PATHWAY: ptk01100 Help Entry ptk01100                    Pathway                                 Name Metabolic pathways - Pseudomonas tructae Class BRITE hierarchy Pathway map ptk01100   Metabolic pathways Module ptk_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ptk01100] ptk_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ptk01100] ptk_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ptk01100] ptk_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ptk01100] ptk_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ptk01100] ptk_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ptk01100] ptk_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ptk01100] ptk_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ptk01100] ptk_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ptk01100] ptk_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ptk01100] ptk_M00012   Glyoxylate cycle [PATH:ptk01100] ptk_M00015   Proline biosynthesis, glutamate => proline [PATH:ptk01100] ptk_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ptk01100] ptk_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ptk01100] ptk_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ptk01100] ptk_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ptk01100] ptk_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ptk01100] ptk_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ptk01100] ptk_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ptk01100] ptk_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ptk01100] ptk_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ptk01100] ptk_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ptk01100] ptk_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ptk01100] ptk_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:ptk01100] ptk_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ptk01100] ptk_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ptk01100] ptk_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ptk01100] ptk_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ptk01100] ptk_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ptk01100] ptk_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ptk01100] ptk_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ptk01100] ptk_M00063   CMP-KDO biosynthesis [PATH:ptk01100] ptk_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ptk01100] ptk_M00082   Fatty acid biosynthesis, initiation [PATH:ptk01100] ptk_M00083   Fatty acid biosynthesis, elongation [PATH:ptk01100] ptk_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ptk01100] ptk_M00087   beta-Oxidation [PATH:ptk01100] ptk_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ptk01100] ptk_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ptk01100] ptk_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ptk01100] ptk_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ptk01100] ptk_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ptk01100] ptk_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ptk01100] ptk_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ptk01100] ptk_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ptk01100] ptk_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ptk01100] ptk_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ptk01100] ptk_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ptk01100] ptk_M00149   Succinate dehydrogenase, prokaryotes [PATH:ptk01100] ptk_M00151   Cytochrome bc1 complex respiratory unit [PATH:ptk01100] ptk_M00155   Cytochrome c oxidase, prokaryotes [PATH:ptk01100] ptk_M00156   Cytochrome c oxidase, cbb3-type [PATH:ptk01100] ptk_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ptk01100] ptk_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ptk01100] ptk_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ptk01100] ptk_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ptk01100] ptk_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:ptk01100] ptk_M00417   Cytochrome o ubiquinol oxidase [PATH:ptk01100] ptk_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ptk01100] ptk_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ptk01100] ptk_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ptk01100] ptk_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ptk01100] ptk_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:ptk01100] ptk_M00555   Betaine biosynthesis, choline => betaine [PATH:ptk01100] ptk_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ptk01100] ptk_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ptk01100] ptk_M00621   Glycine cleavage system [PATH:ptk01100] ptk_M00793   dTDP-L-rhamnose biosynthesis [PATH:ptk01100] ptk_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ptk01100] ptk_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:ptk01100] ptk_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ptk01100] ptk_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ptk01100] ptk_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ptk01100] ptk_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ptk01100] ptk_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:ptk01100] ptk_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:ptk01100] ptk_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:ptk01100] ptk_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ptk01100] ptk_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ptk01100] ptk_M00970   Proline degradation, proline => glutamate [PATH:ptk01100] ptk_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:ptk01100] Organism Pseudomonas tructae [GN:ptk] Related pathway ptk00010   Glycolysis / Gluconeogenesis ptk00020   Citrate cycle (TCA cycle) ptk00030   Pentose phosphate pathway ptk00040   Pentose and glucuronate interconversions ptk00051   Fructose and mannose metabolism ptk00052   Galactose metabolism ptk00053   Ascorbate and aldarate metabolism ptk00061   Fatty acid biosynthesis ptk00071   Fatty acid degradation ptk00130   Ubiquinone and other terpenoid-quinone biosynthesis ptk00190   Oxidative phosphorylation ptk00220   Arginine biosynthesis ptk00230   Purine metabolism ptk00240   Pyrimidine metabolism ptk00250   Alanine, aspartate and glutamate metabolism ptk00260   Glycine, serine and threonine metabolism ptk00261   Monobactam biosynthesis ptk00270   Cysteine and methionine metabolism ptk00280   Valine, leucine and isoleucine degradation ptk00290   Valine, leucine and isoleucine biosynthesis ptk00300   Lysine biosynthesis ptk00310   Lysine degradation ptk00330   Arginine and proline metabolism ptk00332   Carbapenem biosynthesis ptk00340   Histidine metabolism ptk00350   Tyrosine metabolism ptk00360   Phenylalanine metabolism ptk00361   Chlorocyclohexane and chlorobenzene degradation ptk00362   Benzoate degradation ptk00364   Fluorobenzoate degradation ptk00380   Tryptophan metabolism ptk00400   Phenylalanine, tyrosine and tryptophan biosynthesis ptk00401   Novobiocin biosynthesis ptk00410   beta-Alanine metabolism ptk00430   Taurine and hypotaurine metabolism ptk00440   Phosphonate and phosphinate metabolism ptk00450   Selenocompound metabolism ptk00460   Cyanoamino acid metabolism ptk00470   D-Amino acid metabolism ptk00480   Glutathione metabolism ptk00500   Starch and sucrose metabolism ptk00520   Amino sugar and nucleotide sugar metabolism ptk00521   Streptomycin biosynthesis ptk00523   Polyketide sugar unit biosynthesis ptk00525   Acarbose and validamycin biosynthesis ptk00540   Lipopolysaccharide biosynthesis ptk00541   O-Antigen nucleotide sugar biosynthesis ptk00543   Exopolysaccharide biosynthesis ptk00550   Peptidoglycan biosynthesis ptk00552   Teichoic acid biosynthesis ptk00561   Glycerolipid metabolism ptk00562   Inositol phosphate metabolism ptk00564   Glycerophospholipid metabolism ptk00592   alpha-Linolenic acid metabolism ptk00620   Pyruvate metabolism ptk00622   Xylene degradation ptk00623   Toluene degradation ptk00625   Chloroalkane and chloroalkene degradation ptk00626   Naphthalene degradation ptk00627   Aminobenzoate degradation ptk00630   Glyoxylate and dicarboxylate metabolism ptk00633   Nitrotoluene degradation ptk00640   Propanoate metabolism ptk00643   Styrene degradation ptk00650   Butanoate metabolism ptk00660   C5-Branched dibasic acid metabolism ptk00670   One carbon pool by folate ptk00680   Methane metabolism ptk00710   Carbon fixation by Calvin cycle ptk00720   Other carbon fixation pathways ptk00730   Thiamine metabolism ptk00740   Riboflavin metabolism ptk00750   Vitamin B6 metabolism ptk00760   Nicotinate and nicotinamide metabolism ptk00770   Pantothenate and CoA biosynthesis ptk00780   Biotin metabolism ptk00785   Lipoic acid metabolism ptk00790   Folate biosynthesis ptk00860   Porphyrin metabolism ptk00900   Terpenoid backbone biosynthesis ptk00906   Carotenoid biosynthesis ptk00907   Pinene, camphor and geraniol degradation ptk00910   Nitrogen metabolism ptk00920   Sulfur metabolism ptk00930   Caprolactam degradation ptk00946   Degradation of flavonoids ptk00997   Biosynthesis of various other secondary metabolites ptk00999   Biosynthesis of various plant secondary metabolites ptk01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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