched dibasic acid metabolism psim00670   One carbon pool by folate psim00680   Methane metabolism psim00730   Thiamine metabolism psim00740   Riboflavin metabolism psim00750   Vitamin B6 metabolism psim00760   Nicotinate and nicotinamide metabolism psim00770   Pantothenate and CoA biosynthesis psim00780   Biotin metabolism psim00785   Lipoic acid metabolism psim00790   Folate biosynthesis psim00860   Porphyrin metabolism psim00900   Terpenoid backbone biosynthesis psim00903   Limonene degradation psim00907   Pinene, camphor and geraniol degradation psim00910   Nitrogen metabolism psim00920   Sulfur metabolism psim00930   Caprolactam degradation psim00946   Degradation of flavonoids psim00984   Steroid degradation psim00999   Biosynthesis of various plant secondary metabolites psim01040   Biosynthesis of unsaturated fatty acids psim01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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